Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003710A_C01 KMC003710A_c01
(520 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_174746.1| phosphate-induced (phi-1) protein, putative; pr... 93 3e-37
dbj|BAA33810.1| phi-1 [Nicotiana tabacum] 93 7e-36
ref|NP_201231.1| phi-1-like protein; protein id: At5g64260.1, su... 87 7e-31
ref|NP_196506.1| putative protein; protein id: At5g09440.1, supp... 66 7e-25
gb|AAM08535.1|AC079935_7 Putative protein with similarity to phi... 62 3e-22
>ref|NP_174746.1| phosphate-induced (phi-1) protein, putative; protein id:
At1g35140.1, supported by cDNA: 118937., supported by
cDNA: gi_13358189 [Arabidopsis thaliana]
gi|25371902|pir||H86471 probable phosphate-induced
(phi-1) protein [imported] - Arabidopsis thaliana
gi|12320953|gb|AAG50598.1|AC079605_3 phosphate-induced
(phi-1) protein, putative [Arabidopsis thaliana]
gi|21537055|gb|AAM61396.1| phosphate-induced protein
phi-1, putative [Arabidopsis thaliana]
Length = 309
Score = 93.2 bits (230), Expect(3) = 3e-37
Identities = 41/52 (78%), Positives = 47/52 (89%)
Frame = -2
Query: 519 PIYGPQSPALVAPNNDVGLDGMVINMASLLAGTVTNPFGNEYFQGPKEAPLD 364
P+YGPQSP LVAPNNDVGLDGMVIN+ASL+A T TNPFG+ Y+QGPK APL+
Sbjct: 200 PVYGPQSPPLVAPNNDVGLDGMVINLASLMAATATNPFGDGYYQGPKTAPLE 251
Score = 75.1 bits (183), Expect(3) = 3e-37
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = -1
Query: 331 KGLSPGYTGELLVDAATGASYNANGVNGRRFLVPALFDPTTSTCSTL 191
KG PGY GELLVDA TG SYN G+NGR++L+PALFDP T +CSTL
Sbjct: 262 KGSYPGYAGELLVDATTGGSYNVKGLNGRKYLLPALFDPKTDSCSTL 308
Score = 28.9 bits (63), Expect(3) = 3e-37
Identities = 13/21 (61%), Positives = 14/21 (65%)
Frame = -3
Query: 380 KRRRLTAASACAGVYGKGA*P 318
K L A SAC GVYGKG+ P
Sbjct: 246 KTAPLEAGSACTGVYGKGSYP 266
>dbj|BAA33810.1| phi-1 [Nicotiana tabacum]
Length = 313
Score = 93.2 bits (230), Expect(2) = 7e-36
Identities = 42/52 (80%), Positives = 47/52 (89%)
Frame = -2
Query: 519 PIYGPQSPALVAPNNDVGLDGMVINMASLLAGTVTNPFGNEYFQGPKEAPLD 364
PIYGPQSP LVAPNNDVG+DGMVIN+ASLLAGT TNPFGN Y+QG +APL+
Sbjct: 204 PIYGPQSPPLVAPNNDVGVDGMVINLASLLAGTATNPFGNGYYQGEADAPLE 255
Score = 79.0 bits (193), Expect(2) = 7e-36
Identities = 35/52 (67%), Positives = 42/52 (80%)
Frame = -1
Query: 346 PVCMVKGLSPGYTGELLVDAATGASYNANGVNGRRFLVPALFDPTTSTCSTL 191
P KG PGY G+LLVD TGASYNA+G NGR++L+PAL+DP+TSTCSTL
Sbjct: 261 PGVYAKGAYPGYAGDLLVDKTTGASYNAHGTNGRKYLLPALYDPSTSTCSTL 312
>ref|NP_201231.1| phi-1-like protein; protein id: At5g64260.1, supported by cDNA:
37357., supported by cDNA: gi_11908087, supported by
cDNA: gi_12642895, supported by cDNA: gi_14190476,
supported by cDNA: gi_16323269 [Arabidopsis thaliana]
gi|11908088|gb|AAG41473.1|AF326891_1 putative phi-1
protein [Arabidopsis thaliana]
gi|12642896|gb|AAK00390.1|AF339708_1 putative phi-1
protein [Arabidopsis thaliana]
gi|14190477|gb|AAK55719.1|AF380638_1 AT5g64260/MSJ1_10
[Arabidopsis thaliana] gi|16323270|gb|AAL15369.1|
AT5g64260/MSJ1_10 [Arabidopsis thaliana]
gi|21593241|gb|AAM65190.1| phi-1-like protein
[Arabidopsis thaliana]
Length = 305
Score = 87.0 bits (214), Expect(3) = 7e-31
Identities = 38/52 (73%), Positives = 45/52 (86%)
Frame = -2
Query: 519 PIYGPQSPALVAPNNDVGLDGMVINMASLLAGTVTNPFGNEYFQGPKEAPLD 364
PIYGPQ+P LVAPN DVG+DGM+IN+A+LLA TVTNPF N Y+QGP APL+
Sbjct: 196 PIYGPQTPPLVAPNGDVGVDGMIINLATLLANTVTNPFNNGYYQGPPTAPLE 247
Score = 64.3 bits (155), Expect(3) = 7e-31
Identities = 27/46 (58%), Positives = 36/46 (77%)
Frame = -1
Query: 328 GLSPGYTGELLVDAATGASYNANGVNGRRFLVPALFDPTTSTCSTL 191
G PGY G +LVD TG+SYNA G+ GR++L+PA++DP +STC TL
Sbjct: 259 GSYPGYAGRVLVDKTTGSSYNARGLAGRKYLLPAMWDPQSSTCKTL 304
Score = 24.3 bits (51), Expect(3) = 7e-31
Identities = 9/17 (52%), Positives = 12/17 (69%)
Frame = -3
Query: 368 LTAASACAGVYGKGA*P 318
L A SAC G++G G+ P
Sbjct: 246 LEAVSACPGIFGSGSYP 262
>ref|NP_196506.1| putative protein; protein id: At5g09440.1, supported by cDNA:
38576., supported by cDNA: gi_17473690, supported by
cDNA: gi_20148462 [Arabidopsis thaliana]
gi|9955531|emb|CAC05470.1| putative protein [Arabidopsis
thaliana] gi|17473691|gb|AAL38302.1| putative protein
[Arabidopsis thaliana] gi|20148463|gb|AAM10122.1|
putative protein [Arabidopsis thaliana]
gi|21593400|gb|AAM65367.1| phi-1-like protein
[Arabidopsis thaliana]
Length = 278
Score = 65.9 bits (159), Expect(3) = 7e-25
Identities = 29/37 (78%), Positives = 33/37 (88%)
Frame = -2
Query: 519 PIYGPQSPALVAPNNDVGLDGMVINMASLLAGTVTNP 409
PIYGPQSP LVAPN DVG+DGM+IN+A+LL TVTNP
Sbjct: 181 PIYGPQSPPLVAPNGDVGVDGMIINIATLLVNTVTNP 217
Score = 64.7 bits (156), Expect(3) = 7e-25
Identities = 28/46 (60%), Positives = 36/46 (77%)
Frame = -1
Query: 328 GLSPGYTGELLVDAATGASYNANGVNGRRFLVPALFDPTTSTCSTL 191
G PGY G +LVD +GASYNA G+ GR++L+PAL+DP TSTC T+
Sbjct: 232 GAYPGYAGRVLVDKTSGASYNALGLAGRKYLLPALWDPQTSTCKTM 277
Score = 24.6 bits (52), Expect(3) = 7e-25
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 362 AASACAGVYGKGA*P 318
A SAC G++G GA P
Sbjct: 221 AVSACTGIFGSGAYP 235
>gb|AAM08535.1|AC079935_7 Putative protein with similarity to phi-1 [Oryza sativa]
Length = 334
Score = 62.0 bits (149), Expect(3) = 3e-22
Identities = 27/44 (61%), Positives = 35/44 (79%)
Frame = -2
Query: 495 ALVAPNNDVGLDGMVINMASLLAGTVTNPFGNEYFQGPKEAPLD 364
AL APN D G+DG+VIN+A+L+AG VTNP+G YFQG AP++
Sbjct: 233 ALRAPNGDAGVDGVVINLAALMAGAVTNPYGRGYFQGDAAAPVE 276
Score = 58.9 bits (141), Expect(3) = 3e-22
Identities = 27/44 (61%), Positives = 31/44 (70%)
Frame = -1
Query: 331 KGLSPGYTGELLVDAATGASYNANGVNGRRFLVPALFDPTTSTC 200
+G PGY G + VDAATGA YN G NGRR+LVPAL DP +C
Sbjct: 287 RGAYPGYPGAVRVDAATGAGYNVVGRNGRRYLVPALVDPDNYSC 330
Score = 25.4 bits (54), Expect(3) = 3e-22
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 359 ASACAGVYGKGA*P 318
A AC GVYG+GA P
Sbjct: 278 AGACPGVYGRGAYP 291
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 449,539,807
Number of Sequences: 1393205
Number of extensions: 10030149
Number of successful extensions: 26278
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 25563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26264
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16442828304
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
