Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003624A_C01 KMC003624A_c01
(568 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196726.1| lysophospholipase - like protein; protein id: A... 132 2e-30
gb|AAM62693.1| lysophospholipase-like protein [Arabidopsis thali... 132 2e-30
dbj|BAB89422.1| lysophospholipase - like [Oryza sativa (japonica... 128 6e-29
pir||T02661 lysophospholipase homolog - rice gi|2801536|gb|AAB97... 113 2e-24
pir||H86317 protein F15H18.13 [imported] - Arabidopsis thaliana ... 97 1e-19
>ref|NP_196726.1| lysophospholipase - like protein; protein id: At5g11650.1,
supported by cDNA: 15284. [Arabidopsis thaliana]
gi|11358494|pir||T48524 lysophospholipase-like protein -
Arabidopsis thaliana gi|7573379|emb|CAB87683.1|
lysophospholipase-like protein [Arabidopsis thaliana]
Length = 390
Score = 132 bits (333), Expect = 2e-30
Identities = 63/76 (82%), Positives = 68/76 (88%)
Frame = -3
Query: 566 SSYLMRNFKSVTVPFFVLHGTADKVTDPLASQDLYNKAASEFKDIKLYDGFLHDLLFEPE 387
++YL RNFKSVTVPFFVLHGT DKVTDPLASQDLYN+A S FKDIKLYDGFLHDLLFEPE
Sbjct: 304 TAYLTRNFKSVTVPFFVLHGTEDKVTDPLASQDLYNQAPSVFKDIKLYDGFLHDLLFEPE 363
Query: 386 REEIALDIINWMEKRL 339
REE+ DII+WM RL
Sbjct: 364 REEVGRDIIDWMMNRL 379
>gb|AAM62693.1| lysophospholipase-like protein [Arabidopsis thaliana]
Length = 383
Score = 132 bits (333), Expect = 2e-30
Identities = 63/76 (82%), Positives = 68/76 (88%)
Frame = -3
Query: 566 SSYLMRNFKSVTVPFFVLHGTADKVTDPLASQDLYNKAASEFKDIKLYDGFLHDLLFEPE 387
++YL RNFKSVTVPFFVLHGT DKVTDPLASQDLYN+A S FKDIKLYDGFLHDLLFEPE
Sbjct: 297 TAYLTRNFKSVTVPFFVLHGTEDKVTDPLASQDLYNQAPSVFKDIKLYDGFLHDLLFEPE 356
Query: 386 REEIALDIINWMEKRL 339
REE+ DII+WM RL
Sbjct: 357 REEVGRDIIDWMMNRL 372
>dbj|BAB89422.1| lysophospholipase - like [Oryza sativa (japonica cultivar-group)]
Length = 395
Score = 128 bits (321), Expect = 6e-29
Identities = 59/76 (77%), Positives = 68/76 (88%)
Frame = -3
Query: 566 SSYLMRNFKSVTVPFFVLHGTADKVTDPLASQDLYNKAASEFKDIKLYDGFLHDLLFEPE 387
SSYL+ N K VTVPF VLHGTAD+VTDPLASQDLYN+A+S KD++LYDGFLHDLLFEPE
Sbjct: 315 SSYLLHNLKKVTVPFMVLHGTADRVTDPLASQDLYNEASSRHKDLRLYDGFLHDLLFEPE 374
Query: 386 REEIALDIINWMEKRL 339
R+EIA DII+WME+ L
Sbjct: 375 RDEIATDIIDWMERML 390
>pir||T02661 lysophospholipase homolog - rice gi|2801536|gb|AAB97366.1|
lysophospholipase homolog [Oryza sativa]
Length = 304
Score = 113 bits (282), Expect = 2e-24
Identities = 54/76 (71%), Positives = 60/76 (78%)
Frame = -3
Query: 566 SSYLMRNFKSVTVPFFVLHGTADKVTDPLASQDLYNKAASEFKDIKLYDGFLHDLLFEPE 387
SSYL RN VTVPF VLHGTAD +TDP ASQ LY +AS K IKLYDG+LHDLLFEPE
Sbjct: 223 SSYLQRNLSRVTVPFLVLHGTADTITDPGASQRLYQSSASAHKSIKLYDGYLHDLLFEPE 282
Query: 386 REEIALDIINWMEKRL 339
R++IA DIINW+ RL
Sbjct: 283 RDDIANDIINWLSSRL 298
>pir||H86317 protein F15H18.13 [imported] - Arabidopsis thaliana
gi|6714289|gb|AAF25985.1|AC013354_4 F15H18.13
[Arabidopsis thaliana]
Length = 333
Score = 97.4 bits (241), Expect = 1e-19
Identities = 44/75 (58%), Positives = 58/75 (76%)
Frame = -3
Query: 563 SYLMRNFKSVTVPFFVLHGTADKVTDPLASQDLYNKAASEFKDIKLYDGFLHDLLFEPER 384
++L++N + VPF V+HGTAD VTDP +Q LYN+A+S K IKLYDG LHDLLFEPER
Sbjct: 259 AHLLQNLNRIKVPFLVMHGTADTVTDPKGTQKLYNEASSSDKSIKLYDGLLHDLLFEPER 318
Query: 383 EEIALDIINWMEKRL 339
E IA I++W+ +R+
Sbjct: 319 ETIAGVILDWLNRRV 333
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 436,125,106
Number of Sequences: 1393205
Number of extensions: 8876021
Number of successful extensions: 24852
Number of sequences better than 10.0: 143
Number of HSP's better than 10.0 without gapping: 24212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24825
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
