Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003828A_C01 KMC003828A_c01
(678 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD31713.1| epoxide hydrolase [Cicer arietinum] 172 4e-42
gb|AAM28292.1| epoxide hydrolase [Ananas comosus] 145 6e-34
dbj|BAA84627.1| unnamed protein product [Oryza sativa (japonica ... 140 1e-32
dbj|BAA84626.1| unnamed protein product [Oryza sativa (japonica ... 138 6e-32
gb|AAO27849.1|AF482450_1 soluble epoxide hydrolase [Euphorbia la... 128 6e-29
>emb|CAD31713.1| epoxide hydrolase [Cicer arietinum]
Length = 275
Score = 172 bits (436), Expect = 4e-42
Identities = 86/154 (55%), Positives = 102/154 (65%)
Frame = -2
Query: 677 SWLSQEDVAYYASKFQKTGFTGGLNYYRNLNL*YPI*FLSFPSCNLDDQ*MIFYVV*ICI 498
SWL++ D+AY+ SKF+KTGFTGGLNYYRNLNL
Sbjct: 163 SWLTEADLAYFVSKFEKTGFTGGLNYYRNLNL---------------------------- 194
Query: 497 SCTC**HIHSCIFRNWELAAAWTGAQVKVPVKFITGDLDVVYTSLGMKDYINSGAFKRDV 318
NWEL A W GA+V VPVKFITG+LD+VYTSL MK+YI+ G FK DV
Sbjct: 195 --------------NWELMAPWRGAKVYVPVKFITGELDMVYTSLNMKEYIHGGGFKEDV 240
Query: 317 PNLEEVVIQEGVAHFNNQEAAEEVTNHIYDFIKK 216
PNLEEV++Q+GVAHFNNQEAAEE++NHIY+FIKK
Sbjct: 241 PNLEEVIVQKGVAHFNNQEAAEEISNHIYEFIKK 274
>gb|AAM28292.1| epoxide hydrolase [Ananas comosus]
Length = 318
Score = 145 bits (365), Expect = 6e-34
Identities = 75/154 (48%), Positives = 91/154 (58%)
Frame = -2
Query: 677 SWLSQEDVAYYASKFQKTGFTGGLNYYRNLNL*YPI*FLSFPSCNLDDQ*MIFYVV*ICI 498
SWLS+ED+ YYASKF+KTGFTGG+NYYR +NL
Sbjct: 206 SWLSEEDLDYYASKFEKTGFTGGMNYYRCMNL---------------------------- 237
Query: 497 SCTC**HIHSCIFRNWELAAAWTGAQVKVPVKFITGDLDVVYTSLGMKDYINSGAFKRDV 318
NWEL A W GA+++VP KFI GDLD+ Y ++DYI+ G FK +V
Sbjct: 238 --------------NWELTAPWAGAKIQVPTKFIVGDLDLTYHYPNIQDYIHKGGFKNEV 283
Query: 317 PNLEEVVIQEGVAHFNNQEAAEEVTNHIYDFIKK 216
P LEEVV+ EGV HF QE AEEVT+HIY+FIKK
Sbjct: 284 PLLEEVVVLEGVGHFIQQERAEEVTDHIYNFIKK 317
>dbj|BAA84627.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
gi|6016859|dbj|BAA85202.1| unnamed protein product
[Oryza sativa (japonica cultivar-group)]
Length = 290
Score = 140 bits (354), Expect = 1e-32
Identities = 71/156 (45%), Positives = 88/156 (55%)
Frame = -2
Query: 674 WLSQEDVAYYASKFQKTGFTGGLNYYRNLNL*YPI*FLSFPSCNLDDQ*MIFYVV*ICIS 495
WLS+ED++YYA KF KTGFTGG NYYR
Sbjct: 177 WLSEEDISYYADKFGKTGFTGGFNYYR--------------------------------- 203
Query: 494 CTC**HIHSCIFRNWELAAAWTGAQVKVPVKFITGDLDVVYTSLGMKDYINSGAFKRDVP 315
CI +WEL A WTGA + VP+KFI GDLD+ Y + G+KDYI+ G FK +VP
Sbjct: 204 ---------CIDLDWELTAPWTGALINVPIKFIVGDLDLTYNTPGVKDYIHKGGFKANVP 254
Query: 314 NLEEVVIQEGVAHFNNQEAAEEVTNHIYDFIKKLLI 207
NLE+VV+ EGV HF NQE +EV+ HI +F K L+
Sbjct: 255 NLEDVVVLEGVGHFINQEKPDEVSEHICEFFSKFLM 290
>dbj|BAA84626.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
gi|6016858|dbj|BAA85201.1| unnamed protein product
[Oryza sativa (japonica cultivar-group)]
Length = 322
Score = 138 bits (348), Expect = 6e-32
Identities = 72/154 (46%), Positives = 85/154 (54%)
Frame = -2
Query: 677 SWLSQEDVAYYASKFQKTGFTGGLNYYRNLNL*YPI*FLSFPSCNLDDQ*MIFYVV*ICI 498
+WLS+ED++YYA KF+KTGFTGGLNYYR
Sbjct: 210 AWLSEEDISYYAEKFEKTGFTGGLNYYR-------------------------------- 237
Query: 497 SCTC**HIHSCIFRNWELAAAWTGAQVKVPVKFITGDLDVVYTSLGMKDYINSGAFKRDV 318
CI NWEL A WTG +KVP KFI GD D+ Y G+KDYI+ G K V
Sbjct: 238 ----------CIDLNWELTAPWTGVPIKVPTKFIVGDQDLTYNIPGVKDYIHKGGLKACV 287
Query: 317 PNLEEVVIQEGVAHFNNQEAAEEVTNHIYDFIKK 216
PNLE+VVI EGVAHF NQE +EV++HI F K
Sbjct: 288 PNLEDVVIMEGVAHFINQEKPDEVSDHICGFFSK 321
>gb|AAO27849.1|AF482450_1 soluble epoxide hydrolase [Euphorbia lagascae]
Length = 321
Score = 128 bits (322), Expect = 6e-29
Identities = 67/154 (43%), Positives = 84/154 (54%)
Frame = -2
Query: 677 SWLSQEDVAYYASKFQKTGFTGGLNYYRNLNL*YPI*FLSFPSCNLDDQ*MIFYVV*ICI 498
SWLSQ+D+ YY SK+ K GF+GGLNYYR L+L
Sbjct: 209 SWLSQDDINYYVSKYNKKGFSGGLNYYRCLDL---------------------------- 240
Query: 497 SCTC**HIHSCIFRNWELAAAWTGAQVKVPVKFITGDLDVVYTSLGMKDYINSGAFKRDV 318
NWEL A WTG Q+KVPVKFI GD D Y G+K++I++G K+ V
Sbjct: 241 --------------NWELTAPWTGVQIKVPVKFIVGDQDATYHLPGVKEFIHNGGLKKHV 286
Query: 317 PNLEEVVIQEGVAHFNNQEAAEEVTNHIYDFIKK 216
P L+E+VI EG AHF QE EE++ HI DF +K
Sbjct: 287 PFLQEIVILEGAAHFLQQEKPEEISAHILDFFEK 320
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 548,490,135
Number of Sequences: 1393205
Number of extensions: 11093219
Number of successful extensions: 24082
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 23266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24071
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29987172312
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
