Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003826A_C01 KMC003826A_c01
(657 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_568315.1| expressed protein; protein id: At5g15460.1, sup... 80 2e-14
ref|NP_186754.1| expressed protein; protein id: At3g01050.1 [Ara... 79 4e-14
ref|NP_173624.1| expressed protein; protein id: At1g22050.1 [Ara... 71 1e-11
pir||T51524 hypothetical protein T20K14_70 - Arabidopsis thalian... 65 1e-09
gb|AAD00119.1| NTGP5 [Nicotiana tabacum] 64 2e-09
>ref|NP_568315.1| expressed protein; protein id: At5g15460.1, supported by cDNA:
250561. [Arabidopsis thaliana]
gi|21554321|gb|AAM63426.1| NTGP5 [Arabidopsis thaliana]
gi|28973721|gb|AAO64177.1| unknown protein [Arabidopsis
thaliana]
Length = 124
Score = 80.5 bits (197), Expect = 2e-14
Identities = 38/66 (57%), Positives = 51/66 (76%), Gaps = 3/66 (4%)
Frame = -1
Query: 657 VKDMKLISAGKILDNNRTVGECQSPLCDAPDTVTTMHVVVQPPTTEKE---KKAASETKQ 487
VKD+KLISAG+IL+NN+TVG+C+SP+ + VTTMHV++Q TEKE KK + KQ
Sbjct: 53 VKDVKLISAGRILENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEKEKKKKKPKGDLKQ 112
Query: 486 NKCLCV 469
NKC+C+
Sbjct: 113 NKCVCL 118
>ref|NP_186754.1| expressed protein; protein id: At3g01050.1 [Arabidopsis thaliana]
gi|6714483|gb|AAF26169.1|AC008261_26 unknown protein
[Arabidopsis thaliana]
Length = 117
Score = 79.3 bits (194), Expect = 4e-14
Identities = 34/65 (52%), Positives = 50/65 (76%)
Frame = -1
Query: 657 VKDMKLISAGKILDNNRTVGECQSPLCDAPDTVTTMHVVVQPPTTEKEKKAASETKQNKC 478
VK++KLISAGK+L+N++TV + +SP+ + VTTMHV++Q P TEKEKK + K NKC
Sbjct: 53 VKEVKLISAGKVLENSKTVKDYRSPVSNLAGAVTTMHVIIQAPVTEKEKKPKGDPKMNKC 112
Query: 477 LCVIL 463
+C ++
Sbjct: 113 VCSVM 117
>ref|NP_173624.1| expressed protein; protein id: At1g22050.1 [Arabidopsis thaliana]
gi|26452618|dbj|BAC43392.1| unknown protein [Arabidopsis
thaliana] gi|28973097|gb|AAO63873.1| unknown protein
[Arabidopsis thaliana]
Length = 119
Score = 70.9 bits (172), Expect = 1e-11
Identities = 33/67 (49%), Positives = 47/67 (69%), Gaps = 2/67 (2%)
Frame = -1
Query: 657 VKDMKLISAGKILDNNRTVGECQSPLCDAPDTVTTMHVVVQPPTTEK--EKKAASETKQN 484
V DMKLI+AGKIL+NNRT+ E + P+C+ P + TMH+V++ PT +K EK +N
Sbjct: 53 VNDMKLINAGKILENNRTLAESRLPVCELPGMIITMHIVLRLPTLDKKSEKLQNDPPMKN 112
Query: 483 KCLCVIL 463
+C+C IL
Sbjct: 113 RCVCTIL 119
>pir||T51524 hypothetical protein T20K14_70 - Arabidopsis thaliana
gi|9755801|emb|CAC01745.1| putative protein [Arabidopsis
thaliana]
Length = 102
Score = 64.7 bits (156), Expect = 1e-09
Identities = 29/47 (61%), Positives = 39/47 (82%)
Frame = -1
Query: 657 VKDMKLISAGKILDNNRTVGECQSPLCDAPDTVTTMHVVVQPPTTEK 517
VKD+KLISAG+IL+NN+TVG+C+SP+ + VTTMHV++Q TEK
Sbjct: 53 VKDVKLISAGRILENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEK 99
>gb|AAD00119.1| NTGP5 [Nicotiana tabacum]
Length = 118
Score = 63.5 bits (153), Expect = 2e-09
Identities = 31/65 (47%), Positives = 42/65 (63%), Gaps = 2/65 (3%)
Frame = -1
Query: 651 DMKLISAGKILDNNRTVGECQSPLCDAPDTVTTMHVVVQPPTTEKEKKAASETKQNK--C 478
D+KLI+AG+IL+N+RT+GE + P+ + P V TMHVVV+PP +K E K C
Sbjct: 54 DVKLINAGRILENSRTLGESRLPVAEVPGGVITMHVVVRPPIHDKNNDKLKEDSPTKGGC 113
Query: 477 LCVIL 463
C IL
Sbjct: 114 ACTIL 118
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 563,394,656
Number of Sequences: 1393205
Number of extensions: 12189780
Number of successful extensions: 28495
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 27482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28479
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28006887348
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
