Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003746A_C01 KMC003746A_c01
(536 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM23265.1| L-asparaginase [Glycine max] 115 4e-25
emb|CAC09349.1| putative l-asparaginase [Oryza sativa (indica cu... 108 4e-23
gb|AAG28786.1|AF308474_1 asparaginase [Hordeum vulgare] 105 3e-22
ref|NP_566536.1| putative L-asparaginase; protein id: At3g16150.... 104 8e-22
dbj|BAC42877.1| putative L-asparaginase [Arabidopsis thaliana] 104 8e-22
>gb|AAM23265.1| L-asparaginase [Glycine max]
Length = 326
Score = 115 bits (287), Expect = 4e-25
Identities = 53/59 (89%), Positives = 57/59 (95%)
Frame = -3
Query: 534 KGLGLQQAVDFVIKHRLDEGLAGLIAVSHTGEVAYGFNCNGMFRGCATEDGFMEVGIWE 358
KGL LQ+AVDFVIKHRLDEG+AGLIAVS+ GEVAYGFNCNGMFRGCATE+GFMEVGIWE
Sbjct: 268 KGLKLQEAVDFVIKHRLDEGMAGLIAVSNAGEVAYGFNCNGMFRGCATENGFMEVGIWE 326
>emb|CAC09349.1| putative l-asparaginase [Oryza sativa (indica cultivar-group)]
Length = 333
Score = 108 bits (270), Expect = 4e-23
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = -3
Query: 534 KGLGLQQAVDFVIKHRLDEGLAGLIAVSHTGEVAYGFNCNGMFRGCATEDGFMEVGIWE 358
+G GLQ+AVD+ +K RLDEG AGLIAVS TGEVAYGFNC GMFRGCATEDGFMEVGIWE
Sbjct: 275 RGAGLQEAVDYCVKERLDEGFAGLIAVSSTGEVAYGFNCTGMFRGCATEDGFMEVGIWE 333
>gb|AAG28786.1|AF308474_1 asparaginase [Hordeum vulgare]
Length = 333
Score = 105 bits (262), Expect = 3e-22
Identities = 49/59 (83%), Positives = 52/59 (88%)
Frame = -3
Query: 534 KGLGLQQAVDFVIKHRLDEGLAGLIAVSHTGEVAYGFNCNGMFRGCATEDGFMEVGIWE 358
+G LQ+AVDF +K RLDEG AGLIAVS TGEVAYGFNC GMFRGCATEDGFMEVGIWE
Sbjct: 275 RGCLLQEAVDFCVKERLDEGFAGLIAVSGTGEVAYGFNCTGMFRGCATEDGFMEVGIWE 333
>ref|NP_566536.1| putative L-asparaginase; protein id: At3g16150.1, supported by
cDNA: 21689. [Arabidopsis thaliana]
gi|9294462|dbj|BAB02681.1| l-asparaginase (l-asparagine
amidohydrolase) [Arabidopsis thaliana]
gi|21554260|gb|AAM63335.1| putative L-asparaginase
[Arabidopsis thaliana]
Length = 325
Score = 104 bits (259), Expect = 8e-22
Identities = 49/59 (83%), Positives = 52/59 (88%)
Frame = -3
Query: 534 KGLGLQQAVDFVIKHRLDEGLAGLIAVSHTGEVAYGFNCNGMFRGCATEDGFMEVGIWE 358
KGL LQ+AVD+VIKHRLDEG AGLIAVS+ GEV GFN NGMFRGCATEDGFMEV IWE
Sbjct: 267 KGLNLQEAVDYVIKHRLDEGFAGLIAVSNKGEVVCGFNSNGMFRGCATEDGFMEVAIWE 325
>dbj|BAC42877.1| putative L-asparaginase [Arabidopsis thaliana]
Length = 176
Score = 104 bits (259), Expect = 8e-22
Identities = 49/59 (83%), Positives = 52/59 (88%)
Frame = -3
Query: 534 KGLGLQQAVDFVIKHRLDEGLAGLIAVSHTGEVAYGFNCNGMFRGCATEDGFMEVGIWE 358
KGL LQ+AVD+VIKHRLDEG AGLIAVS+ GEV GFN NGMFRGCATEDGFMEV IWE
Sbjct: 118 KGLNLQEAVDYVIKHRLDEGFAGLIAVSNKGEVVCGFNSNGMFRGCATEDGFMEVAIWE 176
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 530,586,850
Number of Sequences: 1393205
Number of extensions: 12196436
Number of successful extensions: 39273
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 37699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39218
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
