Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003869A_C01 KMC003869A_c01
(474 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E85440 hypothetical protein AT4g37280 [imported] - Arabidop... 90 3e-22
ref|NP_568021.1| putative protein; protein id: At4g37280.1 [Arab... 90 3e-22
ref|NP_171774.1| unknown protein; protein id: At1g02740.1 [Arabi... 77 1e-19
pir||E86157 hypothetical protein F22D16.25 - Arabidopsis thalian... 41 4e-09
dbj|BAC37546.1| unnamed protein product [Mus musculus] 51 5e-06
>pir||E85440 hypothetical protein AT4g37280 [imported] - Arabidopsis thaliana
gi|4006854|emb|CAB16772.1| putative protein [Arabidopsis
thaliana] gi|7270711|emb|CAB80394.1| putative protein
[Arabidopsis thaliana]
Length = 327
Score = 89.7 bits (221), Expect(2) = 3e-22
Identities = 39/57 (68%), Positives = 49/57 (85%)
Frame = -3
Query: 367 EHKQYSEAVADNASPSTIYGAEHLLRLFVKLPELLAYVNIDEETWTRWQQKLLDFLK 197
E +QY E++ D+ SPST+YGAEHLLRLFVKLP+L +YVN++EETW+R QQ L DFLK
Sbjct: 241 ERRQYQESIVDDTSPSTVYGAEHLLRLFVKLPDLFSYVNMEEETWSRMQQTLSDFLK 297
Score = 36.2 bits (82), Expect(2) = 3e-22
Identities = 18/29 (62%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
Frame = -2
Query: 452 IASDSI-EIPKGIRCYFDKALPMMLLNRQ 369
+ +DS+ EI KGIR YFDKALP+MLL ++
Sbjct: 212 MVTDSVAEILKGIRSYFDKALPVMLLYKK 240
>ref|NP_568021.1| putative protein; protein id: At4g37280.1 [Arabidopsis thaliana]
gi|14335028|gb|AAK59778.1| AT4g37280/C7A10_80
[Arabidopsis thaliana] gi|22655420|gb|AAM98302.1|
At4g37280/C7A10_80 [Arabidopsis thaliana]
Length = 320
Score = 89.7 bits (221), Expect(2) = 3e-22
Identities = 39/57 (68%), Positives = 49/57 (85%)
Frame = -3
Query: 367 EHKQYSEAVADNASPSTIYGAEHLLRLFVKLPELLAYVNIDEETWTRWQQKLLDFLK 197
E +QY E++ D+ SPST+YGAEHLLRLFVKLP+L +YVN++EETW+R QQ L DFLK
Sbjct: 234 ERRQYQESIVDDTSPSTVYGAEHLLRLFVKLPDLFSYVNMEEETWSRMQQTLSDFLK 290
Score = 36.2 bits (82), Expect(2) = 3e-22
Identities = 18/29 (62%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
Frame = -2
Query: 452 IASDSI-EIPKGIRCYFDKALPMMLLNRQ 369
+ +DS+ EI KGIR YFDKALP+MLL ++
Sbjct: 205 MVTDSVAEILKGIRSYFDKALPVMLLYKK 233
>ref|NP_171774.1| unknown protein; protein id: At1g02740.1 [Arabidopsis thaliana]
Length = 316
Score = 76.6 bits (187), Expect(2) = 1e-19
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = -3
Query: 373 DNEHKQYSEAVADNASPSTIYGAEHLLRLFVKLPELLAYVNIDEETWTRWQQKLLDFLK 197
+NE KQY E+V+ SPST+YGAEHLLRLFVKLPELL +VN+ EET Q +D L+
Sbjct: 236 NNERKQYEESVSGGVSPSTVYGAEHLLRLFVKLPELLVHVNMAEETLKELQDNFVDILR 294
Score = 40.8 bits (94), Expect(2) = 1e-19
Identities = 20/33 (60%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = -2
Query: 455 RIASDSIEIPKGIRCYFDKALPMMLL-NRQRTQ 360
R+ EI KG+RCYFDKALP+MLL N +R Q
Sbjct: 209 RVTDSLEEILKGLRCYFDKALPVMLLYNNERKQ 241
>pir||E86157 hypothetical protein F22D16.25 - Arabidopsis thaliana
gi|6056427|gb|AAF02891.1|AC009525_25 Unknown protein
[Arabidopsis thaliana]
Length = 204
Score = 40.8 bits (94), Expect(2) = 4e-09
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = -3
Query: 373 DNEHKQYSEAVADNASPSTIYGAEHLL 293
+NE KQY E+V+ SPST+YGAEH +
Sbjct: 168 NNERKQYEESVSGGVSPSTVYGAEHFM 194
Score = 40.8 bits (94), Expect(2) = 4e-09
Identities = 20/33 (60%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = -2
Query: 455 RIASDSIEIPKGIRCYFDKALPMMLL-NRQRTQ 360
R+ EI KG+RCYFDKALP+MLL N +R Q
Sbjct: 141 RVTDSLEEILKGLRCYFDKALPVMLLYNNERKQ 173
>dbj|BAC37546.1| unnamed protein product [Mus musculus]
Length = 221
Score = 51.2 bits (121), Expect = 5e-06
Identities = 28/59 (47%), Positives = 38/59 (63%), Gaps = 2/59 (3%)
Frame = -3
Query: 367 EHKQYSEAVADN--ASPSTIYGAEHLLRLFVKLPELLAYVNIDEETWTRWQQKLLDFLK 197
E QY+E +AD+ A S +YGA HLLRLFV++ +LAY +DE++ L DFLK
Sbjct: 136 ERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFLK 194
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 365,266,236
Number of Sequences: 1393205
Number of extensions: 6837704
Number of successful extensions: 16697
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 16426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16695
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12815311608
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
