Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003846A_C01 KMC003846A_c01
(598 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_178175.1| putative acetylornithine transaminase; protein ... 157 1e-37
gb|AAM63124.1| putative acetylornithine transaminase [Arabidopsi... 155 5e-37
sp|O04866|ARGD_ALNGL Acetylornithine aminotransferase, mitochond... 151 5e-36
ref|NP_243763.1| N-acetylornithine aminotransferase [Bacillus ha... 82 4e-15
gb|ZP_00044750.1| hypothetical protein [Magnetococcus sp. MC-1] 76 4e-13
>ref|NP_178175.1| putative acetylornithine transaminase; protein id: At1g80600.1,
supported by cDNA: 19586., supported by cDNA:
gi_15451027 [Arabidopsis thaliana]
gi|25406676|pir||B96838 hypothetical protein T21F11.7
[imported] - Arabidopsis thaliana
gi|6730727|gb|AAF27117.1|AC018849_5 putative
acetylornithine transaminase; 18117-19955 [Arabidopsis
thaliana] gi|15451028|gb|AAK96785.1| putative
acetylornithine transaminase [Arabidopsis thaliana]
gi|27311957|gb|AAO00944.1| putative acetylornithine
transaminase [Arabidopsis thaliana]
Length = 457
Score = 157 bits (396), Expect = 1e-37
Identities = 74/106 (69%), Positives = 92/106 (85%)
Frame = -3
Query: 596 LAVLDKISKPDFLSAVSNQGLYFKELLKQKLGGNRHVKEIRGHGLIIGIDLDVPASPLVD 417
+AV+DK+SKP FLS+VSN+G YF++LL +KLGGN HVKE+RG GLIIG++LDVPAS LVD
Sbjct: 352 IAVMDKVSKPSFLSSVSNKGRYFRDLLVKKLGGNSHVKEVRGEGLIIGVELDVPASSLVD 411
Query: 416 ACRSSGLLVLTAGKGNVVRIVPPLIITEKELEHAADILCPTLPVLD 279
ACR SGLL+LTAGKGNVVRIVPPL+I+E+E+E A +I+ L LD
Sbjct: 412 ACRDSGLLILTAGKGNVVRIVPPLVISEEEIERAVEIMSQNLTALD 457
>gb|AAM63124.1| putative acetylornithine transaminase [Arabidopsis thaliana]
Length = 457
Score = 155 bits (391), Expect = 5e-37
Identities = 73/106 (68%), Positives = 92/106 (85%)
Frame = -3
Query: 596 LAVLDKISKPDFLSAVSNQGLYFKELLKQKLGGNRHVKEIRGHGLIIGIDLDVPASPLVD 417
+AV+DK+SKP FLS+VSN+G YF++LL +KLGGN +VKE+RG GLIIG++LDVPAS LVD
Sbjct: 352 IAVMDKVSKPSFLSSVSNKGRYFRDLLVKKLGGNSYVKEVRGEGLIIGVELDVPASSLVD 411
Query: 416 ACRSSGLLVLTAGKGNVVRIVPPLIITEKELEHAADILCPTLPVLD 279
ACR SGLL+LTAGKGNVVRIVPPL+I+E+E+E A +I+ L LD
Sbjct: 412 ACRDSGLLILTAGKGNVVRIVPPLVISEEEIERAVEIMAQNLTALD 457
>sp|O04866|ARGD_ALNGL Acetylornithine aminotransferase, mitochondrial precursor (ACOAT)
(Acetylornithine transaminase) (AOTA)
gi|1944511|emb|CAA69936.1| acetylornithine
aminotransferase [Alnus glutinosa]
Length = 451
Score = 151 bits (382), Expect = 5e-36
Identities = 77/106 (72%), Positives = 90/106 (84%)
Frame = -3
Query: 596 LAVLDKISKPDFLSAVSNQGLYFKELLKQKLGGNRHVKEIRGHGLIIGIDLDVPASPLVD 417
L VLDKI +P FL++VS +G YFKE+L KLGGN HV+E+RG GLI+GI+LDV ASPLV+
Sbjct: 343 LTVLDKILRPGFLASVSKKGHYFKEMLINKLGGNSHVREVRGVGLIVGIELDVSASPLVN 402
Query: 416 ACRSSGLLVLTAGKGNVVRIVPPLIITEKELEHAADILCPTLPVLD 279
AC +SGLLVLTAGKGNVVRIVPPLIITE+ELE AA+IL LP LD
Sbjct: 403 ACLNSGLLVLTAGKGNVVRIVPPLIITEQELEKAAEILLQCLPALD 448
>ref|NP_243763.1| N-acetylornithine aminotransferase [Bacillus halodurans]
gi|28376948|sp|Q9K8V5|ARGD_BACHD Acetylornithine
aminotransferase (ACOAT) gi|25287226|pir||A84012
N-acetylornithine aminotransferase argD [imported] -
Bacillus halodurans (strain C-125)
gi|10175519|dbj|BAB06616.1| N-acetylornithine
aminotransferase [Bacillus halodurans]
Length = 384
Score = 82.4 bits (202), Expect = 4e-15
Identities = 47/108 (43%), Positives = 66/108 (60%)
Frame = -3
Query: 593 AVLDKISKPDFLSAVSNQGLYFKELLKQKLGGNRHVKEIRGHGLIIGIDLDVPASPLVDA 414
AVL ++ +P+FL AV +G L + L G VKEIRG+GL++GI+L +P +
Sbjct: 278 AVLTEVFQPNFLQAVQEKGKQLLSGLNEALSGLEIVKEIRGNGLLVGIELQEEGAPFIKQ 337
Query: 413 CRSSGLLVLTAGKGNVVRIVPPLIITEKELEHAADILCPTLPVLDASS 270
R GLLVL AG NV+R++PPL++T +EL A L VLD +S
Sbjct: 338 LREKGLLVLNAGP-NVIRLLPPLVVTSEELHEAVTQL---KEVLDQAS 381
>gb|ZP_00044750.1| hypothetical protein [Magnetococcus sp. MC-1]
Length = 397
Score = 75.9 bits (185), Expect = 4e-13
Identities = 39/98 (39%), Positives = 58/98 (58%)
Frame = -3
Query: 596 LAVLDKISKPDFLSAVSNQGLYFKELLKQKLGGNRHVKEIRGHGLIIGIDLDVPASPLVD 417
LA LD + PDFL V +G YF L+Q G R VK+IRG GL++ ++L+ P +
Sbjct: 293 LATLDVMLAPDFLPTVQARGDYFMNALRQLAQGRRMVKQIRGRGLMVAMELNAPGEEVAS 352
Query: 416 ACRSSGLLVLTAGKGNVVRIVPPLIITEKELEHAADIL 303
S GLL+ G V+R +PPL+++E+E++ IL
Sbjct: 353 IALSRGLLI-NCCMGTVLRFLPPLVVSEQEIDQGLAIL 389
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 508,853,102
Number of Sequences: 1393205
Number of extensions: 10686265
Number of successful extensions: 28081
Number of sequences better than 10.0: 382
Number of HSP's better than 10.0 without gapping: 27152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27921
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
