KMC003861A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC003861A_C01 KMC003861A_c01
ctttttttgtttttgagcggaaaagGAAAGGTGAGTTCTTCTTATTTAGATGGATTAAAC
TCAACTGATGCAAACTTCAAAGAAACATAATTGAAAATTAAACAATTTATTGATAGTAAC
ACAGATTCAGAAGCCACCAAGAACAGTTCTGAACAGAATATAAGCATAACAGAATATATT
AATATAAAGCAGCTCAGAAGTGATCCAGTGCAGCAACAAACTCTGCAATATTTTTATCAG
ATCTTCCTCCCTCAGCAAGAGAAGTCCTGGGCCAGATTCATCCATTTGATGGCATTGCTC
TTTATTTCATTTATCTTTTCAGTCTCAATAATTTCCTTTATGCAATTCTTAATTGTTTCT
CTTCTCACTATCTCTTTCTCATCAGCAACAGCTCTGACTCCAGTTTTCCACACATCAACA
ATCAGCTTCCCATTTGTGACTTGGTCAGTCCACAGTGGCATTGCAATCACTGGAACCCCT
AAGCTCACAGATTCCAATGTGGAGTTCCAACCACAGTGTGTGAGAAAGCACCCCAAAGCT
TGATGTTTCAAGACCAGTAACTGAGGACACCATGTGACTATTAAACCCTTCTCTGTTGTC
TCCACAAATCCC


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC003861A_C01 KMC003861A_c01
         (612 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB86925.1| glucosyltransferase-7 [Vigna angularis]               167  2e-40
gb|AAF61647.1|AF190634_1 UDP-glucose:salicylic acid glucosyltran...   156  2e-39
ref|NP_172059.1| putative indole-3-acetate beta-glucosyltransfer...   145  2e-35
ref|NP_181912.1| putative glucosyltransferase; protein id: At2g4...   139  2e-33
emb|CAD40044.1| OSJNBa0052O21.29 [Oryza sativa (japonica cultiva...   138  6e-33

>dbj|BAB86925.1| glucosyltransferase-7 [Vigna angularis]
          Length = 274

 Score =  167 bits (422), Expect(2) = 2e-40
 Identities = 73/114 (64%), Positives = 93/114 (81%)
 Frame = -2

Query: 611 GFVETTEKGLIVTWCPQLLVLKHQALGCFLTHCGWNSTLESVSLGVPVIAMPLWTDQVTN 432
           GF + TEKG +VTWC QL VL H+A+GCF+THCGWNSTLE++ LGVP IA+P W+DQ TN
Sbjct: 138 GFEKKTEKGFVVTWCSQLKVLAHEAIGCFVTHCGWNSTLETLCLGVPTIAIPFWSDQSTN 197

Query: 431 GKLIVDVWKTGVRAVADEKEIVRRETIKNCIKEIIETEKINEIKSNAIKWMNLA 270
            KL+ DVWK G+RA  DEK++VRRE +K+CI+EI+E EK NE+K+NA +W  LA
Sbjct: 198 AKLMEDVWKMGIRAPFDEKKVVRREALKHCIREIMENEKGNELKNNANQWRTLA 251

 Score = 21.2 bits (43), Expect(2) = 2e-40
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 262 SLAEGGRSDKNIAEFVAALDH 200
           ++  GG S K+I EFV +  H
Sbjct: 254 AVKSGGSSHKSILEFVNSFFH 274

>gb|AAF61647.1|AF190634_1 UDP-glucose:salicylic acid glucosyltransferase [Nicotiana tabacum]
          Length = 459

 Score =  156 bits (395), Expect(2) = 2e-39
 Identities = 68/110 (61%), Positives = 90/110 (81%)
 Frame = -2

Query: 596 TEKGLIVTWCPQLLVLKHQALGCFLTHCGWNSTLESVSLGVPVIAMPLWTDQVTNGKLIV 417
           +EKGL+V+WCPQL VL+H+++GCFLTHCGWNSTLE++SLGVP+IAMP W+DQ TN KL+ 
Sbjct: 322 SEKGLVVSWCPQLQVLEHKSIGCFLTHCGWNSTLEAISLGVPMIAMPHWSDQPTNAKLVE 381

Query: 416 DVWKTGVRAVADEKEIVRRETIKNCIKEIIETEKINEIKSNAIKWMNLAQ 267
           DVW+ G+R   DEK +VRRE I+ CIK ++E +K  +I+ NA KW  LA+
Sbjct: 382 DVWEMGIRPKQDEKGLVRREVIEECIKIVMEEKKGKKIRENAKKWKELAR 431

 Score = 27.7 bits (60), Expect(2) = 2e-39
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 268 RTSLAEGGRSDKNIAEFVAAL 206
           R ++ EGG SD+NI EFV+ L
Sbjct: 431 RKAVDEGGSSDRNIEEFVSKL 451

>ref|NP_172059.1| putative indole-3-acetate beta-glucosyltransferase; protein id:
           At1g05680.1 [Arabidopsis thaliana]
           gi|25286809|pir||A86191 hypothetical protein [imported]
           - Arabidopsis thaliana
           gi|4836925|gb|AAD30627.1|AC007153_19 Similar to
           indole-3-acetate beta-glucosyltransferase [Arabidopsis
           thaliana]
          Length = 453

 Score =  145 bits (367), Expect(2) = 2e-35
 Identities = 69/113 (61%), Positives = 83/113 (73%)
 Frame = -2

Query: 602 ETTEKGLIVTWCPQLLVLKHQALGCFLTHCGWNSTLESVSLGVPVIAMPLWTDQVTNGKL 423
           E  EKGLIV+W PQL VL H+++GCFLTHCGWNSTLE +SLGVP+I MP WTDQ TN K 
Sbjct: 321 EIGEKGLIVSWSPQLDVLAHKSIGCFLTHCGWNSTLEGLSLGVPMIGMPHWTDQPTNAKF 380

Query: 422 IVDVWKTGVRAVADEKEIVRRETIKNCIKEIIETEKINEIKSNAIKWMNLAQD 264
           + DVWK GVR  A+    VRRE I   ++E++E EK  EI+ NA KW  LAQ+
Sbjct: 381 MQDVWKVGVRVKAEGDGFVRREEIMRSVEEVMEGEKGKEIRKNAEKWKVLAQE 433

 Score = 25.0 bits (53), Expect(2) = 2e-35
 Identities = 10/17 (58%), Positives = 15/17 (87%)
 Frame = -3

Query: 262 SLAEGGRSDKNIAEFVA 212
           +++EGG SDK+I EFV+
Sbjct: 434 AVSEGGSSDKSINEFVS 450

>ref|NP_181912.1| putative glucosyltransferase; protein id: At2g43840.1 [Arabidopsis
           thaliana] gi|25286795|pir||B84871 probable
           glucosyltransferase [imported] - Arabidopsis thaliana
           gi|2281086|gb|AAB64022.1| putative glucosyltransferase
           [Arabidopsis thaliana]
          Length = 449

 Score =  139 bits (349), Expect(2) = 2e-33
 Identities = 67/117 (57%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
 Frame = -2

Query: 611 GFVETTEK--GLIVTWCPQLLVLKHQALGCFLTHCGWNSTLESVSLGVPVIAMPLWTDQV 438
           GF+ET +K   L++ W PQL VL ++A+GCF+THCGWNST+E +SLGVP++AMP WTDQ 
Sbjct: 309 GFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQP 368

Query: 437 TNGKLIVDVWKTGVRAVAD-EKEIVRRETIKNCIKEIIETEKINEIKSNAIKWMNLA 270
            N K I DVWK GVR  A+ E  I +RE I+  IKE++E EK  E+K NA KW +LA
Sbjct: 369 MNAKYIQDVWKVGVRVKAEKESGICKREEIEFSIKEVMEGEKSKEMKENAGKWRDLA 425

 Score = 25.4 bits (54), Expect(2) = 2e-33
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -3

Query: 262 SLAEGGRSDKNIAEFVAAL 206
           SL+EGG +D NI EFV+ +
Sbjct: 428 SLSEGGSTDININEFVSKI 446

>emb|CAD40044.1| OSJNBa0052O21.29 [Oryza sativa (japonica cultivar-group)]
          Length = 488

 Score =  138 bits (348), Expect(2) = 6e-33
 Identities = 59/110 (53%), Positives = 81/110 (73%)
 Frame = -2

Query: 593 EKGLIVTWCPQLLVLKHQALGCFLTHCGWNSTLESVSLGVPVIAMPLWTDQVTNGKLIVD 414
           E+GLIV+WCPQL VL H+A GCFLTHCGWNST E++  GVP++AMP WTDQ T  K I  
Sbjct: 357 ERGLIVSWCPQLEVLSHKATGCFLTHCGWNSTTEAIVTGVPLLAMPQWTDQPTTAKYIES 416

Query: 413 VWKTGVRAVADEKEIVRRETIKNCIKEIIETEKINEIKSNAIKWMNLAQD 264
            W  GVR   D++ +VR+E ++ CI+E++E+E+  E + NA +WM  A++
Sbjct: 417 AWGNGVRVHRDKEGMVRKEEVERCIREVLESERKAEYRKNANRWMKKAKE 466

 Score = 24.3 bits (51), Expect(2) = 6e-33
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -3

Query: 268 RTSLAEGGRSDKNIAEFVA 212
           + ++ +GG S+KNIAEF +
Sbjct: 465 KEAMKKGGSSNKNIAEFAS 483

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 504,120,075
Number of Sequences: 1393205
Number of extensions: 10357139
Number of successful extensions: 35998
Number of sequences better than 10.0: 747
Number of HSP's better than 10.0 without gapping: 34520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35945
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24568846532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MPD090h06_f AV775946 1 528
2 MR035d11_f BP078704 23 424
3 MR049f02_f BP079800 27 409
4 GNf080c05 BP073260 93 485
5 MF058b07_f BP031336 93 613
6 MR072d11_f BP081539 104 581




Lotus japonicus
Kazusa DNA Research Institute