Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003760A_C01 KMC003760A_c01
(591 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG33636.1|AF315289_1 beta-carotene hydroxylase [Citrus unshiu] 304 5e-82
gb|AAG10793.1|AF296158_1 beta-carotene hydroxylase [Citrus unshiu] 304 5e-82
gb|AAM77007.1|AF499108_1 beta-carotene hydroxylase [Vitis vinifera] 300 1e-80
emb|CAA70888.1| beta-carotene hydroxylase 2 [Capsicum annuum] 296 1e-79
emb|CAB55626.1| beta-carotene hydroxylase [Lycopersicon esculentum] 296 1e-79
>gb|AAG33636.1|AF315289_1 beta-carotene hydroxylase [Citrus unshiu]
Length = 311
Score = 304 bits (779), Expect = 5e-82
Identities = 144/160 (90%), Positives = 151/160 (94%)
Frame = -3
Query: 589 VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFHKG 410
VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLS+GFFHKG
Sbjct: 155 VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKG 214
Query: 409 LVPGLCFGAGLGITVFGIAYMFVHDGLVHKRFPVGPIANVPYFRRVASAHQLHHSDKFNG 230
LVPGLCFGAGLGITVFG+AYMFVHDGLVHKRFPVGPIA+VPYFRRVA+AHQLHHSDKF+G
Sbjct: 215 LVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHG 274
Query: 229 VPYGLFLGPMVWIFIVVQELEEVGGLEELEKEISRRKKSY 110
VPYGLFLGP +ELEEVGGLEELEKEIS+R KSY
Sbjct: 275 VPYGLFLGP--------KELEEVGGLEELEKEISKRIKSY 306
>gb|AAG10793.1|AF296158_1 beta-carotene hydroxylase [Citrus unshiu]
Length = 311
Score = 304 bits (779), Expect = 5e-82
Identities = 144/160 (90%), Positives = 151/160 (94%)
Frame = -3
Query: 589 VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFHKG 410
VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLS+GFFHKG
Sbjct: 155 VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKG 214
Query: 409 LVPGLCFGAGLGITVFGIAYMFVHDGLVHKRFPVGPIANVPYFRRVASAHQLHHSDKFNG 230
LVPGLCFGAGLGITVFG+AYMFVHDGLVHKRFPVGPIA+VPYFRRVA+AHQLHHSDKF+G
Sbjct: 215 LVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHSDKFHG 274
Query: 229 VPYGLFLGPMVWIFIVVQELEEVGGLEELEKEISRRKKSY 110
VPYGLFLGP +ELEEVGGLEELEKEIS+R KSY
Sbjct: 275 VPYGLFLGP--------KELEEVGGLEELEKEISKRIKSY 306
>gb|AAM77007.1|AF499108_1 beta-carotene hydroxylase [Vitis vinifera]
Length = 299
Score = 300 bits (767), Expect = 1e-80
Identities = 143/163 (87%), Positives = 149/163 (90%)
Frame = -3
Query: 589 VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFHKG 410
VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAI+LLSYG F+KG
Sbjct: 145 VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAISLLSYGLFNKG 204
Query: 409 LVPGLCFGAGLGITVFGIAYMFVHDGLVHKRFPVGPIANVPYFRRVASAHQLHHSDKFNG 230
LVPGLCFGAGLGITVFG+AYMFVHDGLVH+RFPVGPIANVPY R+VASAHQLHHSDKFNG
Sbjct: 205 LVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIANVPYLRKVASAHQLHHSDKFNG 264
Query: 229 VPYGLFLGPMVWIFIVVQELEEVGGLEELEKEISRRKKSYTGS 101
VPYGLFLGPM ELEEVGG+EELEKEISRR KS S
Sbjct: 265 VPYGLFLGPM--------ELEEVGGMEELEKEISRRIKSSDSS 299
>emb|CAA70888.1| beta-carotene hydroxylase 2 [Capsicum annuum]
Length = 316
Score = 296 bits (759), Expect = 1e-79
Identities = 137/163 (84%), Positives = 148/163 (90%)
Frame = -3
Query: 589 VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFHKG 410
VGMEFWARWAHKALWHASLWHMHESHH+PREGPFELNDVFAIINAVPAIALL YGFFHKG
Sbjct: 162 VGMEFWARWAHKALWHASLWHMHESHHKPREGPFELNDVFAIINAVPAIALLDYGFFHKG 221
Query: 409 LVPGLCFGAGLGITVFGIAYMFVHDGLVHKRFPVGPIANVPYFRRVASAHQLHHSDKFNG 230
L+PGLCFGAGLGITVFG+AYMFVHDGLVHKRFPVGP+ANVPY R+VA+AH LHHS+KFNG
Sbjct: 222 LIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPVANVPYLRKVAAAHSLHHSEKFNG 281
Query: 229 VPYGLFLGPMVWIFIVVQELEEVGGLEELEKEISRRKKSYTGS 101
VPYGLFLGP +ELEEVGGLEELEKE++RR + GS
Sbjct: 282 VPYGLFLGP--------KELEEVGGLEELEKEVNRRTRYIKGS 316
>emb|CAB55626.1| beta-carotene hydroxylase [Lycopersicon esculentum]
Length = 314
Score = 296 bits (758), Expect = 1e-79
Identities = 138/162 (85%), Positives = 148/162 (91%)
Frame = -3
Query: 589 VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFHKG 410
VGME+WARWAH+ALWHASLWHMHESHHRPREGPFE+NDVFAI NAVPAI LLSYGFFHKG
Sbjct: 159 VGMEYWARWAHRALWHASLWHMHESHHRPREGPFEMNDVFAITNAVPAIGLLSYGFFHKG 218
Query: 409 LVPGLCFGAGLGITVFGIAYMFVHDGLVHKRFPVGPIANVPYFRRVASAHQLHHSDKFNG 230
+VPGLCFGAGLGITVFG+AYMFVHDGLVHKRFPVGPIANVPYFRRVA+AHQLHHSDKF+G
Sbjct: 219 IVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHSDKFDG 278
Query: 229 VPYGLFLGPMVWIFIVVQELEEVGGLEELEKEISRRKKSYTG 104
VPYGLFLGP +ELEEVGGLEELEKE++RR K G
Sbjct: 279 VPYGLFLGP--------KELEEVGGLEELEKEVNRRIKISKG 312
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 564,978,133
Number of Sequences: 1393205
Number of extensions: 13482739
Number of successful extensions: 43400
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 39100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42795
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
