Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003819A_C01 KMC003819A_c01
(495 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F86411 pnrotein F1K23.16 [imported] - Arabidopsis thaliana ... 183 1e-45
gb|AAF24548.2|AC007508_11 F1K23.17 [Arabidopsis thaliana] 179 2e-44
ref|NP_174182.1| lipase, putative; protein id: At1g28600.1, supp... 179 2e-44
gb|AAM65183.1| lipase, putative [Arabidopsis thaliana] 178 3e-44
gb|AAL86351.1| putative lipase [Arabidopsis thaliana] 177 6e-44
>pir||F86411 pnrotein F1K23.16 [imported] - Arabidopsis thaliana
gi|10764857|gb|AAG22835.1|AC007508_11 F1K23.16
[Arabidopsis thaliana]
Length = 383
Score = 183 bits (464), Expect = 1e-45
Identities = 78/132 (59%), Positives = 100/132 (75%), Gaps = 2/132 (1%)
Frame = -2
Query: 485 GCVKWLNEFAEFYNQKLQLEIHRLRELHPHANIIYADYYNAALPLYQNPQKFGF--RGLE 312
GC+ WLN+F+E+YN+KLQ E++RL +L+PH NIIY DY+NA L LYQ P KFGF R L
Sbjct: 246 GCLTWLNDFSEYYNEKLQAELNRLSKLYPHVNIIYGDYFNALLRLYQEPSKFGFMDRPLP 305
Query: 311 ICCGMGGPYNYNASAGCGSPGVIACDDPSEYIGWDGIHLTEAAYGFISDGLMNGPYSFPQ 132
CCG+GGPYN+ S CGS GV C DPS+Y+ WDG+H+TEAAY +I+DGL+ GPY+ P
Sbjct: 306 ACCGLGGPYNFTLSKKCGSVGVKYCSDPSKYVNWDGVHMTEAAYKWIADGLLKGPYTIPS 365
Query: 131 FSTLCLNNNVNS 96
F LCL + + S
Sbjct: 366 FHWLCLGSKIKS 377
>gb|AAF24548.2|AC007508_11 F1K23.17 [Arabidopsis thaliana]
Length = 823
Score = 179 bits (453), Expect = 2e-44
Identities = 73/130 (56%), Positives = 104/130 (79%), Gaps = 2/130 (1%)
Frame = -2
Query: 485 GCVKWLNEFAEFYNQKLQLEIHRLRELHPHANIIYADYYNAALPLYQNPQKFGF--RGLE 312
GC+KWLN+F E++++KL++E++RLR+L+PH NIIYADYYN+ L +++ P KFGF R
Sbjct: 246 GCLKWLNKFGEYHSEKLKVELNRLRKLYPHVNIIYADYYNSLLRIFKEPAKFGFMERPFP 305
Query: 311 ICCGMGGPYNYNASAGCGSPGVIACDDPSEYIGWDGIHLTEAAYGFISDGLMNGPYSFPQ 132
CCG+GGPYN+N + CGS GV +C DPS+Y+GWDG+H+TEAAY +I+DG++NGPY+ P
Sbjct: 306 ACCGIGGPYNFNFTRKCGSVGVKSCKDPSKYVGWDGVHMTEAAYKWIADGILNGPYANPP 365
Query: 131 FSTLCLNNNV 102
F CL + +
Sbjct: 366 FDRSCLRSEI 375
Score = 177 bits (449), Expect = 6e-44
Identities = 78/130 (60%), Positives = 101/130 (77%), Gaps = 2/130 (1%)
Frame = -2
Query: 485 GCVKWLNEFAEFYNQKLQLEIHRLRELHPHANIIYADYYNAALPLYQNPQKFGF--RGLE 312
GC+KWLN+F+E+YN++LQ E++ LR+L+PH NIIYADYYNA L L+Q P KFGF R L
Sbjct: 672 GCLKWLNDFSEYYNKQLQEELNGLRKLYPHVNIIYADYYNALLRLFQEPAKFGFMNRPLP 731
Query: 311 ICCGMGGPYNYNASAGCGSPGVIACDDPSEYIGWDGIHLTEAAYGFISDGLMNGPYSFPQ 132
CCG+GG YN+N S CGS GV CDDPS+Y+ +DGIH+TEAAY IS+GL+ GPY+ P
Sbjct: 732 ACCGVGGSYNFNFSRRCGSVGVEYCDDPSQYVNYDGIHMTEAAYRLISEGLLKGPYAIPP 791
Query: 131 FSTLCLNNNV 102
F CL++ +
Sbjct: 792 FKWSCLSSEI 801
>ref|NP_174182.1| lipase, putative; protein id: At1g28600.1, supported by cDNA:
37307., supported by cDNA: gi_14326569 [Arabidopsis
thaliana] gi|14326570|gb|AAK60329.1|AF385739_1
At1g28600/F1K23_6 [Arabidopsis thaliana]
gi|22137320|gb|AAM91505.1| At1g28600/F1K23_6
[Arabidopsis thaliana]
Length = 393
Score = 179 bits (453), Expect = 2e-44
Identities = 73/130 (56%), Positives = 104/130 (79%), Gaps = 2/130 (1%)
Frame = -2
Query: 485 GCVKWLNEFAEFYNQKLQLEIHRLRELHPHANIIYADYYNAALPLYQNPQKFGF--RGLE 312
GC+KWLN+F E++++KL++E++RLR+L+PH NIIYADYYN+ L +++ P KFGF R
Sbjct: 246 GCLKWLNKFGEYHSEKLKVELNRLRKLYPHVNIIYADYYNSLLRIFKEPAKFGFMERPFP 305
Query: 311 ICCGMGGPYNYNASAGCGSPGVIACDDPSEYIGWDGIHLTEAAYGFISDGLMNGPYSFPQ 132
CCG+GGPYN+N + CGS GV +C DPS+Y+GWDG+H+TEAAY +I+DG++NGPY+ P
Sbjct: 306 ACCGIGGPYNFNFTRKCGSVGVKSCKDPSKYVGWDGVHMTEAAYKWIADGILNGPYANPP 365
Query: 131 FSTLCLNNNV 102
F CL + +
Sbjct: 366 FDRSCLRSEI 375
>gb|AAM65183.1| lipase, putative [Arabidopsis thaliana]
Length = 393
Score = 178 bits (451), Expect = 3e-44
Identities = 73/130 (56%), Positives = 103/130 (79%), Gaps = 2/130 (1%)
Frame = -2
Query: 485 GCVKWLNEFAEFYNQKLQLEIHRLRELHPHANIIYADYYNAALPLYQNPQKFGF--RGLE 312
GC+KWLN+F E++++KL+ E++RLR+L+PH NIIYADYYN+ L +++ P KFGF R
Sbjct: 246 GCLKWLNKFGEYHSEKLKAELNRLRKLYPHVNIIYADYYNSLLRIFKEPAKFGFMDRPFP 305
Query: 311 ICCGMGGPYNYNASAGCGSPGVIACDDPSEYIGWDGIHLTEAAYGFISDGLMNGPYSFPQ 132
CCG+GGPYN+N + CGS GV +C DPS+Y+GWDG+H+TEAAY +I+DG++NGPY+ P
Sbjct: 306 ACCGIGGPYNFNFTRKCGSVGVKSCKDPSKYVGWDGVHMTEAAYKWIADGILNGPYANPP 365
Query: 131 FSTLCLNNNV 102
F CL + +
Sbjct: 366 FDRSCLRSEI 375
>gb|AAL86351.1| putative lipase [Arabidopsis thaliana]
Length = 243
Score = 177 bits (449), Expect = 6e-44
Identities = 78/130 (60%), Positives = 101/130 (77%), Gaps = 2/130 (1%)
Frame = -2
Query: 485 GCVKWLNEFAEFYNQKLQLEIHRLRELHPHANIIYADYYNAALPLYQNPQKFGF--RGLE 312
GC+KWLN+F+E+YN++LQ E++ LR+L+PH NIIYADYYNA L L+Q P KFGF R L
Sbjct: 92 GCLKWLNDFSEYYNKQLQEELNGLRKLYPHVNIIYADYYNALLRLFQEPAKFGFMNRPLP 151
Query: 311 ICCGMGGPYNYNASAGCGSPGVIACDDPSEYIGWDGIHLTEAAYGFISDGLMNGPYSFPQ 132
CCG+GG YN+N S CGS GV CDDPS+Y+ +DGIH+TEAAY IS+GL+ GPY+ P
Sbjct: 152 ACCGVGGSYNFNFSRRCGSVGVEYCDDPSQYVNYDGIHMTEAAYRLISEGLLKGPYAIPP 211
Query: 131 FSTLCLNNNV 102
F CL++ +
Sbjct: 212 FKWSCLSSEI 221
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 448,581,105
Number of Sequences: 1393205
Number of extensions: 10183287
Number of successful extensions: 24860
Number of sequences better than 10.0: 251
Number of HSP's better than 10.0 without gapping: 23788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24637
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14493193850
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
