Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003867A_C01 KMC003867A_c01
(868 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F84717 hypothetical protein At2g31190 [imported] - Arabidop... 175 7e-43
ref|NP_565718.1| expressed protein; protein id: At2g31190.1, sup... 175 7e-43
ref|NP_073581.1| hypothetical protein FLJ13868 [Homo sapiens] gi... 37 0.50
gb|AAH09308.1|AAH09308 hypothetical protein FLJ13868 [Homo sapiens] 37 0.50
gb|AAH00822.1|AAH00822 Similar to hypothetical protein FLJ13868 ... 37 0.50
>pir||F84717 hypothetical protein At2g31190 [imported] - Arabidopsis thaliana
Length = 384
Score = 175 bits (444), Expect = 7e-43
Identities = 86/144 (59%), Positives = 109/144 (74%)
Frame = -3
Query: 866 DFLKAGNVSSPTDLRYREDLLFPGRLIEDAGNVRVGRALHKAIKPSRLVELQQVFPGEKF 687
+FLK G V SP DLR++EDL+FP R I+DAGNV+VGRALHKA+KPS + L+QVF EKF
Sbjct: 240 NFLKTGKVPSPPDLRFQEDLMFPERPIQDAGNVKVGRALHKAVKPSEVQRLKQVFVEEKF 299
Query: 686 LLNRENRCIDMVLEPDATGEDALRGWLVSAYAVQIDKSSHELSASVMLQACEKMNEVFPV 507
LL+ DMVLE DATGEDALRGWLV+AY + K ++ ++ A +KMN+VF
Sbjct: 300 LLSHGKSWTDMVLEHDATGEDALRGWLVAAYVKSMTKIYNDPDDIILQDAYDKMNDVFNP 359
Query: 506 FLKELQNKGWHTDRFMDGTGSRFA 435
FL ++Q KGW+TDRF+DGTG+RFA
Sbjct: 360 FLSQVQAKGWYTDRFLDGTGTRFA 383
>ref|NP_565718.1| expressed protein; protein id: At2g31190.1, supported by cDNA:
151404. [Arabidopsis thaliana]
gi|20197897|gb|AAD20664.2| expressed protein
[Arabidopsis thaliana] gi|21553562|gb|AAM62655.1|
unknown [Arabidopsis thaliana]
Length = 433
Score = 175 bits (444), Expect = 7e-43
Identities = 86/144 (59%), Positives = 109/144 (74%)
Frame = -3
Query: 866 DFLKAGNVSSPTDLRYREDLLFPGRLIEDAGNVRVGRALHKAIKPSRLVELQQVFPGEKF 687
+FLK G V SP DLR++EDL+FP R I+DAGNV+VGRALHKA+KPS + L+QVF EKF
Sbjct: 289 NFLKTGKVPSPPDLRFQEDLMFPERPIQDAGNVKVGRALHKAVKPSEVQRLKQVFVEEKF 348
Query: 686 LLNRENRCIDMVLEPDATGEDALRGWLVSAYAVQIDKSSHELSASVMLQACEKMNEVFPV 507
LL+ DMVLE DATGEDALRGWLV+AY + K ++ ++ A +KMN+VF
Sbjct: 349 LLSHGKSWTDMVLEHDATGEDALRGWLVAAYVKSMTKIYNDPDDIILQDAYDKMNDVFNP 408
Query: 506 FLKELQNKGWHTDRFMDGTGSRFA 435
FL ++Q KGW+TDRF+DGTG+RFA
Sbjct: 409 FLSQVQAKGWYTDRFLDGTGTRFA 432
>ref|NP_073581.1| hypothetical protein FLJ13868 [Homo sapiens]
gi|10436021|dbj|BAB14730.1| unnamed protein product
[Homo sapiens]
Length = 468
Score = 36.6 bits (83), Expect = 0.50
Identities = 41/154 (26%), Positives = 74/154 (47%), Gaps = 21/154 (13%)
Frame = -3
Query: 863 FLKAGNVSSPTDLRYREDLLFPGRLIEDAGNVRVGRALHKAIKPSRLVELQQVFPG--EK 690
+L+ G V PT R + L+ G A ++ +G LH+ + S + ELQQ+ G E
Sbjct: 299 YLQRGEVLDPTAAN-RMEPLWTG--FWPAPSLSLGVPLHRLV--SSVFELQQLVEGHQES 353
Query: 689 FLL--NRENRCIDMVLEPDATGEDALR----GWLVSAYA------VQIDKSSHELSAS-- 552
+LL ++ + +VL A + LR G ++ A ++++ + + A
Sbjct: 354 YLLCWDQSQNQVQVVLNQKAGPKTILRAATHGLMLGALQGDGPLPAELEELRNRVRAGPK 413
Query: 551 -----VMLQACEKMNEVFPVFLKELQNKGWHTDR 465
V+ + E ++ +FP FLK LQ+ GW T++
Sbjct: 414 KESWVVVKETHEVLDMLFPKFLKGLQDAGWKTEK 447
>gb|AAH09308.1|AAH09308 hypothetical protein FLJ13868 [Homo sapiens]
Length = 468
Score = 36.6 bits (83), Expect = 0.50
Identities = 41/154 (26%), Positives = 74/154 (47%), Gaps = 21/154 (13%)
Frame = -3
Query: 863 FLKAGNVSSPTDLRYREDLLFPGRLIEDAGNVRVGRALHKAIKPSRLVELQQVFPG--EK 690
+L+ G V PT R + L+ G A ++ +G LH+ + S + ELQQ+ G E
Sbjct: 299 YLQRGEVLDPTAAN-RMEPLWTG--FWPAPSLSLGVPLHRLV--SSVFELQQLVEGHQES 353
Query: 689 FLL--NRENRCIDMVLEPDATGEDALR----GWLVSAYA------VQIDKSSHELSAS-- 552
+LL ++ + +VL A + LR G ++ A ++++ + + A
Sbjct: 354 YLLCWDQSQNQVQVVLNQKAGPKTILRAATHGLMLGALQGDGPLPAELEELRNRVRAGPK 413
Query: 551 -----VMLQACEKMNEVFPVFLKELQNKGWHTDR 465
V+ + E ++ +FP FLK LQ+ GW T++
Sbjct: 414 KESWVVVKETHEVLDMLFPKFLKGLQDAGWKTEK 447
>gb|AAH00822.1|AAH00822 Similar to hypothetical protein FLJ13868 [Homo sapiens]
Length = 231
Score = 36.6 bits (83), Expect = 0.50
Identities = 41/154 (26%), Positives = 74/154 (47%), Gaps = 21/154 (13%)
Frame = -3
Query: 863 FLKAGNVSSPTDLRYREDLLFPGRLIEDAGNVRVGRALHKAIKPSRLVELQQVFPG--EK 690
+L+ G V PT R + L+ G A ++ +G LH+ + S + ELQQ+ G E
Sbjct: 62 YLQRGEVLDPTAAN-RMEPLWTG--FWPAPSLSLGVPLHRLV--SSVFELQQLVEGHQES 116
Query: 689 FLL--NRENRCIDMVLEPDATGEDALR----GWLVSAYA------VQIDKSSHELSAS-- 552
+LL ++ + +VL A + LR G ++ A ++++ + + A
Sbjct: 117 YLLCWDQSQNQVQVVLNQKAGPKTILRAATHGLMLGALQGDGPLPAELEELRNRVRAGPK 176
Query: 551 -----VMLQACEKMNEVFPVFLKELQNKGWHTDR 465
V+ + E ++ +FP FLK LQ+ GW T++
Sbjct: 177 KESWVVVKETHEVLDMLFPKFLKGLQDAGWKTEK 210
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 725,395,821
Number of Sequences: 1393205
Number of extensions: 15499480
Number of successful extensions: 34695
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 33773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34684
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 46267227342
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
