Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003663A_C01 KMC003663A_c01
(585 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_180654.1| aspartate aminotransferase (AAT1); protein id: ... 93 3e-18
pir||S22379 aspartate transaminase (EC 2.6.1.1) AAT3 precursor -... 92 4e-18
pir||S56678 aspartate transaminase (EC 2.6.1.1) precursor - soyb... 92 6e-18
pir||JC5125 aspartate transaminase (EC 2.6.1.1) precursor, mitoc... 91 1e-17
pir||T02971 probable aspartate transaminase (EC 2.6.1.1) - rice ... 89 3e-17
>ref|NP_180654.1| aspartate aminotransferase (AAT1); protein id: At2g30970.1,
supported by cDNA: 34360., supported by cDNA:
gi_16649084, supported by cDNA: gi_693687 [Arabidopsis
thaliana] gi|1168256|sp|P46643|AAT1_ARATH Aspartate
aminotransferase, mitochondrial precursor (Transaminase
A) gi|25287197|pir||H84714 aspartate aminotransferase
(AAT1) [imported] - Arabidopsis thaliana
gi|693688|gb|AAA79369.1| aspartate aminotransferase
gi|3201622|gb|AAC20731.1| aspartate aminotransferase
(AAT1) [Arabidopsis thaliana] gi|16649085|gb|AAL24394.1|
aspartate aminotransferase (AAT1) [Arabidopsis thaliana]
gi|22136256|gb|AAM91206.1| aspartate aminotransferase
AAT1 [Arabidopsis thaliana]
Length = 430
Score = 92.8 bits (229), Expect = 3e-18
Identities = 42/51 (82%), Positives = 48/51 (93%)
Frame = -1
Query: 585 CYTGLTPEQVDRLTNECHIYLTRNGRISMAGINSGNVAYVANAIHEVTKSS 433
CY+GLTPEQVDRLT+E HIY+TRNGRISMAG+ +GNV Y+ANAIHEVTKSS
Sbjct: 380 CYSGLTPEQVDRLTSEYHIYMTRNGRISMAGVTTGNVGYLANAIHEVTKSS 430
>pir||S22379 aspartate transaminase (EC 2.6.1.1) AAT3 precursor - proso millet
gi|20601|emb|CAA45024.1| aspartate aminotransferase
[Panicum miliaceum] gi|435459|dbj|BAA04993.1| aspartate
aminotransferase [Panicum miliaceum]
Length = 428
Score = 92.4 bits (228), Expect = 4e-18
Identities = 41/49 (83%), Positives = 47/49 (95%)
Frame = -1
Query: 585 CYTGLTPEQVDRLTNECHIYLTRNGRISMAGINSGNVAYVANAIHEVTK 439
CY+G+TPEQVDRLTNE HIY+TRNGRISMAG+ +GNVAY+ANAIHEVTK
Sbjct: 380 CYSGMTPEQVDRLTNEFHIYMTRNGRISMAGVTTGNVAYLANAIHEVTK 428
>pir||S56678 aspartate transaminase (EC 2.6.1.1) precursor - soybean
gi|710596|gb|AAA98603.1| mitochondrial aspartate
aminotransferase
Length = 427
Score = 91.7 bits (226), Expect = 6e-18
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = -1
Query: 585 CYTGLTPEQVDRLTNECHIYLTRNGRISMAGINSGNVAYVANAIHEVTKS 436
CY+GLTPEQVDR+TNE HIY+TRNGRISMAG+N+GNV YV +AIHEVTKS
Sbjct: 377 CYSGLTPEQVDRMTNEFHIYMTRNGRISMAGLNTGNVGYVLDAIHEVTKS 426
>pir||JC5125 aspartate transaminase (EC 2.6.1.1) precursor, mitochondrial - rice
gi|2696240|dbj|BAA23815.1| aspartate aminotransferase
[Oryza sativa (japonica cultivar-group)]
Length = 430
Score = 90.5 bits (223), Expect = 1e-17
Identities = 40/50 (80%), Positives = 47/50 (94%)
Frame = -1
Query: 585 CYTGLTPEQVDRLTNECHIYLTRNGRISMAGINSGNVAYVANAIHEVTKS 436
CY+G+TPEQVDRLT E HIY+TRNGRISMAG+ +GNVAY+ANAIHEVTK+
Sbjct: 380 CYSGMTPEQVDRLTKEFHIYMTRNGRISMAGVTTGNVAYLANAIHEVTKT 429
>pir||T02971 probable aspartate transaminase (EC 2.6.1.1) - rice (fragment)
gi|2696238|dbj|BAA23814.1| aspartate aminotransferase
[Oryza sativa (japonica cultivar-group)]
Length = 132
Score = 89.4 bits (220), Expect = 3e-17
Identities = 40/50 (80%), Positives = 47/50 (94%)
Frame = -1
Query: 585 CYTGLTPEQVDRLTNECHIYLTRNGRISMAGINSGNVAYVANAIHEVTKS 436
CY+G+TPEQV RLTNE HIY+TRNGRISMAG+ +GNVAY+ANAIHEVTK+
Sbjct: 82 CYSGMTPEQVVRLTNEYHIYMTRNGRISMAGVTTGNVAYLANAIHEVTKT 131
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 462,836,990
Number of Sequences: 1393205
Number of extensions: 9238639
Number of successful extensions: 21637
Number of sequences better than 10.0: 216
Number of HSP's better than 10.0 without gapping: 19960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21275
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21997688174
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
