Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003687A_C01 KMC003687A_c01
(744 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL18924.1|AF429383_1 acetyl Co-A acetyltransferase [Hevea br... 146 3e-34
ref|NP_568694.1| acetyl-CoA C-acetyltransferase; protein id: At5... 145 5e-34
gb|AAM00280.1|AF364059_1 acetoacetyl-CoA thiolase [Arabidopsis t... 145 5e-34
dbj|BAA97003.1| acetyl-CoA C-acetyltransferase [Arabidopsis thal... 145 5e-34
pir||T10247 acetyl-CoA C-acetyltransferase (EC 2.3.1.9), cytosol... 144 1e-33
>gb|AAL18924.1|AF429383_1 acetyl Co-A acetyltransferase [Hevea brasiliensis]
Length = 411
Score = 146 bits (368), Expect = 3e-34
Identities = 70/80 (87%), Positives = 76/80 (94%)
Frame = -3
Query: 742 YEINEAFSVVALANQKLLGLNSEKVNVHGGAVSLGHPLGCSGARILVTLLGVLKQKNGKY 563
YEINEAFSVVALANQK+LGLN EK+NVHGGAVSLGHPLGCSGARILVTLLGVL+ KNGKY
Sbjct: 322 YEINEAFSVVALANQKILGLNPEKLNVHGGAVSLGHPLGCSGARILVTLLGVLRHKNGKY 381
Query: 562 GVGGVCNGGGGASALVVELL 503
GV +CNGGGGASALV+EL+
Sbjct: 382 GVASICNGGGGASALVLELM 401
>ref|NP_568694.1| acetyl-CoA C-acetyltransferase; protein id: At5g48230.1, supported
by cDNA: gi_16604582, supported by cDNA: gi_20258988
[Arabidopsis thaliana] gi|16604583|gb|AAL24148.1|
putative acetyl-CoA C-acetyltransferase [Arabidopsis
thaliana] gi|20258989|gb|AAM14210.1| putative acetyl-CoA
C-acetyltransferase [Arabidopsis thaliana]
Length = 398
Score = 145 bits (367), Expect = 5e-34
Identities = 70/80 (87%), Positives = 78/80 (97%)
Frame = -3
Query: 742 YEINEAFSVVALANQKLLGLNSEKVNVHGGAVSLGHPLGCSGARILVTLLGVLKQKNGKY 563
YEINEAF+VVALANQKLLG+ EKVNV+GGAVSLGHPLGCSGARIL+TLLG+LK++NGKY
Sbjct: 319 YEINEAFAVVALANQKLLGIAPEKVNVNGGAVSLGHPLGCSGARILITLLGILKKRNGKY 378
Query: 562 GVGGVCNGGGGASALVVELL 503
GVGGVCNGGGGASALV+ELL
Sbjct: 379 GVGGVCNGGGGASALVLELL 398
>gb|AAM00280.1|AF364059_1 acetoacetyl-CoA thiolase [Arabidopsis thaliana]
Length = 403
Score = 145 bits (367), Expect = 5e-34
Identities = 70/80 (87%), Positives = 78/80 (97%)
Frame = -3
Query: 742 YEINEAFSVVALANQKLLGLNSEKVNVHGGAVSLGHPLGCSGARILVTLLGVLKQKNGKY 563
YEINEAF+VVALANQKLLG+ EKVNV+GGAVSLGHPLGCSGARIL+TLLG+LK++NGKY
Sbjct: 324 YEINEAFAVVALANQKLLGIAPEKVNVNGGAVSLGHPLGCSGARILITLLGILKKRNGKY 383
Query: 562 GVGGVCNGGGGASALVVELL 503
GVGGVCNGGGGASALV+ELL
Sbjct: 384 GVGGVCNGGGGASALVLELL 403
>dbj|BAA97003.1| acetyl-CoA C-acetyltransferase [Arabidopsis thaliana]
Length = 486
Score = 145 bits (367), Expect = 5e-34
Identities = 70/80 (87%), Positives = 78/80 (97%)
Frame = -3
Query: 742 YEINEAFSVVALANQKLLGLNSEKVNVHGGAVSLGHPLGCSGARILVTLLGVLKQKNGKY 563
YEINEAF+VVALANQKLLG+ EKVNV+GGAVSLGHPLGCSGARIL+TLLG+LK++NGKY
Sbjct: 407 YEINEAFAVVALANQKLLGIAPEKVNVNGGAVSLGHPLGCSGARILITLLGILKKRNGKY 466
Query: 562 GVGGVCNGGGGASALVVELL 503
GVGGVCNGGGGASALV+ELL
Sbjct: 467 GVGGVCNGGGGASALVLELL 486
>pir||T10247 acetyl-CoA C-acetyltransferase (EC 2.3.1.9), cytosolic - radish
gi|1542941|emb|CAA55006.1| Acetoacetyl-coenzyme A
thiolase [Raphanus sativus]
Length = 406
Score = 144 bits (364), Expect = 1e-33
Identities = 68/80 (85%), Positives = 79/80 (98%)
Frame = -3
Query: 742 YEINEAFSVVALANQKLLGLNSEKVNVHGGAVSLGHPLGCSGARILVTLLGVLKQKNGKY 563
YEINEAF+VVALANQKLLG++ EKVNV+GGAVSLGHPLGCSGARIL+TLLG+LK++NGKY
Sbjct: 327 YEINEAFAVVALANQKLLGISPEKVNVNGGAVSLGHPLGCSGARILITLLGILKKRNGKY 386
Query: 562 GVGGVCNGGGGASALVVELL 503
GVGGVCNGGGGASALV+E++
Sbjct: 387 GVGGVCNGGGGASALVLEVV 406
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 633,679,201
Number of Sequences: 1393205
Number of extensions: 14149573
Number of successful extensions: 57251
Number of sequences better than 10.0: 597
Number of HSP's better than 10.0 without gapping: 46401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54873
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 35751090169
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
