Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003854A_C01 KMC003854A_c01
(722 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD05164.1| putative glycerol-3-phosphate acyltransferase [Vi... 66 4e-10
sp|P30706|PLSB_PEA Glycerol-3-phosphate acyltransferase, chlorop... 66 4e-10
emb|CAB75874.1| acylation enzyme [Elaeis guineensis] 66 4e-10
dbj|BAB79529.1| glycerol-3-phosphate acyltransferase [Citrus uns... 65 7e-10
sp|Q43822|PLSB_PHAVU Glycerol-3-phosphate acyltransferase, chlor... 63 4e-09
>gb|AAD05164.1| putative glycerol-3-phosphate acyltransferase [Vicia faba]
Length = 459
Score = 66.2 bits (160), Expect = 4e-10
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = -3
Query: 720 EVYTKAWYVSVADPYNVLKSAVHGKNGLEASTPVVSLSQPW 598
+ YTKA Y SV + Y+VLKSA+HGK GL+ASTPVVSLSQPW
Sbjct: 418 DAYTKALYDSVTEQYDVLKSAIHGKKGLQASTPVVSLSQPW 458
>sp|P30706|PLSB_PEA Glycerol-3-phosphate acyltransferase, chloroplast precursor (GPAT)
gi|100044|pir||S18239 glycerol-3-phosphate
O-acyltransferase (EC 2.3.1.15) - garden pea
gi|12161|emb|CAA41769.1| glycerol-3-phosphate
acyltransferase [Pisum sativum]
Length = 457
Score = 66.2 bits (160), Expect = 4e-10
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = -3
Query: 720 EVYTKAWYVSVADPYNVLKSAVHGKNGLEASTPVVSLSQPW 598
+ YTKA Y SV + Y+VLKSA+HGK GL+ASTPVVSLSQPW
Sbjct: 416 DAYTKALYDSVTEQYDVLKSAIHGKKGLQASTPVVSLSQPW 456
>emb|CAB75874.1| acylation enzyme [Elaeis guineensis]
Length = 458
Score = 66.2 bits (160), Expect = 4e-10
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = -3
Query: 720 EVYTKAWYVSVADPYNVLKSAVHGKNGLEASTPVVSLSQPW 598
+ YTKA Y SV + Y+VLKSA+HGK GL+ASTPVVSLSQPW
Sbjct: 417 DAYTKALYDSVTEQYDVLKSAIHGKKGLQASTPVVSLSQPW 457
>dbj|BAB79529.1| glycerol-3-phosphate acyltransferase [Citrus unshiu]
Length = 469
Score = 65.5 bits (158), Expect = 7e-10
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = -3
Query: 720 EVYTKAWYVSVADPYNVLKSAVHGKNGLEASTPVVSLSQPW 598
EVYT+A+Y SV + YNVLKSA+HGK GL+AS P VSLSQPW
Sbjct: 427 EVYTQAFYNSVTEQYNVLKSAIHGKQGLKASIPSVSLSQPW 467
>sp|Q43822|PLSB_PHAVU Glycerol-3-phosphate acyltransferase, chloroplast precursor (GPAT)
gi|7433667|pir||T11819 glycerol-3-phosphate
O-acyltransferase (EC 2.3.1.15) precursor - kidney bean
gi|791098|emb|CAA56159.1| glycerol-3-phosphate
O-acyltransferase [Phaseolus vulgaris]
Length = 461
Score = 63.2 bits (152), Expect = 4e-09
Identities = 29/41 (70%), Positives = 34/41 (82%)
Frame = -3
Query: 720 EVYTKAWYVSVADPYNVLKSAVHGKNGLEASTPVVSLSQPW 598
EV++KA Y SV + YNVLKSA+ GK G EASTPVV+LSQPW
Sbjct: 420 EVFSKALYNSVTEQYNVLKSAIQGKKGFEASTPVVTLSQPW 460
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 541,706,344
Number of Sequences: 1393205
Number of extensions: 10174500
Number of successful extensions: 21924
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 21293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21917
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 33780557640
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
