Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003856A_C01 KMC003856A_c01
(485 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA73905.1| JR3 protein [Arabidopsis thaliana] 45 8e-10
ref|NP_175587.1| IAA-Ala hydrolase (IAR3); protein id: At1g51760... 45 8e-10
gb|AAL59907.1| IAA-amino acid hydrolase [Arabidopsis thaliana] 44 1e-08
ref|NP_200477.1| IAA-amino acid hydrolase (gb|AAC04866.1); prote... 44 1e-08
gb|AAC49016.1| ILL2 44 1e-08
>emb|CAA73905.1| JR3 protein [Arabidopsis thaliana]
Length = 444
Score = 45.1 bits (105), Expect(2) = 8e-10
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 342 HSPYLVINEEGLPYGAALHASLAVNYL 262
HSPY +NEE LPYGA+LHAS+A YL
Sbjct: 401 HSPYFEVNEELLPYGASLHASMATRYL 427
Score = 38.9 bits (89), Expect(2) = 8e-10
Identities = 16/30 (53%), Positives = 21/30 (69%)
Frame = -2
Query: 466 HFDKPPVTASEDFSFYLKVIPGYFFFFGMQ 377
+ + P+ SEDFSFY + IPG+F F GMQ
Sbjct: 361 YVEMQPLMGSEDFSFYQQAIPGHFSFVGMQ 390
>ref|NP_175587.1| IAA-Ala hydrolase (IAR3); protein id: At1g51760.1, supported by
cDNA: gi_14030706 [Arabidopsis thaliana]
gi|25319488|pir||F96556 IAA-Ala hydrolase (IAR3)
[imported] - Arabidopsis thaliana
gi|3421384|gb|AAC32192.1| IAA-Ala hydrolase; IAA-amino
acid hydrolase [Arabidopsis thaliana]
gi|12321681|gb|AAG50883.1|AC025294_21 IAA-Ala hydrolase
(IAR3) [Arabidopsis thaliana]
gi|14030707|gb|AAK53028.1|AF375444_1 At1g51760/F19C24_4
[Arabidopsis thaliana] gi|23506081|gb|AAN28900.1|
At1g51760/F19C24_4 [Arabidopsis thaliana]
Length = 440
Score = 45.1 bits (105), Expect(2) = 8e-10
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -3
Query: 342 HSPYLVINEEGLPYGAALHASLAVNYL 262
HSPY +NEE LPYGA+LHAS+A YL
Sbjct: 397 HSPYFEVNEELLPYGASLHASMATRYL 423
Score = 38.9 bits (89), Expect(2) = 8e-10
Identities = 16/30 (53%), Positives = 21/30 (69%)
Frame = -2
Query: 466 HFDKPPVTASEDFSFYLKVIPGYFFFFGMQ 377
+ + P+ SEDFSFY + IPG+F F GMQ
Sbjct: 357 YVEMQPLMGSEDFSFYQQAIPGHFSFVGMQ 386
>gb|AAL59907.1| IAA-amino acid hydrolase [Arabidopsis thaliana]
Length = 439
Score = 44.3 bits (103), Expect(2) = 1e-08
Identities = 20/34 (58%), Positives = 25/34 (72%)
Frame = -3
Query: 342 HSPYLVINEEGLPYGAALHASLAVNYLEKYLQDG 241
HSP INE+ LPYGAA+HAS+AV YL++ G
Sbjct: 397 HSPLYRINEDVLPYGAAIHASMAVQYLKEKASKG 430
Score = 35.4 bits (80), Expect(2) = 1e-08
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -2
Query: 451 PVTASEDFSFYLKVIPGYFFFFGMQ 377
PV SEDFS++ + IPG+F GMQ
Sbjct: 363 PVMGSEDFSYFAETIPGHFSLLGMQ 387
>ref|NP_200477.1| IAA-amino acid hydrolase (gb|AAC04866.1); protein id: At5g56660.1,
supported by cDNA: gi_18175666, supported by cDNA:
gi_902790 [Arabidopsis thaliana]
gi|21264464|sp|P54970|ILL2_ARATH IAA-amino acid
hydrolase homolog 2 precursor gi|2921830|gb|AAC04866.1|
IAA-amino acid hydrolase [Arabidopsis thaliana]
gi|10176770|dbj|BAB09884.1| IAA-amino acid hydrolase
[Arabidopsis thaliana]
Length = 439
Score = 44.3 bits (103), Expect(2) = 1e-08
Identities = 20/34 (58%), Positives = 25/34 (72%)
Frame = -3
Query: 342 HSPYLVINEEGLPYGAALHASLAVNYLEKYLQDG 241
HSP INE+ LPYGAA+HAS+AV YL++ G
Sbjct: 397 HSPLYRINEDVLPYGAAIHASMAVQYLKEKASKG 430
Score = 35.4 bits (80), Expect(2) = 1e-08
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -2
Query: 451 PVTASEDFSFYLKVIPGYFFFFGMQ 377
PV SEDFS++ + IPG+F GMQ
Sbjct: 363 PVMGSEDFSYFAETIPGHFSLLGMQ 387
>gb|AAC49016.1| ILL2
Length = 439
Score = 44.3 bits (103), Expect(2) = 1e-08
Identities = 20/34 (58%), Positives = 25/34 (72%)
Frame = -3
Query: 342 HSPYLVINEEGLPYGAALHASLAVNYLEKYLQDG 241
HSP INE+ LPYGAA+HAS+AV YL++ G
Sbjct: 397 HSPLYRINEDVLPYGAAIHASMAVQYLKEKASKG 430
Score = 35.4 bits (80), Expect(2) = 1e-08
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -2
Query: 451 PVTASEDFSFYLKVIPGYFFFFGMQ 377
PV SEDFS++ + IPG+F GMQ
Sbjct: 363 PVMGSEDFSYFAETIPGHFSLLGMQ 387
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 390,031,779
Number of Sequences: 1393205
Number of extensions: 7751523
Number of successful extensions: 14657
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 14371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14657
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13980339936
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
