Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003628A_C01 KMC003628A_c01
(573 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM53276.1| quinone oxidoreductase-like protein [Arabidopsis ... 172 4e-42
ref|NP_197199.1| quinone oxidoreductase -like protein; protein i... 172 4e-42
gb|AAM65612.1| allyl alcohol dehydrogenase, putative [Arabidopsi... 171 6e-42
ref|NP_173956.1| allyl alcohol dehydrogenase, putative; protein ... 171 6e-42
ref|NP_197202.2| quinone oxidoreductase - like protein; protein ... 170 1e-41
>gb|AAM53276.1| quinone oxidoreductase-like protein [Arabidopsis thaliana]
Length = 345
Score = 172 bits (435), Expect = 4e-42
Identities = 85/116 (73%), Positives = 95/116 (81%)
Frame = -2
Query: 572 FENVGGKTLDAVLLNMKLRVRIAVCGMISQYNLSQHEDVSNLAQIIYKRIRMEGFNATDF 393
FENVGGK LDAVL+NM + RIAVCGMISQYNL E V NL+ IIYKRIR++GF +DF
Sbjct: 230 FENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDF 289
Query: 392 YPLYPKFLEFVLPHIREGKIVYVEDIAEGLGNGPAALVGLFSGRNVGKQVLVVARE 225
Y Y KFLEFVLPHIREGKI YVED+A+GL P ALVGLF G+NVGKQV+VVARE
Sbjct: 290 YDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
>ref|NP_197199.1| quinone oxidoreductase -like protein; protein id: At5g16970.1
[Arabidopsis thaliana] gi|2498731|sp|Q39172|P1_ARATH
Probable NADP-dependent oxidoreductase P1
gi|1362013|pir||S57611 probable NADPH2:quinone reductase
(EC 1.6.5.5) P1 [similarity] - Arabidopsis thaliana
gi|886428|emb|CAA89838.1| zeta-crystallin homologue
[Arabidopsis thaliana] gi|9755698|emb|CAC01710.1|
quinone oxidoreductase-like protein [Arabidopsis
thaliana]
Length = 345
Score = 172 bits (435), Expect = 4e-42
Identities = 85/116 (73%), Positives = 95/116 (81%)
Frame = -2
Query: 572 FENVGGKTLDAVLLNMKLRVRIAVCGMISQYNLSQHEDVSNLAQIIYKRIRMEGFNATDF 393
FENVGGK LDAVL+NM + RIAVCGMISQYNL E V NL+ IIYKRIR++GF +DF
Sbjct: 230 FENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDF 289
Query: 392 YPLYPKFLEFVLPHIREGKIVYVEDIAEGLGNGPAALVGLFSGRNVGKQVLVVARE 225
Y Y KFLEFVLPHIREGKI YVED+A+GL P ALVGLF G+NVGKQV+VVARE
Sbjct: 290 YDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
>gb|AAM65612.1| allyl alcohol dehydrogenase, putative [Arabidopsis thaliana]
Length = 351
Score = 171 bits (433), Expect = 6e-42
Identities = 83/116 (71%), Positives = 96/116 (82%)
Frame = -2
Query: 572 FENVGGKTLDAVLLNMKLRVRIAVCGMISQYNLSQHEDVSNLAQIIYKRIRMEGFNATDF 393
FENVGGK LDAVL+NMKL R+AVCGMISQYNL E V NL I+YKRI+++GF DF
Sbjct: 236 FENVGGKMLDAVLINMKLHGRVAVCGMISQYNLVDPEGVHNLPTILYKRIQLQGFGVCDF 295
Query: 392 YPLYPKFLEFVLPHIREGKIVYVEDIAEGLGNGPAALVGLFSGRNVGKQVLVVARE 225
Y YPKFL+FVLP+IREGKI YVEDIAEG +GP+AL+GLF G+NVGKQ+ VVARE
Sbjct: 296 YDKYPKFLDFVLPYIREGKITYVEDIAEGFESGPSALLGLFEGKNVGKQLFVVARE 351
>ref|NP_173956.1| allyl alcohol dehydrogenase, putative; protein id: At1g26320.1,
supported by cDNA: 40824. [Arabidopsis thaliana]
gi|25283007|pir||G86389 probable allyl alcohol
dehydrogenase [imported] - Arabidopsis thaliana
gi|12321187|gb|AAG50689.1|AC079829_22 allyl alcohol
dehydrogenase, putative [Arabidopsis thaliana]
gi|28392964|gb|AAO41917.1| putative allyl alcohol
dehydrogenase [Arabidopsis thaliana]
gi|28827314|gb|AAO50501.1| putative allyl alcohol
dehydrogenase [Arabidopsis thaliana]
Length = 351
Score = 171 bits (433), Expect = 6e-42
Identities = 83/116 (71%), Positives = 96/116 (82%)
Frame = -2
Query: 572 FENVGGKTLDAVLLNMKLRVRIAVCGMISQYNLSQHEDVSNLAQIIYKRIRMEGFNATDF 393
FENVGGK LDAVL+NMKL R+AVCGMISQYNL E V NL I+YKRI+++GF DF
Sbjct: 236 FENVGGKMLDAVLINMKLHGRVAVCGMISQYNLVDPEGVHNLPTILYKRIQLQGFGVCDF 295
Query: 392 YPLYPKFLEFVLPHIREGKIVYVEDIAEGLGNGPAALVGLFSGRNVGKQVLVVARE 225
Y YPKFL+FVLP+IREGKI YVEDIAEG +GP+AL+GLF G+NVGKQ+ VVARE
Sbjct: 296 YDKYPKFLDFVLPYIREGKITYVEDIAEGFESGPSALLGLFEGKNVGKQLFVVARE 351
>ref|NP_197202.2| quinone oxidoreductase - like protein; protein id: At5g17000.1,
supported by cDNA: gi_16604343, supported by cDNA:
gi_17529139 [Arabidopsis thaliana]
gi|16604344|gb|AAL24178.1| AT5g16970/F2K13_120
[Arabidopsis thaliana] gi|23297366|gb|AAN12951.1|
putative quinone oxidoreductase [Arabidopsis thaliana]
Length = 345
Score = 170 bits (430), Expect = 1e-41
Identities = 84/116 (72%), Positives = 94/116 (80%)
Frame = -2
Query: 572 FENVGGKTLDAVLLNMKLRVRIAVCGMISQYNLSQHEDVSNLAQIIYKRIRMEGFNATDF 393
FENVGGK LDAVLLNM RIAVCGMISQYNL E V NL+ IIYKRIR++GF DF
Sbjct: 230 FENVGGKMLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFAVFDF 289
Query: 392 YPLYPKFLEFVLPHIREGKIVYVEDIAEGLGNGPAALVGLFSGRNVGKQVLVVARE 225
Y Y KFL+FVLPHI+EGKI YVED+A+GL GP ALVGLF G+NVGKQV+V+ARE
Sbjct: 290 YEKYSKFLDFVLPHIKEGKITYVEDVADGLEKGPEALVGLFHGKNVGKQVVVIARE 345
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 479,293,298
Number of Sequences: 1393205
Number of extensions: 10104893
Number of successful extensions: 27090
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 25927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26990
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21243732558
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
