Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003886A_C01 KMC003886A_c01
(521 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T05363 phosphogluconate dehydrogenase (decarboxylating) (EC... 279 2e-74
ref|NP_186885.1| 6-phosphogluconate dehydrogenase, putative; pro... 269 2e-71
gb|AAK51690.1|AF307144_1 cytosolic 6-phosphogluconate dehydrogen... 268 2e-71
pir||S57786 phosphogluconate dehydrogenase (decarboxylating) (EC... 263 7e-70
dbj|BAA93024.1| ESTs D24970(R2869),AU031961(R2869) correspond to... 258 2e-68
>pir||T05363 phosphogluconate dehydrogenase (decarboxylating) (EC 1.1.1.44) -
soybean gi|2529229|dbj|BAA22812.1| 6-phosphogluconate
dehydrogenase [Glycine max]
Length = 511
Score = 279 bits (713), Expect = 2e-74
Identities = 140/148 (94%), Positives = 143/148 (96%)
Frame = +2
Query: 77 MAQPNLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPVYGY 256
MAQP+ T IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPVYGY
Sbjct: 1 MAQPS-TGIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPVYGY 59
Query: 257 HDAEAFVHSIQKPRVIIMLVKAGAPVDQTIKTLSAYMEKGDCIVDGGNEWYENTERREKA 436
HD EAFVHSIQKPRVIIMLVKAGAPVDQTIKTLSAYMEKGDCI+DGGNEWYENTERREK
Sbjct: 60 HDPEAFVHSIQKPRVIIMLVKAGAPVDQTIKTLSAYMEKGDCIIDGGNEWYENTERREKE 119
Query: 437 VAESGLLYLGMGVSGGEEGARNGPSLMP 520
VAE GLLYLG+GVSGGEEGARNGPSLMP
Sbjct: 120 VAELGLLYLGLGVSGGEEGARNGPSLMP 147
>ref|NP_186885.1| 6-phosphogluconate dehydrogenase, putative; protein id:
At3g02360.1, supported by cDNA: 34412., supported by
cDNA: gi_15983433 [Arabidopsis thaliana]
gi|10092176|gb|AAG12595.1|AC068900_1 6-phosphogluconate
dehydrogenase, putative; 13029-14489 [Arabidopsis
thaliana] gi|15983434|gb|AAL11585.1|AF424591_1
AT3g02360/F11A12_104 [Arabidopsis thaliana]
gi|21592941|gb|AAM64891.1| 6-phosphogluconate
dehydrogenase, putative [Arabidopsis thaliana]
gi|25141203|gb|AAN73296.1| At3g02360/F11A12_104
[Arabidopsis thaliana]
Length = 486
Score = 269 bits (687), Expect = 2e-71
Identities = 131/142 (92%), Positives = 139/142 (97%)
Frame = +2
Query: 95 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPVYGYHDAEAF 274
TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAK+EGNLP+YG+HD E+F
Sbjct: 6 TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFHDPESF 65
Query: 275 VHSIQKPRVIIMLVKAGAPVDQTIKTLSAYMEKGDCIVDGGNEWYENTERREKAVAESGL 454
V SIQKPRVIIMLVKAG+PVDQTIKTLSAY+EKGDCIVDGGNEWYENTERREKAVAE+G
Sbjct: 66 VKSIQKPRVIIMLVKAGSPVDQTIKTLSAYLEKGDCIVDGGNEWYENTERREKAVAENGF 125
Query: 455 LYLGMGVSGGEEGARNGPSLMP 520
LYLGMGVSGGEEGARNGPS+MP
Sbjct: 126 LYLGMGVSGGEEGARNGPSMMP 147
>gb|AAK51690.1|AF307144_1 cytosolic 6-phosphogluconate dehydrogenase [Spinacia oleracea]
Length = 483
Score = 268 bits (686), Expect = 2e-71
Identities = 133/148 (89%), Positives = 141/148 (94%)
Frame = +2
Query: 77 MAQPNLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPVYGY 256
MA P TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLP+YG+
Sbjct: 1 MAPP--TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGF 58
Query: 257 HDAEAFVHSIQKPRVIIMLVKAGAPVDQTIKTLSAYMEKGDCIVDGGNEWYENTERREKA 436
HD E+FV+SIQKPRVIIMLVKAGAPVD TIKTLSAY+EKGDCI+DGGNEWYENTERREKA
Sbjct: 59 HDPESFVNSIQKPRVIIMLVKAGAPVDATIKTLSAYLEKGDCIIDGGNEWYENTERREKA 118
Query: 437 VAESGLLYLGMGVSGGEEGARNGPSLMP 520
+ E GLLYLGMGVSGGEEGARNGPS+MP
Sbjct: 119 MEEKGLLYLGMGVSGGEEGARNGPSMMP 146
>pir||S57786 phosphogluconate dehydrogenase (decarboxylating) (EC 1.1.1.44) -
alfalfa gi|603221|gb|AAB41553.1| 6-phosphogluconate
dehydrogenase
Length = 486
Score = 263 bits (673), Expect = 7e-70
Identities = 128/145 (88%), Positives = 138/145 (94%)
Frame = +2
Query: 86 PNLTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPVYGYHDA 265
P LTRIGLAGLAVMGQNLALNIA+KGFPISVYNRTTSKVDETVERAKQEGNLP+YG+HD
Sbjct: 3 PPLTRIGLAGLAVMGQNLALNIADKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFHDP 62
Query: 266 EAFVHSIQKPRVIIMLVKAGAPVDQTIKTLSAYMEKGDCIVDGGNEWYENTERREKAVAE 445
EAFV+SI+KPRVIIMLVKAGAPV+QT KTLSAY+EKGDCI+DG NEWYENTERREK VAE
Sbjct: 63 EAFVNSIEKPRVIIMLVKAGAPVEQTTKTLSAYLEKGDCIIDGDNEWYENTERREKEVAE 122
Query: 446 SGLLYLGMGVSGGEEGARNGPSLMP 520
G+LYLGMGVSGGEEGAR GPS+MP
Sbjct: 123 LGILYLGMGVSGGEEGARRGPSMMP 147
>dbj|BAA93024.1| ESTs D24970(R2869),AU031961(R2869) correspond to a region of the
predicted gene.~Similar to Zea mays putative cytosolic
6-phosphogluconate dehydrogenase (AF061838) [Oryza
sativa (japonica cultivar-group)]
gi|19569141|gb|AAL92029.1|AF486280_1 cytosolic
6-phosphogluconate dehydrogenase [Oryza sativa]
Length = 480
Score = 258 bits (660), Expect = 2e-68
Identities = 125/143 (87%), Positives = 137/143 (95%)
Frame = +2
Query: 92 LTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPVYGYHDAEA 271
+TRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETV+RAK EGNLPVYG+HD +
Sbjct: 3 VTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVQRAKVEGNLPVYGFHDPAS 62
Query: 272 FVHSIQKPRVIIMLVKAGAPVDQTIKTLSAYMEKGDCIVDGGNEWYENTERREKAVAESG 451
FV+SIQKPRV+IMLVKAGAPVDQTI TL+A++E+GDCI+DGGNEWYENTERREKA+ E G
Sbjct: 63 FVNSIQKPRVVIMLVKAGAPVDQTIATLAAHLEQGDCIIDGGNEWYENTERREKAMEERG 122
Query: 452 LLYLGMGVSGGEEGARNGPSLMP 520
LLYLGMGVSGGEEGARNGPSLMP
Sbjct: 123 LLYLGMGVSGGEEGARNGPSLMP 145
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 478,273,612
Number of Sequences: 1393205
Number of extensions: 10612998
Number of successful extensions: 32847
Number of sequences better than 10.0: 514
Number of HSP's better than 10.0 without gapping: 31194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32487
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16731298976
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
