Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003727A_C01 KMC003727A_c01
(521 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_568369.1| putative protein; protein id: At5g19150.1, supp... 135 4e-31
dbj|BAB14863.1| unnamed protein product [Homo sapiens] 57 1e-07
gb|AAH41028.1| Similar to hypothetical protein FLJ10769 [Homo sa... 57 1e-07
ref|XP_214401.1| similar to hypothetical protein FLJ10769 [Homo ... 57 1e-07
gb|EAA00337.1| agCP9329 [Anopheles gambiae str. PEST] 56 2e-07
>ref|NP_568369.1| putative protein; protein id: At5g19150.1, supported by cDNA:
gi_15081665, supported by cDNA: gi_20856360 [Arabidopsis
thaliana] gi|15081666|gb|AAK82488.1| AT5g19150/T24G5_50
[Arabidopsis thaliana] gi|20856361|gb|AAM26662.1|
AT5g19150/T24G5_50 [Arabidopsis thaliana]
Length = 365
Score = 135 bits (339), Expect = 4e-31
Identities = 69/95 (72%), Positives = 80/95 (83%)
Frame = -3
Query: 519 VKSVTIYGSPRRCGGQGDILSGSVAVFLSWARQHILAAGPDSNLSLTNPAVLGCIAGSAM 340
VKSV+IYGSPRRCGGQGDILSG VAVFLSWA+Q L + P+S NPA+LGCIA S +
Sbjct: 274 VKSVSIYGSPRRCGGQGDILSGGVAVFLSWAQQ--LKSDPESPSE--NPAILGCIAASGL 329
Query: 339 MRKAATLAFSHKKRSTVTGDIIECLGKSLEDICPA 235
+RKAA+LAF+ KRST+T DIIECLG+SLEDICPA
Sbjct: 330 LRKAASLAFTKHKRSTLTSDIIECLGESLEDICPA 364
>dbj|BAB14863.1| unnamed protein product [Homo sapiens]
Length = 126
Score = 57.4 bits (137), Expect = 1e-07
Identities = 32/85 (37%), Positives = 47/85 (54%)
Frame = -3
Query: 498 GSPRRCGGQGDILSGSVAVFLSWARQHILAAGPDSNLSLTNPAVLGCIAGSAMMRKAATL 319
GS RRCGGQGD+LSGS+ V + WA L AGP + ++P ++ ++ R+
Sbjct: 44 GSSRRCGGQGDLLSGSLGVLVHWA----LLAGPQKT-NGSSPLLVAAFGACSLTRQCNHQ 98
Query: 318 AFSHKKRSTVTGDIIECLGKSLEDI 244
AF RST T D+I +G + +
Sbjct: 99 AFQKHGRSTTTSDMIAEVGAAFSKL 123
>gb|AAH41028.1| Similar to hypothetical protein FLJ10769 [Homo sapiens]
Length = 347
Score = 57.4 bits (137), Expect = 1e-07
Identities = 32/85 (37%), Positives = 47/85 (54%)
Frame = -3
Query: 498 GSPRRCGGQGDILSGSVAVFLSWARQHILAAGPDSNLSLTNPAVLGCIAGSAMMRKAATL 319
GS RRCGGQGD+LSGS+ V + WA L AGP + ++P ++ ++ R+
Sbjct: 265 GSSRRCGGQGDLLSGSLGVLVHWA----LLAGPQKT-NGSSPLLVAAFGACSLTRQCNHQ 319
Query: 318 AFSHKKRSTVTGDIIECLGKSLEDI 244
AF RST T D+I +G + +
Sbjct: 320 AFQKHGRSTTTSDMIAEVGAAFSKL 344
>ref|XP_214401.1| similar to hypothetical protein FLJ10769 [Homo sapiens] [Rattus
norvegicus]
Length = 126
Score = 57.0 bits (136), Expect = 1e-07
Identities = 33/85 (38%), Positives = 47/85 (54%)
Frame = -3
Query: 498 GSPRRCGGQGDILSGSVAVFLSWARQHILAAGPDSNLSLTNPAVLGCIAGSAMMRKAATL 319
GS RRCGGQGD+LSGS+ V WA L AGP+ + ++P ++ + R+ L
Sbjct: 44 GSSRRCGGQGDLLSGSLGVMAHWA----LRAGPEKT-NGSSPLLVAAWGACTLTRECNHL 98
Query: 318 AFSHKKRSTVTGDIIECLGKSLEDI 244
AF RST T D+I +G + +
Sbjct: 99 AFQKYGRSTTTTDMIAEVGAAFSKL 123
>gb|EAA00337.1| agCP9329 [Anopheles gambiae str. PEST]
Length = 295
Score = 56.2 bits (134), Expect = 2e-07
Identities = 30/85 (35%), Positives = 45/85 (52%)
Frame = -3
Query: 498 GSPRRCGGQGDILSGSVAVFLSWARQHILAAGPDSNLSLTNPAVLGCIAGSAMMRKAATL 319
GS RRCGGQGD+L+GS+A F WA + + +PA++ C A S + +
Sbjct: 214 GSGRRCGGQGDLLAGSLATFYYWALE---------SKQEISPAMVACFAASTLTKTCNKY 264
Query: 318 AFSHKKRSTVTGDIIECLGKSLEDI 244
AF K RS D+I+ + +D+
Sbjct: 265 AFKLKGRSMTCSDMIDQIHPVFDDL 289
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 464,606,030
Number of Sequences: 1393205
Number of extensions: 10060699
Number of successful extensions: 23740
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 23157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23734
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16731298976
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
