Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003797A_C01 KMC003797A_c01
(614 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193037.1| putative protein; protein id: At4g13010.1, supp... 215 4e-55
emb|CAD54431.1| quinone-oxidoreductase homologue [Spinacia olera... 205 4e-52
gb|AAG53944.1| quinone-oxidoreductase QR1 [Triphysaria versicolor] 199 2e-50
dbj|BAA83082.1| LEDI-4 protein [Lithospermum erythrorhizon] 120 1e-26
ref|NP_657418.1| adh_zinc, Zinc-binding dehydrogenases [Bacillus... 58 9e-08
>ref|NP_193037.1| putative protein; protein id: At4g13010.1, supported by cDNA:
6276., supported by cDNA: gi_15028000, supported by
cDNA: gi_15724255, supported by cDNA: gi_15912236
[Arabidopsis thaliana] gi|7430959|pir||T10203
hypothetical protein F25G13.100 - Arabidopsis thaliana
gi|5123942|emb|CAB45500.1| putative protein [Arabidopsis
thaliana] gi|7268003|emb|CAB78343.1| putative protein
[Arabidopsis thaliana] gi|15028001|gb|AAK76531.1|
unknown protein [Arabidopsis thaliana]
gi|15724256|gb|AAL06521.1|AF412068_1
AT4g13010/F25G13_100 [Arabidopsis thaliana]
gi|15912237|gb|AAL08252.1| AT4g13010/F25G13_100
[Arabidopsis thaliana] gi|21436057|gb|AAM51229.1|
unknown protein [Arabidopsis thaliana]
Length = 329
Score = 215 bits (547), Expect = 4e-55
Identities = 101/142 (71%), Positives = 121/142 (85%)
Frame = -3
Query: 612 GARNIDFVKGLGADEVLDYKTPEGAALRSPSGRKYDAVIHCTTGIPWSTFDPILTERGVV 433
GARNI+FVK LGADEVLDYKTPEGAAL+SPSG+KYDAV+HC GIP+S F+P L+E G V
Sbjct: 188 GARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIPFSVFEPNLSENGKV 247
Query: 432 VDLTPNGSSFMTFALKKLTFSKKQLVPFFVTVKREGLEYLTQLVKDGKLKTIIDSKFPLS 253
+D+TP ++ T+A+KK+T SKKQLVP + K E LE++ LVK+GK+KT+IDSK PLS
Sbjct: 248 IDITPGPNAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEGKVKTVIDSKHPLS 307
Query: 252 KAEDAWAKSIDGHATGKIIVEP 187
KAEDAWAKSIDGHATGKIIVEP
Sbjct: 308 KAEDAWAKSIDGHATGKIIVEP 329
>emb|CAD54431.1| quinone-oxidoreductase homologue [Spinacia oleracea]
Length = 329
Score = 205 bits (521), Expect = 4e-52
Identities = 98/142 (69%), Positives = 116/142 (81%)
Frame = -3
Query: 612 GARNIDFVKGLGADEVLDYKTPEGAALRSPSGRKYDAVIHCTTGIPWSTFDPILTERGVV 433
GARN+DFVKGLGADEVLDYKTPEGA+L SPSG+KYD V+H +GIPWSTF+P L+E G V
Sbjct: 188 GARNLDFVKGLGADEVLDYKTPEGASLTSPSGKKYDYVVHGASGIPWSTFEPNLSEAGKV 247
Query: 432 VDLTPNGSSFMTFALKKLTFSKKQLVPFFVTVKREGLEYLTQLVKDGKLKTIIDSKFPLS 253
+DLTP ++ MTFA KKLTFSKKQLVP + K EY+ LVK+ KLKT+IDSK PLS
Sbjct: 248 IDLTPGPTAMMTFAWKKLTFSKKQLVPLLLIPKIPNFEYVVNLVKEKKLKTVIDSKHPLS 307
Query: 252 KAEDAWAKSIDGHATGKIIVEP 187
K EDAW++ + GHATGKII+EP
Sbjct: 308 KGEDAWSRIMGGHATGKIIIEP 329
>gb|AAG53944.1| quinone-oxidoreductase QR1 [Triphysaria versicolor]
Length = 329
Score = 199 bits (507), Expect = 2e-50
Identities = 94/142 (66%), Positives = 115/142 (80%)
Frame = -3
Query: 612 GARNIDFVKGLGADEVLDYKTPEGAALRSPSGRKYDAVIHCTTGIPWSTFDPILTERGVV 433
G+RN D VK LGADEV+DYKTPEGAAL+SPSG+KYDAVIHC + +PWS F P L++ G V
Sbjct: 188 GSRNFDLVKSLGADEVIDYKTPEGAALKSPSGKKYDAVIHCASPLPWSVFKPNLSKHGKV 247
Query: 432 VDLTPNGSSFMTFALKKLTFSKKQLVPFFVTVKREGLEYLTQLVKDGKLKTIIDSKFPLS 253
+D+TP +T A+ KLT SKK+LV V +K E L YL +L+++GKLKT+IDSKF LS
Sbjct: 248 IDITPGPRVMLTSAMTKLTCSKKRLVTLLVVIKGEHLSYLVELMREGKLKTVIDSKFSLS 307
Query: 252 KAEDAWAKSIDGHATGKIIVEP 187
KAE+AWAKSIDGHATGKI+VEP
Sbjct: 308 KAEEAWAKSIDGHATGKIVVEP 329
>dbj|BAA83082.1| LEDI-4 protein [Lithospermum erythrorhizon]
Length = 288
Score = 120 bits (302), Expect = 1e-26
Identities = 54/89 (60%), Positives = 70/89 (77%)
Frame = -3
Query: 612 GARNIDFVKGLGADEVLDYKTPEGAALRSPSGRKYDAVIHCTTGIPWSTFDPILTERGVV 433
GARNID VK LGADEVLDYK+P+G AL+SPSG+KYDA++HC IP+S F+P L+ +G V
Sbjct: 188 GARNIDLVKSLGADEVLDYKSPDGVALKSPSGKKYDAILHCGPAIPFSVFEPNLSAKGKV 247
Query: 432 VDLTPNGSSFMTFALKKLTFSKKQLVPFF 346
+D+TP+ + TF LKK+T+S K L P F
Sbjct: 248 IDITPSPKAIFTFVLKKITWSSKTLEPLF 276
>ref|NP_657418.1| adh_zinc, Zinc-binding dehydrogenases [Bacillus anthracis A2012]
Length = 332
Score = 58.2 bits (139), Expect = 9e-08
Identities = 49/154 (31%), Positives = 71/154 (45%), Gaps = 18/154 (11%)
Frame = -3
Query: 597 DFVKGLGADEVLDYKTPEGAALRSPSGRKYDAVIHCTTGIPWSTFDPILTERGVVVDLT- 421
D VK LGAD++++YKT + + + YDAV G I+ G +V ++
Sbjct: 181 DLVKSLGADQIINYKTEKFEEIL----KDYDAVFDTIGGTTLEKSFDIIKSGGNIVSVSG 236
Query: 420 -PN-------GSSFM-----TFALKKLTFSKK----QLVPFFVTVKREGLEYLTQLVKDG 292
PN GS F + A KKLT +K Q F+ + L + ++ G
Sbjct: 237 IPNARFSKEFGSGFFKTFLFSLASKKLTALEKKHNAQYSFLFMKPSGDQLRTIANYIEAG 296
Query: 291 KLKTIIDSKFPLSKAEDAWAKSIDGHATGKIIVE 190
K+K +ID FP A+ A S G A GKIIV+
Sbjct: 297 KIKPVIDRVFPFEDAQKAMEYSEAGRAKGKIIVK 330
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 508,169,445
Number of Sequences: 1393205
Number of extensions: 10974701
Number of successful extensions: 30264
Number of sequences better than 10.0: 155
Number of HSP's better than 10.0 without gapping: 29317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30199
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24854530794
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
