Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003726A_C01 KMC003726A_c01
(646 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196951.1| putative protein; protein id: At5g14470.1 [Arab... 211 9e-54
ref|NP_566144.1| expressed protein; protein id: At3g01640.1, sup... 208 6e-53
gb|AAL15261.1| AT3g01640/F4P13_18 [Arabidopsis thaliana] gi|2265... 208 6e-53
gb|AAF01548.1|AC009325_18 unknown protein [Arabidopsis thaliana] 208 6e-53
gb|AAB38535.1| unknown protein 038 [Phalaenopsis sp. SM9108] 116 2e-25
>ref|NP_196951.1| putative protein; protein id: At5g14470.1 [Arabidopsis thaliana]
gi|11357550|pir||T48620 hypothetical protein F18O22.260
- Arabidopsis thaliana gi|7573472|emb|CAB87786.1|
putative protein [Arabidopsis thaliana]
Length = 366
Score = 211 bits (536), Expect = 9e-54
Identities = 102/147 (69%), Positives = 124/147 (83%)
Frame = -2
Query: 645 PLYLIYAVNPRDSGKVHSKVRQRWLDGDKFIVSSMLEVANIAKEGKTALEEKDYSKFAAL 466
PL+LIYA NP DSGKVHS VR+RWLDGD+FI+SSM E+A +A+EG+TAL +KDYS L
Sbjct: 217 PLHLIYAENPSDSGKVHSTVRRRWLDGDEFIISSMAEIAKLAEEGRTALLKKDYSNLKEL 276
Query: 465 MNRNFELRRLMFGDEALGDVNIKMVEVARKVGAASKFTGSGGAVVAFCPEGTSQVKRLED 286
MNRNF+LRR MFGDE LG +NI+MVEVARK+GAA+KFTGSGGAVV FCPEG SQVK LE+
Sbjct: 277 MNRNFDLRRSMFGDECLGAMNIEMVEVARKIGAAAKFTGSGGAVVVFCPEGPSQVKLLEE 336
Query: 285 ECHKAGFEMELLEPFPSRLNEFDLKTL 205
EC K+GF +E ++ P+RL+ D+KTL
Sbjct: 337 ECRKSGFIVEPVKLVPTRLSSSDIKTL 363
>ref|NP_566144.1| expressed protein; protein id: At3g01640.1, supported by cDNA:
gi_16323052 [Arabidopsis thaliana]
Length = 376
Score = 208 bits (529), Expect = 6e-53
Identities = 102/147 (69%), Positives = 123/147 (83%)
Frame = -2
Query: 645 PLYLIYAVNPRDSGKVHSKVRQRWLDGDKFIVSSMLEVANIAKEGKTALEEKDYSKFAAL 466
PL+LIYA NP DSGKVHS VRQRWLDGD+FI+SSM EV ++A+EG+TAL KD+SK L
Sbjct: 230 PLHLIYAENPSDSGKVHSMVRQRWLDGDEFIISSMKEVGSLAEEGRTALLNKDHSKLVEL 289
Query: 465 MNRNFELRRLMFGDEALGDVNIKMVEVARKVGAASKFTGSGGAVVAFCPEGTSQVKRLED 286
MN NF++RR MFGDE LG +NI+MVEVAR+VGAASKFTGSGGAVV FCPEG SQVK LE+
Sbjct: 290 MNLNFDIRRRMFGDECLGAMNIEMVEVARRVGAASKFTGSGGAVVVFCPEGPSQVKLLEE 349
Query: 285 ECHKAGFEMELLEPFPSRLNEFDLKTL 205
EC KAGF ++ ++ PS LN+ D++TL
Sbjct: 350 ECRKAGFTLQPVKIAPSCLNDSDIQTL 376
>gb|AAL15261.1| AT3g01640/F4P13_18 [Arabidopsis thaliana]
gi|22655334|gb|AAM98259.1| At3g01640/F4P13_18
[Arabidopsis thaliana]
Length = 362
Score = 208 bits (529), Expect = 6e-53
Identities = 102/147 (69%), Positives = 123/147 (83%)
Frame = -2
Query: 645 PLYLIYAVNPRDSGKVHSKVRQRWLDGDKFIVSSMLEVANIAKEGKTALEEKDYSKFAAL 466
PL+LIYA NP DSGKVHS VRQRWLDGD+FI+SSM EV ++A+EG+TAL KD+SK L
Sbjct: 216 PLHLIYAENPSDSGKVHSMVRQRWLDGDEFIISSMKEVGSLAEEGRTALLNKDHSKLVEL 275
Query: 465 MNRNFELRRLMFGDEALGDVNIKMVEVARKVGAASKFTGSGGAVVAFCPEGTSQVKRLED 286
MN NF++RR MFGDE LG +NI+MVEVAR+VGAASKFTGSGGAVV FCPEG SQVK LE+
Sbjct: 276 MNLNFDIRRRMFGDECLGAMNIEMVEVARRVGAASKFTGSGGAVVVFCPEGPSQVKLLEE 335
Query: 285 ECHKAGFEMELLEPFPSRLNEFDLKTL 205
EC KAGF ++ ++ PS LN+ D++TL
Sbjct: 336 ECRKAGFTLQPVKIAPSCLNDSDIQTL 362
>gb|AAF01548.1|AC009325_18 unknown protein [Arabidopsis thaliana]
Length = 268
Score = 208 bits (529), Expect = 6e-53
Identities = 102/147 (69%), Positives = 123/147 (83%)
Frame = -2
Query: 645 PLYLIYAVNPRDSGKVHSKVRQRWLDGDKFIVSSMLEVANIAKEGKTALEEKDYSKFAAL 466
PL+LIYA NP DSGKVHS VRQRWLDGD+FI+SSM EV ++A+EG+TAL KD+SK L
Sbjct: 122 PLHLIYAENPSDSGKVHSMVRQRWLDGDEFIISSMKEVGSLAEEGRTALLNKDHSKLVEL 181
Query: 465 MNRNFELRRLMFGDEALGDVNIKMVEVARKVGAASKFTGSGGAVVAFCPEGTSQVKRLED 286
MN NF++RR MFGDE LG +NI+MVEVAR+VGAASKFTGSGGAVV FCPEG SQVK LE+
Sbjct: 182 MNLNFDIRRRMFGDECLGAMNIEMVEVARRVGAASKFTGSGGAVVVFCPEGPSQVKLLEE 241
Query: 285 ECHKAGFEMELLEPFPSRLNEFDLKTL 205
EC KAGF ++ ++ PS LN+ D++TL
Sbjct: 242 ECRKAGFTLQPVKIAPSCLNDSDIQTL 268
>gb|AAB38535.1| unknown protein 038 [Phalaenopsis sp. SM9108]
Length = 215
Score = 116 bits (291), Expect = 2e-25
Identities = 57/89 (64%), Positives = 70/89 (78%)
Frame = -2
Query: 645 PLYLIYAVNPRDSGKVHSKVRQRWLDGDKFIVSSMLEVANIAKEGKTALEEKDYSKFAAL 466
PL+LIYA NP DSGKVHS V +RWLDGD+FI+SSM EVA +A +G AL E++ S+ A L
Sbjct: 122 PLHLIYAENPSDSGKVHSTVHKRWLDGDQFIISSMEEVAKLALDGHKALTERNNSELAKL 181
Query: 465 MNRNFELRRLMFGDEALGDVNIKMVEVAR 379
MN NF+LRR MFGD+ LG +NI+MV AR
Sbjct: 182 MNSNFDLRRKMFGDDVLGALNIQMVATAR 210
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 494,870,710
Number of Sequences: 1393205
Number of extensions: 9873166
Number of successful extensions: 25570
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 24682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25552
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27291941472
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
