Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003817A_C01 KMC003817A_c01
(463 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK97728.1| C7A10_610/C7A10_610 [Arabidopsis thaliana] gi|235... 126 1e-28
ref|NP_195393.1| quinone reductase family; protein id: At4g36750... 126 1e-28
gb|AAM64959.1| minor allergen [Arabidopsis thaliana] 126 1e-28
gb|AAL58971.1|AC091811_20 putative reductase [Oryza sativa] 110 5e-24
ref|NP_200261.1| quinone reductase, putative; protein id: At5g54... 105 2e-22
>gb|AAK97728.1| C7A10_610/C7A10_610 [Arabidopsis thaliana]
gi|23505773|gb|AAN28746.1| At4g36690/C7A10_610
[Arabidopsis thaliana]
Length = 152
Score = 126 bits (316), Expect = 1e-28
Identities = 61/79 (77%), Positives = 66/79 (83%), Gaps = 6/79 (7%)
Frame = -3
Query: 458 GQQSLSWH------HHGMLFVPIGYTFGPGMFKMDSIRGGSPYGAGVYAGDGTREPTETE 297
GQ++ +W HHGMLFVPIGYTFG GMFKMDSIRGGSPYGAGV+AGDG+RE TETE
Sbjct: 72 GQETTAWTAITQLVHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAGDGSREATETE 131
Query: 296 LTLAEHQGKYMATIVKRLA 240
L LAEHQG YMA IVKRLA
Sbjct: 132 LALAEHQGNYMAAIVKRLA 150
>ref|NP_195393.1| quinone reductase family; protein id: At4g36750.1, supported by
cDNA: 35084., supported by cDNA: gi_15529267
[Arabidopsis thaliana] gi|25305495|pir||A85434 minor
allergen [imported] - Arabidopsis thaliana
gi|2464905|emb|CAB16805.1| minor allergen [Arabidopsis
thaliana] gi|7270624|emb|CAB80341.1| minor allergen
[Arabidopsis thaliana]
Length = 273
Score = 126 bits (316), Expect = 1e-28
Identities = 61/79 (77%), Positives = 66/79 (83%), Gaps = 6/79 (7%)
Frame = -3
Query: 458 GQQSLSWH------HHGMLFVPIGYTFGPGMFKMDSIRGGSPYGAGVYAGDGTREPTETE 297
GQ++ +W HHGMLFVPIGYTFG GMFKMDSIRGGSPYGAGV+AGDG+RE TETE
Sbjct: 193 GQETTAWTAITQLVHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAGDGSREATETE 252
Query: 296 LTLAEHQGKYMATIVKRLA 240
L LAEHQG YMA IVKRLA
Sbjct: 253 LALAEHQGNYMAAIVKRLA 271
>gb|AAM64959.1| minor allergen [Arabidopsis thaliana]
Length = 273
Score = 126 bits (316), Expect = 1e-28
Identities = 61/79 (77%), Positives = 66/79 (83%), Gaps = 6/79 (7%)
Frame = -3
Query: 458 GQQSLSWH------HHGMLFVPIGYTFGPGMFKMDSIRGGSPYGAGVYAGDGTREPTETE 297
GQ++ +W HHGMLFVPIGYTFG GMFKMDSIRGGSPYGAGV+AGDG+RE TETE
Sbjct: 193 GQETTAWTAITQLVHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAGDGSREATETE 252
Query: 296 LTLAEHQGKYMATIVKRLA 240
L LAEHQG YMA IVKRLA
Sbjct: 253 LALAEHQGNYMAAIVKRLA 271
>gb|AAL58971.1|AC091811_20 putative reductase [Oryza sativa]
Length = 252
Score = 110 bits (276), Expect = 5e-24
Identities = 50/78 (64%), Positives = 62/78 (79%), Gaps = 6/78 (7%)
Frame = -3
Query: 458 GQQSLSWH------HHGMLFVPIGYTFGPGMFKMDSIRGGSPYGAGVYAGDGTREPTETE 297
GQ++ +W HHGMLFVPIGYTFG GM +M +RGGSPYGAGV++GDG+R P+E E
Sbjct: 170 GQETTAWTAITQLAHHGMLFVPIGYTFGEGMLEMGELRGGSPYGAGVFSGDGSRPPSELE 229
Query: 296 LTLAEHQGKYMATIVKRL 243
L LAEH GKYMAT+VK++
Sbjct: 230 LALAEHHGKYMATLVKKM 247
>ref|NP_200261.1| quinone reductase, putative; protein id: At5g54500.1 [Arabidopsis
thaliana] gi|8885593|dbj|BAA97523.1| 1,4-benzoquinone
reductase-like; Trp repressor binding protein-like
[Arabidopsis thaliana] gi|21539481|gb|AAM53293.1|
1,4-benzoquinone reductase-like protein [Arabidopsis
thaliana] gi|25084252|gb|AAN72205.1| 1,4-benzoquinone
reductase-like protein [Arabidopsis thaliana]
Length = 204
Score = 105 bits (262), Expect = 2e-22
Identities = 45/64 (70%), Positives = 57/64 (88%)
Frame = -3
Query: 434 HHGMLFVPIGYTFGPGMFKMDSIRGGSPYGAGVYAGDGTREPTETELTLAEHQGKYMATI 255
HHGMLFVPIGYTFG GMF+M++++GGSPYGAG +AGDG+R+PTE EL A HQG+Y+A+I
Sbjct: 136 HHGMLFVPIGYTFGAGMFEMENVKGGSPYGAGTFAGDGSRQPTELELQQAFHQGQYIASI 195
Query: 254 VKRL 243
K+L
Sbjct: 196 TKKL 199
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 440,119,992
Number of Sequences: 1393205
Number of extensions: 10039959
Number of successful extensions: 37031
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 34720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36844
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11998661767
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
