Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003837A_C01 KMC003837A_c01
(644 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_187434.1| putative heat-shock protein; protein id: At3g07... 189 4e-47
emb|CAA72515.1| heat shock protein [Arabidopsis thaliana] 178 6e-44
ref|NP_178487.1| putative heat shock protein; protein id: At2g04... 178 6e-44
gb|AAM19795.1| At2g04030/F3C11.14 [Arabidopsis thaliana] 178 6e-44
pir||S49340 heat-shock protein, 82K, precursor - rye gi|556673|e... 167 1e-40
>ref|NP_187434.1| putative heat-shock protein; protein id: At3g07770.1 [Arabidopsis
thaliana] gi|6466963|gb|AAF13098.1|AC009176_25 putative
heat-shock protein [Arabidopsis thaliana]
gi|6648189|gb|AAF21187.1|AC013483_11 putative heat-shock
protein [Arabidopsis thaliana]
Length = 803
Score = 189 bits (479), Expect = 4e-47
Identities = 92/127 (72%), Positives = 113/127 (88%), Gaps = 4/127 (3%)
Frame = -1
Query: 644 KFWENYGKHLKLGCIEDHENHKRIAPLLRFFSSKSEEELISLDEYVENMKPDQKDIYYVA 465
KFW+N+GKHLKLGCIED ENHKRIAPLLRFFSS+SE ++ISLDEYVENMKP+QK IY++A
Sbjct: 502 KFWDNFGKHLKLGCIEDRENHKRIAPLLRFFSSQSENDMISLDEYVENMKPEQKAIYFIA 561
Query: 464 ADSVSSAKSSPYVEKLAEKDLEVLFLVEDPIDEVAIQNLKSYMELNFVDIGKEDLVL--- 294
+DS++SAK++P++EK+ EK LEVL+LVE PIDEVA+Q+LK+Y E +FVDI KEDL L
Sbjct: 562 SDSITSAKNAPFLEKMLEKGLEVLYLVE-PIDEVAVQSLKAYKEKDFVDISKEDLDLGNM 620
Query: 293 -GDKNEE 276
GDKNEE
Sbjct: 621 SGDKNEE 627
>emb|CAA72515.1| heat shock protein [Arabidopsis thaliana]
Length = 768
Score = 178 bits (451), Expect = 6e-44
Identities = 87/122 (71%), Positives = 105/122 (85%)
Frame = -1
Query: 644 KFWENYGKHLKLGCIEDHENHKRIAPLLRFFSSKSEEELISLDEYVENMKPDQKDIYYVA 465
KFWEN+G+ LKLGCIED NHKRI PLLRFFSSK+EEEL SLD+Y+ENM +QK IYY+A
Sbjct: 467 KFWENFGRFLKLGCIEDTGNHKRITPLLRFFSSKNEEELTSLDDYIENMGENQKAIYYLA 526
Query: 464 ADSVSSAKSSPYVEKLAEKDLEVLFLVEDPIDEVAIQNLKSYMELNFVDIGKEDLVLGDK 285
DS+ SAKS+P++EKL +KD+EVL+LVE PIDEVAIQNL++Y E FVDI KEDL LGD+
Sbjct: 527 TDSLKSAKSAPFLEKLIQKDIEVLYLVE-PIDEVAIQNLQTYKEKKFVDISKEDLELGDE 585
Query: 284 NE 279
+E
Sbjct: 586 DE 587
>ref|NP_178487.1| putative heat shock protein; protein id: At2g04030.1, supported by
cDNA: gi_15450722, supported by cDNA: gi_16930684,
supported by cDNA: gi_20453105 [Arabidopsis thaliana]
gi|25295988|pir||H84453 probable heat shock protein
[imported] - Arabidopsis thaliana
gi|4914387|gb|AAD32922.1| putative heat shock protein
[Arabidopsis thaliana] gi|15450723|gb|AAK96633.1|
At2g04030/F3C11.14 [Arabidopsis thaliana]
gi|16930685|gb|AAL32008.1|AF436826_1 At2g04030/F3C11.14
[Arabidopsis thaliana] gi|25090168|gb|AAN72245.1|
At2g04030/F3C11.14 [Arabidopsis thaliana]
Length = 780
Score = 178 bits (451), Expect = 6e-44
Identities = 87/122 (71%), Positives = 105/122 (85%)
Frame = -1
Query: 644 KFWENYGKHLKLGCIEDHENHKRIAPLLRFFSSKSEEELISLDEYVENMKPDQKDIYYVA 465
KFWEN+G+ LKLGCIED NHKRI PLLRFFSSK+EEEL SLD+Y+ENM +QK IYY+A
Sbjct: 479 KFWENFGRFLKLGCIEDTGNHKRITPLLRFFSSKNEEELTSLDDYIENMGENQKAIYYLA 538
Query: 464 ADSVSSAKSSPYVEKLAEKDLEVLFLVEDPIDEVAIQNLKSYMELNFVDIGKEDLVLGDK 285
DS+ SAKS+P++EKL +KD+EVL+LVE PIDEVAIQNL++Y E FVDI KEDL LGD+
Sbjct: 539 TDSLKSAKSAPFLEKLIQKDIEVLYLVE-PIDEVAIQNLQTYKEKKFVDISKEDLELGDE 597
Query: 284 NE 279
+E
Sbjct: 598 DE 599
>gb|AAM19795.1| At2g04030/F3C11.14 [Arabidopsis thaliana]
Length = 780
Score = 178 bits (451), Expect = 6e-44
Identities = 87/122 (71%), Positives = 105/122 (85%)
Frame = -1
Query: 644 KFWENYGKHLKLGCIEDHENHKRIAPLLRFFSSKSEEELISLDEYVENMKPDQKDIYYVA 465
KFWEN+G+ LKLGCIED NHKRI PLLRFFSSK+EEEL SLD+Y+ENM +QK IYY+A
Sbjct: 479 KFWENFGRFLKLGCIEDTGNHKRITPLLRFFSSKNEEELTSLDDYIENMGENQKAIYYLA 538
Query: 464 ADSVSSAKSSPYVEKLAEKDLEVLFLVEDPIDEVAIQNLKSYMELNFVDIGKEDLVLGDK 285
DS+ SAKS+P++EKL +KD+EVL+LVE PIDEVAIQNL++Y E FVDI KEDL LGD+
Sbjct: 539 TDSLKSAKSAPFLEKLIQKDIEVLYLVE-PIDEVAIQNLQTYKEKKFVDISKEDLELGDE 597
Query: 284 NE 279
+E
Sbjct: 598 DE 599
>pir||S49340 heat-shock protein, 82K, precursor - rye gi|556673|emb|CAA82945.1|
heat-shock protein [Secale cereale]
Length = 781
Score = 167 bits (422), Expect = 1e-40
Identities = 81/123 (65%), Positives = 104/123 (83%)
Frame = -1
Query: 644 KFWENYGKHLKLGCIEDHENHKRIAPLLRFFSSKSEEELISLDEYVENMKPDQKDIYYVA 465
KF E++GK +KLGCIED N KR+APLLRF+SSK+E +LISLD+YVENM QK IYY+A
Sbjct: 479 KFGESFGKFMKLGCIEDSGNQKRLAPLLRFYSSKNETDLISLDQYVENMPETQKAIYYIA 538
Query: 464 ADSVSSAKSSPYVEKLAEKDLEVLFLVEDPIDEVAIQNLKSYMELNFVDIGKEDLVLGDK 285
DS+ SAK++P++EKL +KD+EVL+L+E PIDEVAIQNL++Y E FVDI KEDL LGD+
Sbjct: 539 TDSLQSAKTAPFLEKLLQKDIEVLYLIE-PIDEVAIQNLQTYKEKKFVDISKEDLELGDE 597
Query: 284 NEE 276
+E+
Sbjct: 598 DED 600
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 511,490,725
Number of Sequences: 1393205
Number of extensions: 10420842
Number of successful extensions: 29955
Number of sequences better than 10.0: 351
Number of HSP's better than 10.0 without gapping: 28338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29686
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27291941472
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
