Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003791A_C01 KMC003791A_c01
(587 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_201490.1| disease resistance protein (NBS-LRR class), put... 87 2e-16
ref|NP_195056.1| disease resistance protein (CC-NBS-LRR class), ... 86 3e-16
ref|NP_174620.1| disease resistance protein (CC-NBS-LRR class), ... 84 1e-15
ref|NP_201491.1| disease resistance protein (CC-NBS-LRR class), ... 83 2e-15
ref|NP_196092.1| disease resistance protein (CC-NBS-LRR class), ... 83 3e-15
>ref|NP_201490.1| disease resistance protein (NBS-LRR class), putative; protein id:
At5g66890.1 [Arabidopsis thaliana]
gi|9758139|dbj|BAB08631.1| contains similarity to
disease resistance protein~gene_id:MUD21.15 [Arabidopsis
thaliana]
Length = 415
Score = 87.0 bits (214), Expect = 2e-16
Identities = 46/98 (46%), Positives = 69/98 (69%)
Frame = -3
Query: 585 LELPKSITNLEKLQFLDISDCISLSNLPEDMGELKKLEKLNVRGCSRLTELPTSIMDLEN 406
LELP++I L+ L+FLD+S L NLP ++G+LKKLEK++++ C R ELP S+ +LEN
Sbjct: 317 LELPETIDRLDNLRFLDVSGGFQLKNLPLEIGKLKKLEKISMKDCYR-CELPDSVKNLEN 375
Query: 405 LEEVECDEEIAELWEPVKQILSDLQLHVAPTDFNLDFL 292
L EV+CDE+ A LW+ +K + +L + T+ NL+ L
Sbjct: 376 L-EVKCDEDTAFLWKILKPEMKNLTITEEKTEHNLNLL 412
Score = 37.0 bits (84), Expect = 0.18
Identities = 25/82 (30%), Positives = 42/82 (50%), Gaps = 3/82 (3%)
Frame = -3
Query: 582 ELPKSITNLEKLQFLDISDCISLSNLPEDMGELKKLEKLNVRGCSRLTELPTSI---MDL 412
EL L+ LQ ++I C +L LP + ++ L+KL+V C++L + +I DL
Sbjct: 246 ELEDVSETLQSLQEIEIDYCYNLDELPYWISQVVSLKKLSVTNCNKLCRVIEAIGDLRDL 305
Query: 411 ENLEEVECDEEIAELWEPVKQI 346
E L C + EL E + ++
Sbjct: 306 ETLRLSSC-ASLLELPETIDRL 326
>ref|NP_195056.1| disease resistance protein (CC-NBS-LRR class), putative; protein id:
At4g33300.1 [Arabidopsis thaliana] gi|7485661|pir||T05981
hypothetical protein F17M5.60 - Arabidopsis thaliana
gi|4490297|emb|CAB38788.1| putative protein [Arabidopsis
thaliana] gi|7270278|emb|CAB80047.1| putative protein
[Arabidopsis thaliana]
Length = 855
Score = 85.9 bits (211), Expect = 3e-16
Identities = 42/98 (42%), Positives = 68/98 (68%)
Frame = -3
Query: 579 LPKSITNLEKLQFLDISDCISLSNLPEDMGELKKLEKLNVRGCSRLTELPTSIMDLENLE 400
LP I L L++LDIS C+SLS LPE++G+LKKLEK+++R C ++ P+S + L++L
Sbjct: 759 LPGEICELPGLKYLDISQCVSLSCLPEEIGKLKKLEKIDMRECC-FSDRPSSAVSLKSLR 817
Query: 399 EVECDEEIAELWEPVKQILSDLQLHVAPTDFNLDFLSK 286
V CD ++A +WE V++ + L++ A F+LD+L +
Sbjct: 818 HVICDTDVAFMWEEVEKAVPGLKIEAAEKCFSLDWLDE 855
Score = 34.7 bits (78), Expect = 0.92
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = -3
Query: 552 KLQFLDISDCISLSNLPEDMGELKKLEKLNVRGCSRLTELPTSIMDLENLE 400
KL L I C L LP + L L L++ C RL ELP ++ L+ LE
Sbjct: 696 KLGDLTIDHCDDLVALPSSICGLTSLSCLSITNCPRLGELPKNLSKLQALE 746
>ref|NP_174620.1| disease resistance protein (CC-NBS-LRR class), putative; protein
id: At1g33560.1 [Arabidopsis thaliana]
gi|25403197|pir||D86459 probable disease resistance
protein [imported] - Arabidopsis thaliana
gi|10998939|gb|AAG26078.1|AC069299_4 disease resistance
protein, putative [Arabidopsis thaliana]
gi|12322379|gb|AAG51211.1|AC051630_8 disease resistance
protein, putative; 92850-95636 [Arabidopsis thaliana]
Length = 797
Score = 84.0 bits (206), Expect = 1e-15
Identities = 42/98 (42%), Positives = 65/98 (65%)
Frame = -3
Query: 585 LELPKSITNLEKLQFLDISDCISLSNLPEDMGELKKLEKLNVRGCSRLTELPTSIMDLEN 406
+ LP + L L+++DIS C+SL +LPE G+L LEK+++R CS L LP+S+ L +
Sbjct: 699 ISLPVEVCELPCLKYVDISQCVSLVSLPEKFGKLGSLEKIDMRECS-LLGLPSSVAALVS 757
Query: 405 LEEVECDEEIAELWEPVKQILSDLQLHVAPTDFNLDFL 292
L V CDEE + +WE VK+++ +L + VA F +D+L
Sbjct: 758 LRHVICDEETSSMWEMVKKVVPELCIEVAKKCFTVDWL 795
>ref|NP_201491.1| disease resistance protein (CC-NBS-LRR class), putative; protein
id: At5g66900.1 [Arabidopsis thaliana]
gi|9758140|dbj|BAB08632.1| disease resistance
protein-like [Arabidopsis thaliana]
Length = 809
Score = 83.2 bits (204), Expect = 2e-15
Identities = 43/97 (44%), Positives = 66/97 (67%)
Frame = -3
Query: 582 ELPKSITNLEKLQFLDISDCISLSNLPEDMGELKKLEKLNVRGCSRLTELPTSIMDLENL 403
ELP++ L L+FLDIS C+ L LP+++G+L+ L+K+++R CS ELP S+ +LENL
Sbjct: 712 ELPEATEGLSNLRFLDISHCLGLRKLPQEIGKLQNLKKISMRKCSG-CELPESVTNLENL 770
Query: 402 EEVECDEEIAELWEPVKQILSDLQLHVAPTDFNLDFL 292
EV+CDEE LWE +K + +L++ + NL+ L
Sbjct: 771 -EVKCDEETGLLWERLKPKMRNLRVQEEEIEHNLNLL 806
Score = 44.3 bits (103), Expect = 0.001
Identities = 21/53 (39%), Positives = 33/53 (61%)
Frame = -3
Query: 558 LEKLQFLDISDCISLSNLPEDMGELKKLEKLNVRGCSRLTELPTSIMDLENLE 400
L KLQ +DI C L LP + E+ L+ L++ C++L++LP +I +L LE
Sbjct: 648 LSKLQEIDIDYCYDLDELPYWISEIVSLKTLSITNCNKLSQLPEAIGNLSRLE 700
>ref|NP_196092.1| disease resistance protein (CC-NBS-LRR class), putative; protein
id: At5g04720.1, supported by cDNA: gi_15292720,
supported by cDNA: gi_21281176 [Arabidopsis thaliana]
gi|11357259|pir||T48468 disease resistance-like protein
- Arabidopsis thaliana gi|7413534|emb|CAB86014.1|
disease resistance-like protein [Arabidopsis thaliana]
gi|9758447|dbj|BAB08976.1| contains similarity to
disease resistance protein~gene_id:MUK11.4 [Arabidopsis
thaliana] gi|15292721|gb|AAK92729.1| putative disease
resistance [Arabidopsis thaliana]
gi|21281177|gb|AAM45000.1| putative disease resistance
[Arabidopsis thaliana]
Length = 811
Score = 82.8 bits (203), Expect = 3e-15
Identities = 40/96 (41%), Positives = 65/96 (67%)
Frame = -3
Query: 579 LPKSITNLEKLQFLDISDCISLSNLPEDMGELKKLEKLNVRGCSRLTELPTSIMDLENLE 400
LP I L +L+++DIS C+SLS+LPE +G++K LEK++ R CS L+ +P S++ L +L
Sbjct: 715 LPVEICELPRLKYVDISQCVSLSSLPEKIGKVKTLEKIDTRECS-LSSIPNSVVLLTSLR 773
Query: 399 EVECDEEIAELWEPVKQILSDLQLHVAPTDFNLDFL 292
V CD E +WE V++ ++ L++ A F+ D+L
Sbjct: 774 HVICDREALWMWEKVQKAVAGLRVEAAEKSFSRDWL 809
Score = 33.5 bits (75), Expect = 2.0
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -3
Query: 552 KLQFLDISDCISLSNLPEDMGELKKLEKLNVRGCSRLTELPTSIMDLENLE 400
KL L I C L LP + + L +++ C R+ ELP ++ L+ L+
Sbjct: 652 KLSDLTIDHCDDLLELPSTICGITSLNSISITNCPRIKELPKNLSKLKALQ 702
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 433,628,566
Number of Sequences: 1393205
Number of extensions: 8387482
Number of successful extensions: 31331
Number of sequences better than 10.0: 948
Number of HSP's better than 10.0 without gapping: 26325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30804
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
