Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003758A_C01 KMC003758A_c01
(401 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P81406|GAPN_PEA NADP-dependent glyceraldehyde-3-phosphate deh... 39 0.020
pir||S43832 glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC ... 39 0.020
gb|AAF08296.1|AF196292_1 nonreversible glyceraldehyde-3-phosphat... 38 0.026
sp|P93338|GAPN_NICPL NADP-dependent glyceraldehyde-3-phosphate d... 38 0.026
ref|NP_180004.1| putative NADP-dependent glyceraldehyde-3-phosph... 37 0.045
>sp|P81406|GAPN_PEA NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
(Non-phosphorylating glyceraldehyde 3-phosphate
dehydrogenase) (Glyceraldehyde-3-phosphate dehydrogenase
[NADP+]) (Triosephosphate dehydrogenase)
gi|4379384|emb|CAA53076.1| glyceraldehyde-3-phosphate
dehydrogenase (nonphosphorylating,NADP+) [Pisum sativum]
gi|28274680|gb|AAO38512.1| non-phosphorylating
glyceraldehyde-3-phosphate dehydrogenase [Pisum sativum]
Length = 496
Score = 38.5 bits (88), Expect = 0.020
Identities = 18/22 (81%), Positives = 19/22 (85%)
Frame = -1
Query: 371 INMMTKVKTTVINLPAPSLHYG 306
INMMTKVKTTVINLP+PS G
Sbjct: 475 INMMTKVKTTVINLPSPSYTMG 496
>pir||S43832 glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9) -
garden pea
Length = 496
Score = 38.5 bits (88), Expect = 0.020
Identities = 18/22 (81%), Positives = 19/22 (85%)
Frame = -1
Query: 371 INMMTKVKTTVINLPAPSLHYG 306
INMMTKVKTTVINLP+PS G
Sbjct: 475 INMMTKVKTTVINLPSPSYTMG 496
>gb|AAF08296.1|AF196292_1 nonreversible glyceraldehyde-3-phosphate dehydrogenase [Apium
graveolens]
Length = 496
Score = 38.1 bits (87), Expect = 0.026
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -1
Query: 371 INMMTKVKTTVINLPAPSLHYG 306
INMMTK+KTTVINLP+PS G
Sbjct: 475 INMMTKIKTTVINLPSPSYTMG 496
>sp|P93338|GAPN_NICPL NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
(Non-phosphorylating glyceraldehyde 3-phosphate
dehydrogenase) (Glyceraldehyde-3-phosphate dehydrogenase
[NADP+]) (Triosephosphate dehydrogenase)
gi|1842115|gb|AAB47571.1| non-phosphorylating
glyceraldehyde dehydrogenase [Nicotiana plumbaginifolia]
Length = 496
Score = 38.1 bits (87), Expect = 0.026
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1
Query: 371 INMMTKVKTTVINLPAPSLHYG 306
INMMTKVKTTVINLP PS G
Sbjct: 475 INMMTKVKTTVINLPTPSYTMG 496
>ref|NP_180004.1| putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase;
protein id: At2g24270.1, supported by cDNA: gi_14335051
[Arabidopsis thaliana] gi|25284182|pir||F84634
hypothetical protein At2g24270 [imported] - Arabidopsis
thaliana gi|4115387|gb|AAD03388.1| putative
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
[Arabidopsis thaliana] gi|14335052|gb|AAK59790.1|
At2g24270/F27D4.18 [Arabidopsis thaliana]
gi|22531142|gb|AAM97075.1| putative NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis
thaliana] gi|28416533|gb|AAO42797.1| At2g24270/F27D4.18
[Arabidopsis thaliana]
Length = 496
Score = 37.4 bits (85), Expect = 0.045
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -1
Query: 371 INMMTKVKTTVINLPAPSLHYG 306
IN+MTKVKTTVINLP PS G
Sbjct: 475 INLMTKVKTTVINLPTPSYSMG 496
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 296,809,650
Number of Sequences: 1393205
Number of extensions: 5535163
Number of successful extensions: 13504
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13345
length of database: 448,689,247
effective HSP length: 109
effective length of database: 296,829,902
effective search space used: 7123917648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
