KMC003836A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC003836A_C01 KMC003836A_c01
cagaaagctttcaaggtttATTGAAATGCAAATTTATTTGATTTTAAGGTTGATTGTTCA
ACAATTTCAAGTACATTGCACAAAACAAAACAAGGAGCACAACCTACCTAGTACAGGGGA
TTGCACACTGAAGCTATGCTTATGAACTCTTCATCTGATTCCAGTGCCGCCATTGTTTCC
GGCAAAAGACACACTTCTAAATCTACACTTCCCCCTCCTTCTCTACCTGGATATGAAGTC
ACCTTCCCATCACTCTTGTTTGCATAACCACTTCTAACCGCCACAGCTTTCCCAATTCCA
AATTCATTCCCATACATGTTGAACCTCGGTGAACTACCCATCATCACAATATTCGGTTCC
AGAAACAGATCAAGTCGATACACCATCGGAGACTGCAACCACTCTTTAACATACTTCTGC
ACCGCCGCATCGCCGTGGTTCGCAACCGCCAGATGCAGCTTCCATGCTGCCCATCCAAGA
TCCTTCTCAAGAACCTCCCCTGCTTTT


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC003836A_C01 KMC003836A_c01
         (507 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_199097.1| N-hydroxycinnamoyl benzoyltransferase-like prot...   174  5e-43
ref|NP_196402.1| proanthranilate N-benzoyltransferase -like prot...   154  4e-37
ref|NP_196404.1| N-hydroxycinnamoyl benzoyltransferase - like pr...   149  1e-35
ref|NP_196403.1| N-hydroxycinnamoyl benzoyltransferase - like pr...   149  2e-35
gb|AAM73656.1|AF390211_1 AER [Nicotiana tabacum]                      131  5e-30

>ref|NP_199097.1| N-hydroxycinnamoyl benzoyltransferase-like protein; protein id:
           At5g42830.1 [Arabidopsis thaliana]
           gi|9758571|dbj|BAB09184.1|
           N-hydroxycinnamoyl/benzoyltransferase-like protein
           [Arabidopsis thaliana]
          Length = 450

 Score =  174 bits (441), Expect = 5e-43
 Identities = 82/127 (64%), Positives = 101/127 (78%)
 Frame = -2

Query: 506 KAGEVLEKDLGWAAWKLHLAVANHGDAAVQKYVKEWLQSPMVYRLDLFLEPNIVMMGSSP 327
           KAGE+LE DLG+AA K+H AVA H    V + + +WL+SP +Y +D   EP  VMMGSSP
Sbjct: 324 KAGELLENDLGFAALKVHQAVAEHTSEKVSQMIDQWLKSPYIYHIDRLFEPMSVMMGSSP 383

Query: 326 RFNMYGNEFGIGKAVAVRSGYANKSDGKVTSYPGREGGGSVDLEVCLLPETMAALESDEE 147
           RFN YG EFG+GK V +RSGYA+K DGKV++YPGREGGGS+DLEVCL+PE M ALESDEE
Sbjct: 384 RFNKYGCEFGLGKGVTLRSGYAHKFDGKVSAYPGREGGGSIDLEVCLVPEFMEALESDEE 443

Query: 146 FISIASV 126
           F+S+ S+
Sbjct: 444 FMSLVSL 450

>ref|NP_196402.1| proanthranilate N-benzoyltransferase -like protein; protein id:
           At5g07850.1 [Arabidopsis thaliana]
           gi|11358632|pir||T45610 proanthranilate
           N-benzoyltransferase-like protein - Arabidopsis thaliana
           gi|6562299|emb|CAB62597.1| proanthranilate
           N-benzoyltransferase-like protein [Arabidopsis thaliana]
           gi|10176719|dbj|BAB09949.1| anthranilate
           N-hydroxycinnamoyl/benzoyltransferase-like protein
           [Arabidopsis thaliana]
          Length = 456

 Score =  154 bits (390), Expect = 4e-37
 Identities = 74/125 (59%), Positives = 94/125 (75%)
 Frame = -2

Query: 503 AGEVLEKDLGWAAWKLHLAVANHGDAAVQKYVKEWLQSPMVYRLDLFLEPNIVMMGSSPR 324
           +GE+LE DLGWAA K+H AV  +    V + +K WL+S  V+ L+  L   +V +GSSPR
Sbjct: 329 SGELLENDLGWAALKMHEAVIGNTSEVVSETIKNWLKSSYVFHLEKLLGAMVVHIGSSPR 388

Query: 323 FNMYGNEFGIGKAVAVRSGYANKSDGKVTSYPGREGGGSVDLEVCLLPETMAALESDEEF 144
           F MY  EFG+GKAVAVRSGY  K DGK+++Y GREGGG++DLEVCLLPE M ALESD+EF
Sbjct: 389 FKMYECEFGMGKAVAVRSGYGGKFDGKISAYAGREGGGTIDLEVCLLPEFMEALESDQEF 448

Query: 143 ISIAS 129
           +S+ S
Sbjct: 449 MSVVS 453

>ref|NP_196404.1| N-hydroxycinnamoyl benzoyltransferase - like protein; protein id:
           At5g07870.1 [Arabidopsis thaliana]
           gi|11358571|pir||T45612
           N-hydroxycinnamoyl/benzoyltransferase-like protein -
           Arabidopsis thaliana gi|6562301|emb|CAB62599.1|
           N-hydroxycinnamoyl/benzoyltransferase-like protein
           [Arabidopsis thaliana] gi|10176721|dbj|BAB09951.1|
           N-hydroxycinnamoyl/benzoyltransferase-like protein
           [Arabidopsis thaliana]
          Length = 464

 Score =  149 bits (377), Expect = 1e-35
 Identities = 73/126 (57%), Positives = 90/126 (70%)
 Frame = -2

Query: 506 KAGEVLEKDLGWAAWKLHLAVANHGDAAVQKYVKEWLQSPMVYRLDLFLEPNIVMMGSSP 327
           K G +LE + GW A KLH AV  H    +   + + L+SP+  +       NIV MGSSP
Sbjct: 336 KIGNLLENEFGWIALKLHQAVTEHTGEKISYEIDQMLKSPLPLQAYRLSNLNIVHMGSSP 395

Query: 326 RFNMYGNEFGIGKAVAVRSGYANKSDGKVTSYPGREGGGSVDLEVCLLPETMAALESDEE 147
           RFN YG+EFG+GKAVAVRSGY  K DGKV++YPGR+GG S+DLEVCLLPE M ALESD+E
Sbjct: 396 RFNKYGSEFGMGKAVAVRSGYGGKYDGKVSAYPGRQGGASIDLEVCLLPEFMEALESDQE 455

Query: 146 FISIAS 129
           F+S+ S
Sbjct: 456 FMSLVS 461

>ref|NP_196403.1| N-hydroxycinnamoyl benzoyltransferase - like protein; protein id:
           At5g07860.1, supported by cDNA: gi_17065195 [Arabidopsis
           thaliana] gi|11358570|pir||T45611
           N-hydroxycinnamoyl/benzoyltransferase-like protein -
           Arabidopsis thaliana gi|6562300|emb|CAB62598.1|
           N-hydroxycinnamoyl/benzoyltransferase-like protein
           [Arabidopsis thaliana] gi|10176720|dbj|BAB09950.1|
           N-hydroxycinnamoyl/benzoyltransferase-like protein
           [Arabidopsis thaliana] gi|17065196|gb|AAL32752.1|
           N-hydroxycinnamoyl/benzoyltransferase-like protein
           [Arabidopsis thaliana] gi|23197844|gb|AAN15449.1|
           N-hydroxycinnamoyl/benzoyltransferase-like protein
           [Arabidopsis thaliana]
          Length = 454

 Score =  149 bits (375), Expect = 2e-35
 Identities = 74/124 (59%), Positives = 91/124 (72%)
 Frame = -2

Query: 500 GEVLEKDLGWAAWKLHLAVANHGDAAVQKYVKEWLQSPMVYRLDLFLEPNIVMMGSSPRF 321
           G++LE + G AA KLH AV  H    +   +  WL++ +  +LD F  PNIV MGSSPRF
Sbjct: 328 GDLLENEFGCAALKLHQAVTEHTGEKISADMDRWLKAHL--KLDGFFSPNIVHMGSSPRF 385

Query: 320 NMYGNEFGIGKAVAVRSGYANKSDGKVTSYPGREGGGSVDLEVCLLPETMAALESDEEFI 141
           N YG+EFG+GKAVAVRSGY  K DGKV++YPGREGG S+DLEVCL PE M ALE D+EF+
Sbjct: 386 NKYGSEFGMGKAVAVRSGYGGKYDGKVSAYPGREGGASIDLEVCLPPECMEALELDQEFM 445

Query: 140 SIAS 129
           S+ S
Sbjct: 446 SLVS 449

>gb|AAM73656.1|AF390211_1 AER [Nicotiana tabacum]
          Length = 465

 Score =  131 bits (329), Expect = 5e-30
 Identities = 66/123 (53%), Positives = 86/123 (69%)
 Frame = -2

Query: 497 EVLEKDLGWAAWKLHLAVANHGDAAVQKYVKEWLQSPMVYRLDLFLEPNIVMMGSSPRFN 318
           E+L  DL W+A  LH  V  H DA V++ VK+W  +P ++ L  F +  ++ MGSSPRF 
Sbjct: 344 ELLTNDLNWSANLLHQNVVAHDDATVRRGVKDWESNPRLFPLGNF-DGAMITMGSSPRFP 402

Query: 317 MYGNEFGIGKAVAVRSGYANKSDGKVTSYPGREGGGSVDLEVCLLPETMAALESDEEFIS 138
           MY N+FG G+ +AVRSG ANK DGK++++PGREG G+VDLEV L PETMA LE D EF+ 
Sbjct: 403 MYDNDFGWGRPLAVRSGMANKFDGKISAFPGREGNGTVDLEVVLAPETMAGLEEDMEFMQ 462

Query: 137 IAS 129
             S
Sbjct: 463 YVS 465

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 477,069,464
Number of Sequences: 1393205
Number of extensions: 11179551
Number of successful extensions: 33263
Number of sequences better than 10.0: 141
Number of HSP's better than 10.0 without gapping: 30845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33090
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15652649358
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MR083g01_f BP082410 1 470
2 MR100c01_f BP083636 20 509
3 GNf078d12 BP073132 24 421
4 MWL062a05_f AV769655 24 452




Lotus japonicus
Kazusa DNA Research Institute