Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003823A_C02 KMC003823A_c02
(757 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD37376.1|AF145350_1 peroxidase [Glycine max] 285 5e-76
pir||JQ2252 peroxidase (EC 1.11.1.7), cationic - adzuki bean gi|... 209 3e-53
gb|AAK52084.1| peroxidase [Nicotiana tabacum] 200 2e-50
gb|AAB02926.1| peroxidase [Linum usitatissimum] 200 2e-50
pir||T09161 probable peroxidase (EC 1.11.1.7) prxr1 - spinach gi... 195 5e-49
>gb|AAD37376.1|AF145350_1 peroxidase [Glycine max]
Length = 344
Score = 285 bits (729), Expect = 5e-76
Identities = 143/167 (85%), Positives = 151/167 (89%)
Frame = -3
Query: 755 TLKAFADRNFDATDVVALSGAHTFGRAHCGTFFNRLSPLDPNMDKTLAKNLTATCPAQNS 576
TL AFA +NFD TDVVALSGAHTFGRAHCGTFFNRLSPLDPNMDKTLAK L +TCP NS
Sbjct: 178 TLDAFAAKNFDVTDVVALSGAHTFGRAHCGTFFNRLSPLDPNMDKTLAKQLQSTCPDANS 237
Query: 575 TNTANLDIRTPNVFDNKYYLDLMNRQGVFTSDQDLLSDKRTKGLVNAFAVNQTLFFEKFV 396
NTANLDIRTP VFDNKYYLDLMNRQGVFTSDQDLL+DKRTKGLVNAFA+NQTLFFEKFV
Sbjct: 238 GNTANLDIRTPTVFDNKYYLDLMNRQGVFTSDQDLLNDKRTKGLVNAFALNQTLFFEKFV 297
Query: 395 DAVIKLSQLDVLTGNQGEIRGRCNVVNSNKKSSLLASVVEDVVEFAD 255
DA IKLSQLDVLTGNQGEIRG+CNVVN+ K SLL SVVE+VV+ D
Sbjct: 298 DATIKLSQLDVLTGNQGEIRGKCNVVNARK--SLLTSVVEEVVQLVD 342
>pir||JQ2252 peroxidase (EC 1.11.1.7), cationic - adzuki bean
gi|218328|dbj|BAA01950.1| peroxidase [Vigna angularis]
Length = 357
Score = 209 bits (533), Expect = 3e-53
Identities = 104/164 (63%), Positives = 127/164 (77%), Gaps = 1/164 (0%)
Frame = -3
Query: 752 LKAFADRNFDATDVVALSGAHTFGRAHCGTFFNRLSPL-DPNMDKTLAKNLTATCPAQNS 576
L + A +N D TDVV+LSG HT G +HC +F NRL P DP MDKT KNL TCP +
Sbjct: 190 LNSLATKNLDPTDVVSLSGGHTIGISHCSSFNNRLYPTQDPVMDKTFGKNLRLTCPTNTT 249
Query: 575 TNTANLDIRTPNVFDNKYYLDLMNRQGVFTSDQDLLSDKRTKGLVNAFAVNQTLFFEKFV 396
NT LDIR+PN FDNKYY+DLMNRQG+FTSDQDL +DKRT+G+V +FAVNQ+LFFEKFV
Sbjct: 250 DNTTVLDIRSPNTFDNKYYVDLMNRQGLFTSDQDLYTDKRTRGIVTSFAVNQSLFFEKFV 309
Query: 395 DAVIKLSQLDVLTGNQGEIRGRCNVVNSNKKSSLLASVVEDVVE 264
A++K+ QL VLTGNQGEIR C+V N+N K + L+SVVE+V +
Sbjct: 310 FAMLKMGQLSVLTGNQGEIRANCSVRNANSK-AFLSSVVENVAQ 352
>gb|AAK52084.1| peroxidase [Nicotiana tabacum]
Length = 354
Score = 200 bits (509), Expect = 2e-50
Identities = 98/161 (60%), Positives = 124/161 (76%), Gaps = 1/161 (0%)
Frame = -3
Query: 752 LKAFADRNFDATDVVALSGAHTFGRAHCGTFFNRLSP-LDPNMDKTLAKNLTATCPAQNS 576
L + A +NF TDVVALSG HT G HC +F RL P DP+MDKT A NL TCP NS
Sbjct: 185 LTSLATKNFTPTDVVALSGGHTIGIGHCTSFTERLYPNQDPSMDKTFANNLKNTCPTSNS 244
Query: 575 TNTANLDIRTPNVFDNKYYLDLMNRQGVFTSDQDLLSDKRTKGLVNAFAVNQTLFFEKFV 396
TNT LDIR+PN FDNKYY+DLMNRQG+FTSDQDL +D+RT+G+V +FA+N++LFFE+FV
Sbjct: 245 TNTTVLDIRSPNKFDNKYYVDLMNRQGLFTSDQDLYTDRRTRGIVTSFAINESLFFEEFV 304
Query: 395 DAVIKLSQLDVLTGNQGEIRGRCNVVNSNKKSSLLASVVED 273
+++IK+ QL+VLTG QGEIR C+V NS + LL++ V +
Sbjct: 305 NSMIKMGQLNVLTGTQGEIRANCSVRNSANYNLLLSTSVAE 345
>gb|AAB02926.1| peroxidase [Linum usitatissimum]
Length = 355
Score = 200 bits (508), Expect = 2e-50
Identities = 103/166 (62%), Positives = 126/166 (75%), Gaps = 3/166 (1%)
Frame = -3
Query: 752 LKAFADRNFDATDVVALSGAHTFGRAHCGTFFNRLSP-LDPNMDKTLAKNLTATCPAQNS 576
L + A +N + TD VALSGAHT G +HC +F +RL P DP+MD+T AKNL ATCP Q +
Sbjct: 185 LSSLATKNLNPTDAVALSGAHTIGISHCSSFTDRLYPNQDPSMDQTFAKNLKATCP-QAA 243
Query: 575 TNTANLDIRTPNVFDNKYYLDLMNRQGVFTSDQDLLSDKRTKGLVNAFAVNQTLFFEKFV 396
T +DIR+PNVFDNKYY+DLMNRQG+FTSDQDL +D RT+G+V +FA+NQTLFFEKFV
Sbjct: 244 TTDNIVDIRSPNVFDNKYYVDLMNRQGLFTSDQDLYTDSRTRGIVTSFAINQTLFFEKFV 303
Query: 395 DAVIKLSQLDVLTGNQGEIRGRCNVVNSNK--KSSLLASVVEDVVE 264
A+IK+ Q+ VLTG QGEIR C+V NS K SS L VE+ VE
Sbjct: 304 VAMIKMGQISVLTGKQGEIRANCSVTNSAKVQTSSFLEEAVEEAVE 349
>pir||T09161 probable peroxidase (EC 1.11.1.7) prxr1 - spinach
gi|1781322|emb|CAA71488.1| peroxidase [Spinacia
oleracea]
Length = 353
Score = 195 bits (496), Expect = 5e-49
Identities = 93/147 (63%), Positives = 114/147 (77%), Gaps = 1/147 (0%)
Frame = -3
Query: 752 LKAFADRNFDATDVVALSGAHTFGRAHCGTFFNRLSPL-DPNMDKTLAKNLTATCPAQNS 576
L AFA +N +ATD+VALSG HT G +HC +F NRL P DP+MD+TLA NL TCP +
Sbjct: 184 LNAFATKNLNATDLVALSGGHTIGISHCTSFTNRLYPTQDPSMDQTLANNLKLTCPTATT 243
Query: 575 TNTANLDIRTPNVFDNKYYLDLMNRQGVFTSDQDLLSDKRTKGLVNAFAVNQTLFFEKFV 396
+T NLD+RTPNVFDNKY++DLMN QG+FTSDQ L +D RTK +V +FA NQ LFFEKF+
Sbjct: 244 NSTTNLDLRTPNVFDNKYFVDLMNHQGLFTSDQTLYTDSRTKAIVTSFATNQNLFFEKFI 303
Query: 395 DAVIKLSQLDVLTGNQGEIRGRCNVVN 315
DA++K+SQL VLTG QGEIR C+ N
Sbjct: 304 DAMVKMSQLSVLTGTQGEIRTNCSARN 330
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 633,080,968
Number of Sequences: 1393205
Number of extensions: 14068364
Number of successful extensions: 51481
Number of sequences better than 10.0: 598
Number of HSP's better than 10.0 without gapping: 45834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49664
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 36877108757
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
