Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003670A_C01 KMC003670A_c01
(662 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC42960.1| unknown protein [Arabidopsis thaliana] 189 2e-47
ref|NP_175400.1| hypothetical protein; protein id: At1g49780.1 [... 189 2e-47
ref|NP_566632.1| expressed protein; protein id: At3g19380.1, sup... 187 1e-46
gb|AAK69401.1|AF274564_1 immediate-early fungal elicitor protein... 74 2e-12
emb|CAD40820.1| OSJNBa0006B20.11 [Oryza sativa (japonica cultiva... 66 5e-10
>dbj|BAC42960.1| unknown protein [Arabidopsis thaliana]
Length = 421
Score = 189 bits (481), Expect = 2e-47
Identities = 98/134 (73%), Positives = 113/134 (84%), Gaps = 1/134 (0%)
Frame = -3
Query: 660 LIDRLA-DFEKCDAERALATVELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAA 484
LIDRLA DF++CD ER LATVELLCR+P GCA F HALTVP++VK IL++SDRATEYAA
Sbjct: 290 LIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAA 349
Query: 483 GALLSLCSESERLQMEAVAAGVLTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPQDSIGN 304
GALL+LC+ ER + EA AAG++TQLLLLVQSDCTERAKRKAQ+LLKLLRDSWP DS +
Sbjct: 350 GALLALCTAEERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVH 409
Query: 303 SDDFACSQLVVVPF 262
SDDF S+ V PF
Sbjct: 410 SDDFNRSE--VAPF 421
>ref|NP_175400.1| hypothetical protein; protein id: At1g49780.1 [Arabidopsis
thaliana] gi|25405336|pir||E96534 Hypothetical protein
[imported] - Arabidopsis thaliana
gi|10120432|gb|AAG13057.1|AC011807_16 Hypothetical
protein [Arabidopsis thaliana]
Length = 421
Score = 189 bits (481), Expect = 2e-47
Identities = 98/134 (73%), Positives = 113/134 (84%), Gaps = 1/134 (0%)
Frame = -3
Query: 660 LIDRLA-DFEKCDAERALATVELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAA 484
LIDRLA DF++CD ER LATVELLCR+P GCA F HALTVP++VK IL++SDRATEYAA
Sbjct: 290 LIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAA 349
Query: 483 GALLSLCSESERLQMEAVAAGVLTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPQDSIGN 304
GALL+LC+ ER + EA AAG++TQLLLLVQSDCTERAKRKAQ+LLKLLRDSWP DS +
Sbjct: 350 GALLALCTAEERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVH 409
Query: 303 SDDFACSQLVVVPF 262
SDDF S+ V PF
Sbjct: 410 SDDFNRSE--VAPF 421
>ref|NP_566632.1| expressed protein; protein id: At3g19380.1, supported by cDNA:
255040. [Arabidopsis thaliana]
gi|11994460|dbj|BAB02462.1|
gb|AAD21464.1~gene_id:MLD14.11~similar to unknown
protein [Arabidopsis thaliana]
gi|21554399|gb|AAM63504.1| unknown [Arabidopsis
thaliana]
Length = 421
Score = 187 bits (474), Expect = 1e-46
Identities = 98/135 (72%), Positives = 111/135 (81%), Gaps = 2/135 (1%)
Frame = -3
Query: 660 LIDRLA-DFEKCDAERALATVELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAA 484
LIDRLA DF++CD ERALATVELLCR P GCA F HALTVP+LVK IL++SDRATEYAA
Sbjct: 288 LIDRLAADFDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAA 347
Query: 483 GALLSLCSESERLQMEAVAAGVLTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPQ-DSIG 307
GALL+LC+ ER + EA AGV+ QLLL+VQS+CTERAK+KAQ LLKLLRDSWP +S
Sbjct: 348 GALLALCTAEERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPDYNSFA 407
Query: 306 NSDDFACSQLVVVPF 262
NSDDF CS VVPF
Sbjct: 408 NSDDFGCSS-QVVPF 421
>gb|AAK69401.1|AF274564_1 immediate-early fungal elicitor protein CMPG1 [Petroselinum
crispum] gi|14582202|gb|AAK69402.1|AF274565_1
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum]
Length = 442
Score = 73.6 bits (179), Expect = 2e-12
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Frame = -3
Query: 660 LIDRLADFEKCDAERALATVELLCRVPAGCAEFAGHALTVPMLVKIILKISDRATEYAAG 481
L++ L D +K E+AL ++ LC G + +ALT+P+LVK IL++SD ATE++
Sbjct: 310 LLEMLVDCDKSICEKALGVLDGLCLTNEGREKAYANALTMPVLVKKILRVSDLATEFSVS 369
Query: 480 ALLSLC----SESERLQMEAVAAGVLTQLLLLVQSDCTERAKRKAQLLLKLL 337
+ L SE + +EA+ G +LLLL+Q C E+ K KA LLKLL
Sbjct: 370 IVWKLSKNDKSEDGGVIVEALRVGAFQKLLLLLQFGCNEKIKDKATELLKLL 421
>emb|CAD40820.1| OSJNBa0006B20.11 [Oryza sativa (japonica cultivar-group)]
Length = 449
Score = 65.9 bits (159), Expect = 5e-10
Identities = 43/96 (44%), Positives = 56/96 (57%), Gaps = 2/96 (2%)
Frame = -3
Query: 615 ALATVELLCRVPAGCAEFAGHALTVPMLVK--IILKISDRATEYAAGALLSLCSESERLQ 442
ALA VE L AG A LV+ ++ S+ +E+A ALL++C ES +
Sbjct: 352 ALAAVEALAASEAGRMAVARAPGGTRALVRHVFMMNSSNDGSEHAVAALLAVCRESRAAR 411
Query: 441 MEAVAAGVLTQLLLLVQSDCTERAKRKAQLLLKLLR 334
EA AGV+T LLLL+QS C RAK KA+ LLKLL+
Sbjct: 412 SEAAGAGVVTLLLLLLQSQCGARAKAKARSLLKLLK 447
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 584,524,351
Number of Sequences: 1393205
Number of extensions: 14653682
Number of successful extensions: 227260
Number of sequences better than 10.0: 5016
Number of HSP's better than 10.0 without gapping: 91932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158959
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28572683052
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
