Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003631A_C01 KMC003631A_c01
(666 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_194379.1| hypothetical protein; protein id: At4g26490.1 [... 80 2e-14
ref|NP_200416.1| unknown protein; protein id: At5g56050.1 [Arabi... 73 3e-12
ref|NP_172764.1| hypothetical protein; protein id: At1g13050.1 [... 50 3e-05
ref|NP_189266.1| hypothetical protein; protein id: At3g26350.1 [... 47 2e-04
ref|NP_200418.1| putative protein; protein id: At5g56070.1 [Arab... 44 0.002
>ref|NP_194379.1| hypothetical protein; protein id: At4g26490.1 [Arabidopsis
thaliana] gi|7486789|pir||T05055 hypothetical protein
M3E9.80 - Arabidopsis thaliana
gi|2982457|emb|CAA18221.1| hypothetical protein
[Arabidopsis thaliana] gi|7269501|emb|CAB79504.1|
hypothetical protein [Arabidopsis thaliana]
Length = 200
Score = 80.1 bits (196), Expect = 2e-14
Identities = 33/76 (43%), Positives = 56/76 (73%)
Frame = -3
Query: 664 LQSVKLMSNLMFLPQDVGVKLQGQVQSNRVNYYARGTYKVRFNMGHIHLSHWLHSVCHIE 485
L+ ++L+S+L+ LP + V+L+ Q+++N++ Y RGT+KV+ + G IH S+ LH C ++
Sbjct: 123 LEPIRLISSLVGLPVNHAVELRRQLENNKIEYEIRGTFKVKAHFGMIHYSYQLHGRCQLQ 182
Query: 484 MNGPPNGVLLARECTT 437
M GPP G+L++R CTT
Sbjct: 183 MTGPPTGILISRNCTT 198
>ref|NP_200416.1| unknown protein; protein id: At5g56050.1 [Arabidopsis thaliana]
gi|9758625|dbj|BAB09287.1| gene_id:MDA7.9~unknown
protein [Arabidopsis thaliana]
Length = 283
Score = 73.2 bits (178), Expect = 3e-12
Identities = 33/78 (42%), Positives = 53/78 (67%)
Frame = -3
Query: 664 LQSVKLMSNLMFLPQDVGVKLQGQVQSNRVNYYARGTYKVRFNMGHIHLSHWLHSVCHIE 485
L+ ++L+SNL+FLP + ++L+ QV SNR+ Y R ++V+ G IH S+ LH +C ++
Sbjct: 205 LEPIRLISNLVFLPVNHILELRRQVTSNRIAYEIRSNFRVKAIFGMIHYSYMLHGICQLQ 264
Query: 484 MNGPPNGVLLARECTTWR 431
++ PP G L+ R CTT R
Sbjct: 265 LSSPPAGGLVYRNCTTKR 282
>ref|NP_172764.1| hypothetical protein; protein id: At1g13050.1 [Arabidopsis
thaliana] gi|25402753|pir||E86264 protein F3F19.7
[imported] - Arabidopsis thaliana
gi|4850388|gb|AAD31058.1|AC007357_7 F3F19.7 [Arabidopsis
thaliana]
Length = 317
Score = 50.1 bits (118), Expect = 3e-05
Identities = 28/77 (36%), Positives = 41/77 (52%), Gaps = 1/77 (1%)
Frame = -3
Query: 658 SVKLMSNLMFLPQDVGVKLQGQVQSNRVNYYARGTYKVRFNMGHI-HLSHWLHSVCHIEM 482
S L+S+ + + LQ Q+ + V RGT+ R N+G + S+WLH+ C I +
Sbjct: 241 SFHLVSSQVQIQMIQSQDLQLQLGTGPVLLNLRGTFHARSNLGSLMRYSYWLHTQCSISL 300
Query: 481 NGPPNGVLLARECTTWR 431
N PP G + AR C T R
Sbjct: 301 NTPPAGTMRARRCNTKR 317
>ref|NP_189266.1| hypothetical protein; protein id: At3g26350.1 [Arabidopsis
thaliana] gi|9294293|dbj|BAB02195.1|
gb|AAD31058.1~gene_id:F20C19.7~similar to unknown
protein [Arabidopsis thaliana]
Length = 356
Score = 47.0 bits (110), Expect = 2e-04
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = -3
Query: 658 SVKLMSNLMFLPQDVGVKLQGQVQSNRVNYYARGTYKVRFNMGHI-HLSHWLHSVCHIEM 482
+V L+S+ + L +LQ Q+++ V RG + R ++G + S+ LH+ C + +
Sbjct: 280 NVHLVSSQVQLQATQSRELQRQIETGPVLLNLRGMFHARSHIGPLFRYSYKLHTHCSVSL 339
Query: 481 NGPPNGVLLARECTTWR 431
NGPP G + AR C T R
Sbjct: 340 NGPPLGAMRARRCNTKR 356
>ref|NP_200418.1| putative protein; protein id: At5g56070.1 [Arabidopsis thaliana]
gi|9758627|dbj|BAB09289.1|
gene_id:MDA7.12~pir||T05055~similar to unknown protein
[Arabidopsis thaliana]
Length = 119
Score = 43.9 bits (102), Expect = 0.002
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = -3
Query: 601 QGQVQSNRVNYYARGTYKVRFNMGHIHLSHWLHSVCHIEMNGPPNGVLLARECT 440
Q QV SN + Y ++V+ +G+I+ S+WL C +++ PP LL+R+ T
Sbjct: 47 QRQVTSNMIEYEIISRFRVKVVIGYINYSYWLKGSCQLQLTSPPADDLLSRKYT 100
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 531,718,740
Number of Sequences: 1393205
Number of extensions: 10679591
Number of successful extensions: 20810
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20805
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28855580904
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
