Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003733A_C02 KMC003733A_c02
(853 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T06329 symbiotic ammonium transport protein SAT1 - soybean ... 123 4e-27
ref|NP_195498.2| bHLH protein; protein id: At4g37850.1, supporte... 113 4e-24
gb|AAM10935.1|AF488563_1 putative bHLH transcription factor [Ara... 111 1e-23
pir||T06032 hypothetical protein T28I19.130 - Arabidopsis thalia... 102 7e-21
gb|AAM10934.1| putative bHLH transcription factor [Arabidopsis t... 102 7e-21
>pir||T06329 symbiotic ammonium transport protein SAT1 - soybean
gi|3399777|gb|AAC32828.1| symbiotic ammonium
transporter; nodulin [Glycine max]
Length = 347
Score = 123 bits (308), Expect = 4e-27
Identities = 65/132 (49%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
Frame = -1
Query: 853 VKVLKERLRLLEE-QNQHRAMESVLVVNNHQISNDDNSSSSCDDGTIIGSEEALPHLEAR 677
+K ++E++ LEE QN+ R +ESV++V Q+S+D SSS GT + EALP +EAR
Sbjct: 214 LKQMQEKVSALEEEQNRKRTVESVVIVKKSQLSSDAEDSSSETGGTFV---EALPEIEAR 270
Query: 676 VSEKDVLLRLHCKKQKGLLLKILFEIQNLHLFVVNSSVLPFGDSILDITIVAQMGAEYNL 497
E++VL+R+HC+K KG++ K + EI+ LHL V+NSS L FG ILDITI+AQM E+ +
Sbjct: 271 FWERNVLIRIHCEKNKGVIEKTISEIEKLHLKVINSSALTFGSFILDITIIAQMDMEFCM 330
Query: 496 TINELVKNLRVA 461
T+ +LV++LR A
Sbjct: 331 TVKDLVRSLRSA 342
>ref|NP_195498.2| bHLH protein; protein id: At4g37850.1, supported by cDNA:
gi_20127021 [Arabidopsis thaliana]
gi|20127022|gb|AAM10937.1| putative bHLH transcription
factor [Arabidopsis thaliana]
Length = 304
Score = 113 bits (282), Expect = 4e-24
Identities = 61/134 (45%), Positives = 97/134 (71%), Gaps = 3/134 (2%)
Frame = -1
Query: 853 VKVLKERLRLLEEQNQHRAMESVLVVNNHQISNDDNS---SSSCDDGTIIGSEEALPHLE 683
+K L+ER+ LEEQ + R +ES+++V ++ DDN+ SSSC+DG S+ LP +E
Sbjct: 170 IKYLQERVGELEEQKKERRLESMVLVKKSKLILDDNNQSFSSSCEDGF---SDLDLPEIE 226
Query: 682 ARVSEKDVLLRLHCKKQKGLLLKILFEIQNLHLFVVNSSVLPFGDSILDITIVAQMGAEY 503
R S++DVL+++ C+KQKG L KI+ EI+ LH+ + NSSVL FG + LDITI+A+ +++
Sbjct: 227 VRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSVLNFGPT-LDITIIAKKESDF 285
Query: 502 NLTINELVKNLRVA 461
++T+ ++VK+LR A
Sbjct: 286 DMTLMDVVKSLRSA 299
>gb|AAM10935.1|AF488563_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 295
Score = 111 bits (278), Expect = 1e-23
Identities = 57/133 (42%), Positives = 93/133 (69%), Gaps = 2/133 (1%)
Frame = -1
Query: 853 VKVLKERLRLLEEQNQH-RAMESVLVVNNHQISNDDNSSSSCDDGTIIGSEEALPHLEAR 677
+K L+E+LR L+E+ + R MES+++V ++ D+ + SC I ++ALP +EA+
Sbjct: 161 MKQLQEQLRTLKEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAK 220
Query: 676 VSEKDVLLRLHCKKQKGLLLKILFEIQNLHLFVVNSSVLPFGDSILDITIVAQMGAEYNL 497
+S+ D+L+R+ C+K KG ++ IL I+N L + NS VLPFGDS LDIT++AQM ++++
Sbjct: 221 ISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQMDKDFSM 280
Query: 496 TI-NELVKNLRVA 461
+I +LV+NLR A
Sbjct: 281 SILKDLVRNLRPA 293
>pir||T06032 hypothetical protein T28I19.130 - Arabidopsis thaliana
gi|4490730|emb|CAB38933.1| putative protein [Arabidopsis
thaliana] gi|7270768|emb|CAB80450.1| putative protein
[Arabidopsis thaliana]
Length = 314
Score = 102 bits (254), Expect = 7e-21
Identities = 63/141 (44%), Positives = 94/141 (65%), Gaps = 8/141 (5%)
Frame = -1
Query: 853 VKVLKERLRLLEEQNQHRAMESVLVVNNHQISNDDNS---SSSCDDGTIIGSEEALPHLE 683
+K L+ER+ LEEQ + R +ES+++V ++ DDN+ SSSC+DG S+ LP +E
Sbjct: 170 IKYLQERVGELEEQKKERRLESMVLVKKSKLILDDNNQSFSSSCEDGF---SDLDLPEIE 226
Query: 682 ARVSEKDVLLRLHCKKQKGLLLKILFEIQNLHLFVVNSSVLPFGDSILDITIVAQM-GAE 506
R S++DVL+++ C+KQKG L KI+ EI+ LH+ + NSSVL FG + LDITI+A++
Sbjct: 227 VRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSSVLNFGPT-LDITIIAKVCKCI 285
Query: 505 YNLTI----NELVKNLRVAAL 455
+ T+ ELV N RV +L
Sbjct: 286 FRHTLIHINEELVLNFRVTSL 306
>gb|AAM10934.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 102 bits (254), Expect = 7e-21
Identities = 58/131 (44%), Positives = 87/131 (66%), Gaps = 3/131 (2%)
Frame = -1
Query: 853 VKVLKERLRLLEEQNQHRAMESVLVVNNHQISNDDN---SSSSCDDGTIIGSEEALPHLE 683
+K L+E ++ EEQ + + MESV++V + D+N SSSS DG S LP +E
Sbjct: 168 IKYLQESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIE 227
Query: 682 ARVSEKDVLLRLHCKKQKGLLLKILFEIQNLHLFVVNSSVLPFGDSILDITIVAQMGAEY 503
RVS KDVL+++ C+KQKG ++KI+ EI+ L L + NS+VLPFG + DI+I+AQ +
Sbjct: 228 VRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGPT-FDISIIAQ-NNNF 285
Query: 502 NLTINELVKNL 470
++ I ++VKNL
Sbjct: 286 DMKIEDVVKNL 296
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 747,195,733
Number of Sequences: 1393205
Number of extensions: 16446574
Number of successful extensions: 44195
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 41878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44154
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 44873636157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
