Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003889A_C01 KMC003889A_c01
(643 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_194455.1| putative protein; protein id: At4g27250.1 [Arab... 120 2e-26
gb|AAN13064.1| unknown protein [Arabidopsis thaliana] 120 2e-26
gb|AAF78071.1| dihydroflavonol-4-reductase [Allium cepa] 76 3e-13
gb|AAF81742.1|AF267172_1 dihydroflavonol 4-reductase [Dianthus p... 76 4e-13
gb|AAG01030.1| dihydroflavonol 4-reductase [Dianthus gratianopol... 76 4e-13
>ref|NP_194455.1| putative protein; protein id: At4g27250.1 [Arabidopsis thaliana]
gi|7486807|pir||T05749 hypothetical protein M4I22.60 -
Arabidopsis thaliana gi|3269286|emb|CAA19719.1| putative
protein [Arabidopsis thaliana]
gi|7269578|emb|CAB79580.1| putative protein [Arabidopsis
thaliana]
Length = 405
Score = 120 bits (300), Expect = 2e-26
Identities = 61/99 (61%), Positives = 75/99 (75%), Gaps = 4/99 (4%)
Frame = -2
Query: 642 SVKRVVFTSSISTITAKDSNGKWKPFVDECCQIQTDNVCNTKASGWVYALSKLLTEEATF 463
SVKRVVFTSSIST+TAKD N + + FVDE C+ D+V T+ASGW+Y LSKL++EE F
Sbjct: 166 SVKRVVFTSSISTLTAKDENERMRSFVDETCKAHVDHVLKTQASGWIYVLSKLVSEEEAF 225
Query: 462 KFAKENDID----ITSIVAGPFFTANVPSSVQVLLSPFT 358
++AKE +D IT+ V+GPF T VPSSVQVLLSP T
Sbjct: 226 RYAKERGMDLVSVITTTVSGPFLTPFVPSSVQVLLSPIT 264
>gb|AAN13064.1| unknown protein [Arabidopsis thaliana]
Length = 354
Score = 120 bits (300), Expect = 2e-26
Identities = 61/99 (61%), Positives = 75/99 (75%), Gaps = 4/99 (4%)
Frame = -2
Query: 642 SVKRVVFTSSISTITAKDSNGKWKPFVDECCQIQTDNVCNTKASGWVYALSKLLTEEATF 463
SVKRVVFTSSIST+TAKD N + + FVDE C+ D+V T+ASGW+Y LSKL++EE F
Sbjct: 129 SVKRVVFTSSISTLTAKDENERMRSFVDETCKAHVDHVLKTQASGWIYVLSKLVSEEEAF 188
Query: 462 KFAKENDID----ITSIVAGPFFTANVPSSVQVLLSPFT 358
++AKE +D IT+ V+GPF T VPSSVQVLLSP T
Sbjct: 189 RYAKERGMDLVSVITTTVSGPFLTPFVPSSVQVLLSPIT 227
>gb|AAF78071.1| dihydroflavonol-4-reductase [Allium cepa]
Length = 257
Score = 76.3 bits (186), Expect = 3e-13
Identities = 41/98 (41%), Positives = 59/98 (59%), Gaps = 4/98 (4%)
Frame = -2
Query: 639 VKRVVFTSSISTITAKDSNGKWKPFVDECCQIQTDNVCNTKASGWVYALSKLLTEEATFK 460
V+RVVFTSS T+ + + KP DE C D + + K +GW+Y +SK+L E+A +K
Sbjct: 40 VRRVVFTSSGGTVNVEATQ---KPVYDETCWSDLDFIRSVKMTGWMYFMSKILAEQAAWK 96
Query: 459 FAKENDIDITSI----VAGPFFTANVPSSVQVLLSPFT 358
+A EN++D SI V GPF ++P S+ LSP T
Sbjct: 97 YAAENNLDFISIIPPLVVGPFIMPSMPPSLITALSPIT 134
>gb|AAF81742.1|AF267172_1 dihydroflavonol 4-reductase [Dianthus plumarius]
Length = 257
Score = 75.9 bits (185), Expect = 4e-13
Identities = 41/98 (41%), Positives = 59/98 (59%), Gaps = 4/98 (4%)
Frame = -2
Query: 639 VKRVVFTSSISTITAKDSNGKWKPFVDECCQIQTDNVCNTKASGWVYALSKLLTEEATFK 460
V+RVVFTSS T+ + + KP DE C D + + K +GW+Y +SK+L E+A +K
Sbjct: 40 VRRVVFTSSGGTVNVEATQ---KPVYDETCWSDLDFIRSVKMTGWMYFVSKILAEQAAWK 96
Query: 459 FAKENDIDITSI----VAGPFFTANVPSSVQVLLSPFT 358
+A EN++D SI V GPF ++P S+ LSP T
Sbjct: 97 YAAENNLDFISIIPPLVVGPFIMPSMPPSLITALSPIT 134
>gb|AAG01030.1| dihydroflavonol 4-reductase [Dianthus gratianopolitanus]
Length = 353
Score = 75.9 bits (185), Expect = 4e-13
Identities = 41/98 (41%), Positives = 59/98 (59%), Gaps = 4/98 (4%)
Frame = -2
Query: 639 VKRVVFTSSISTITAKDSNGKWKPFVDECCQIQTDNVCNTKASGWVYALSKLLTEEATFK 460
V+RVVFTSS T+ + + KP DE C D + + K +GW+Y +SK+L E+A +K
Sbjct: 136 VRRVVFTSSGGTVNVEATQ---KPVYDETCWSDLDFIRSVKMTGWMYFVSKILAEQAAWK 192
Query: 459 FAKENDIDITSI----VAGPFFTANVPSSVQVLLSPFT 358
+A EN++D SI V GPF ++P S+ LSP T
Sbjct: 193 YAAENNLDFISIIPPLVVGPFIMPSMPPSLITALSPIT 230
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 478,563,279
Number of Sequences: 1393205
Number of extensions: 9500476
Number of successful extensions: 19361
Number of sequences better than 10.0: 175
Number of HSP's better than 10.0 without gapping: 18747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19262
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27007650415
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
