Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003615A_C01 KMC003615A_c01
(677 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_032862.1| per-hexamer repeat gene 5 [Mus musculus] gi|250... 57 2e-07
pir||UMMS period clock protein - mouse (fragment) gi|1334150|emb... 57 2e-07
ref|NP_188267.1| putative lectin; protein id: At3g16460.1 [Arabi... 57 2e-07
gb|AAA77676.1| period protein 55 7e-07
dbj|BAA00007.1| proteoglycan [Drosophila melanogaster] 55 9e-07
>ref|NP_032862.1| per-hexamer repeat gene 5 [Mus musculus]
gi|2507093|sp|P08399|PHX5_MOUSE Per-hexamer repeat
protein 5 gi|1196649|gb|AAA88320.1| ORF starts at 87,
first start codon is found at 210.; putative
Length = 672
Score = 57.4 bits (137), Expect = 2e-07
Identities = 35/76 (46%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = -3
Query: 666 TGTTPGT---TTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGT 496
TGT GT T GTGTGTGTGTGT + T TG+ T S G G GTG G SG GT
Sbjct: 291 TGTGTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGSGSGTGTGTGTGSG-SGTGT 349
Query: 495 NSDDSHGGLRLADTTS 448
+ G ++ T +
Sbjct: 350 GTGSGSGTAKVTGTAT 365
Score = 54.7 bits (130), Expect = 1e-06
Identities = 32/65 (49%), Positives = 39/65 (59%), Gaps = 1/65 (1%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP-SGVGTNS 490
+GT GT T GTGTGTGTGTGT + T G+ T ++ G G GTG G +G GT +
Sbjct: 599 SGTGTGTGT---GTGTGTGTGTGTSTVTVRGTGTGTATATGTGTGTGTGTGTGTGTGTGT 655
Query: 489 DDSHG 475
D S G
Sbjct: 656 DTSTG 660
Score = 53.9 bits (128), Expect = 2e-06
Identities = 33/64 (51%), Positives = 36/64 (55%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNSD 487
TGT GT T GTGTGTGTGTGT T TG+ T + G G GTG G +G GT S
Sbjct: 277 TGTGTGTGT---GTGTGTGTGTGTAKVTGTGTGTGTGTGTGTGTGTGTGTG-TGTGTGSG 332
Query: 486 DSHG 475
G
Sbjct: 333 SGTG 336
Score = 53.9 bits (128), Expect = 2e-06
Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = -3
Query: 666 TGTTPGTTTPSM---GTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP-SGVG 499
TGT GT T + GTGTGTGTGTGT + T TG+ T + G G GTG G +G G
Sbjct: 229 TGTDTGTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTAKVTGTGTDRGTGTGTGTGTGTG 288
Query: 498 TNSDDSHGGLRLADT 454
T + G ++ T
Sbjct: 289 TGTGTGTGTAKVTGT 303
Score = 52.4 bits (124), Expect = 6e-06
Identities = 34/76 (44%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = -3
Query: 666 TGTTPGTTTPS-MGTGTGTGTGTGTPSST----TTGSTTPFSSTPGVLGGIGTGMGPSGV 502
TGT GT T + GTGTGTGTGTGT T TG+ T + G G GTG G +G
Sbjct: 169 TGTDRGTGTGTGTGTGTGTGTGTGTAKVTGTAKVTGTGTGTAKVTGTGTGTGTGTG-TGT 227
Query: 501 GTNSDDSHGGLRLADT 454
GT +D G ++ T
Sbjct: 228 GTGTDTGTGTAKVTGT 243
Score = 52.0 bits (123), Expect = 7e-06
Identities = 32/60 (53%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = -3
Query: 666 TGTTPGT---TTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGT 496
TGT GT T GTGTGTGTGTGT + T TG+ T + G G GTG G SG GT
Sbjct: 413 TGTDTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG-SGSGT 471
Score = 51.2 bits (121), Expect = 1e-05
Identities = 35/79 (44%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Frame = -3
Query: 666 TGTTPGT-----TTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMG---P 511
TGT GT T GTGTGTGTGTGT + T TGS + S G G GTG G
Sbjct: 475 TGTDTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTGSGSGSGSGSGSGSGTGTGTGLGSG 534
Query: 510 SGVGTNSDDSHGGLRLADT 454
SG GT G ++ T
Sbjct: 535 SGSGTAKVTGTGTAKVTGT 553
Score = 51.2 bits (121), Expect = 1e-05
Identities = 32/72 (44%), Positives = 39/72 (53%), Gaps = 1/72 (1%)
Frame = -3
Query: 666 TGTTPGTT-TPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNS 490
TGT GT GTGTGTGTGTGT + T TG+ T + G G GTG G +G GT +
Sbjct: 203 TGTGTGTAKVTGTGTGTGTGTGTGTGTGTDTGTGT--AKVTGTGTGTGTGTG-TGTGTGT 259
Query: 489 DDSHGGLRLADT 454
G ++ T
Sbjct: 260 GTGTGTAKVTGT 271
Score = 51.2 bits (121), Expect = 1e-05
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = -3
Query: 666 TGTTPGTTTPS-MGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP-----SG 505
TGT GT T S GTGTGTGTG+G+ + T TGS + + G G GTG +G
Sbjct: 321 TGTGTGTGTGSGSGTGTGTGTGSGSGTGTGTGSGSGTAKVTGTATGTGTGTDTGTGTGTG 380
Query: 504 VGTNSDDSHGGLRLADTTSLFLT 436
GT + G ++ T + T
Sbjct: 381 TGTGTGSGSGTAKVTGTATTTAT 403
Score = 51.2 bits (121), Expect = 1e-05
Identities = 30/57 (52%), Positives = 36/57 (62%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGT 496
TGT GT T + GTGTGTGTGTGT ++ TG+ T + G G GTG G +G GT
Sbjct: 139 TGTGTGTGTGT-GTGTGTGTGTGTGTAKVTGTGTDRGTGTGTGTGTGTGTG-TGTGT 193
Score = 50.8 bits (120), Expect = 2e-05
Identities = 32/69 (46%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = -3
Query: 666 TGTTPGT-----TTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGV 502
TGT GT T GTGTGTGTGTGT + T TG+ T + G G GTG G +G
Sbjct: 259 TGTGTGTAKVTGTGTDRGTGTGTGTGTGTGTGTGTGTGTAKVTGTGTGTGTGTGTG-TGT 317
Query: 501 GTNSDDSHG 475
GT + G
Sbjct: 318 GTGTGTGTG 326
Score = 50.4 bits (119), Expect = 2e-05
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = -3
Query: 666 TGTTPGT-----TTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP-SG 505
TGT GT T GTGTGTGTGTGT + T TG+ T + G GTG G +G
Sbjct: 123 TGTGTGTAKVTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTAKVTGTGTDRGTGTGTGTG 182
Query: 504 VGTNSDDSHGGLRLADTTSL 445
GT + G ++ T +
Sbjct: 183 TGTGTGTGTGTAKVTGTAKV 202
Score = 50.4 bits (119), Expect = 2e-05
Identities = 32/65 (49%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGV-GTNS 490
TGT GT T + GTGTGT TGTGT T TG+ T + G G GTG G + V GT +
Sbjct: 215 TGTGTGTGTGT-GTGTGTDTGTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTAKVTGTGT 273
Query: 489 DDSHG 475
D G
Sbjct: 274 DRGTG 278
Score = 48.5 bits (114), Expect = 8e-05
Identities = 31/67 (46%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP---SGVGT 496
TGT GT T + GTGTGTGTGTGT + T TG+ T S G GT G +G GT
Sbjct: 431 TGTGTGTGTGT-GTGTGTGTGTGTGTGTGTGTGTGTGSGSGTAKVTGTDTGTAKVTGTGT 489
Query: 495 NSDDSHG 475
+ G
Sbjct: 490 GTGTGTG 496
Score = 46.6 bits (109), Expect = 3e-04
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -3
Query: 666 TGTTPGTTTPSM-GTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMG-PSGVGTN 493
T GT T + GTGTGTGTGTG+ S + +GS + S G G GTG G SG G+
Sbjct: 539 TAKVTGTGTAKVTGTGTGTGTGTGSGSGSGSGSGSGSGSGSGSGSGTGTGTGLGSGSGSG 598
Query: 492 SDDSHG 475
S G
Sbjct: 599 SGTGTG 604
Score = 46.2 bits (108), Expect = 4e-04
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 7/58 (12%)
Frame = -3
Query: 666 TGTTPGTTTPSM-GTGTGT------GTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMG 514
TGT GT+T ++ GTGTGT GTGTGT + T TG+ T ++ G G GTG G
Sbjct: 613 TGTGTGTSTVTVRGTGTGTATATGTGTGTGTGTGTGTGTGTGTDTSTGTDRGTGTGTG 670
Score = 46.2 bits (108), Expect = 4e-04
Identities = 29/64 (45%), Positives = 36/64 (55%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNSD 487
TGT GT T + GTGTGTG+G+GT T T + T + G G GTG G +G GT +
Sbjct: 449 TGTGTGTGTGT-GTGTGTGSGSGTAKVTGTDTGTAKVTGTGTGTGTGTGTG-TGTGTGTG 506
Query: 486 DSHG 475
G
Sbjct: 507 TGTG 510
Score = 45.1 bits (105), Expect = 0.001
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP-SGVGTNS 490
TGT T T + GT TGTGTGT + T TG+ T + G G GTG G +G GT +
Sbjct: 407 TGTAKVTGTDT-GTAKVTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 465
Query: 489 DDSHGGLRLADT 454
G ++ T
Sbjct: 466 GSGSGTAKVTGT 477
Score = 43.9 bits (102), Expect = 0.002
Identities = 34/83 (40%), Positives = 40/83 (47%), Gaps = 19/83 (22%)
Frame = -3
Query: 666 TGTTPGTTTPS-MGTGTGTGTGTGTPS---------STTTGSTTPFSSTPGVLG------ 535
TGT GT T + GTGTGTGTGTGT S + TT +T + T V G
Sbjct: 361 TGTATGTGTGTDTGTGTGTGTGTGTGSGSGTAKVTGTATTTATVTETGTAKVTGTDTGTA 420
Query: 534 ---GIGTGMGPSGVGTNSDDSHG 475
G GTG G +G GT + G
Sbjct: 421 KVTGTGTGTG-TGTGTGTGTGTG 442
Score = 43.5 bits (101), Expect = 0.003
Identities = 31/73 (42%), Positives = 36/73 (48%), Gaps = 9/73 (12%)
Frame = -3
Query: 666 TGTTPGT-----TTPSMGTGTGT----GTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMG 514
TGT GT T GTGTGT GTGTGT + T TG+ T + G GTG G
Sbjct: 187 TGTGTGTAKVTGTAKVTGTGTGTAKVTGTGTGTGTGTGTGTGTGTDTGTGTAKVTGTGTG 246
Query: 513 PSGVGTNSDDSHG 475
+G GT + G
Sbjct: 247 -TGTGTGTGTGTG 258
Score = 43.1 bits (100), Expect = 0.003
Identities = 30/66 (45%), Positives = 33/66 (49%), Gaps = 2/66 (3%)
Frame = -3
Query: 666 TGTTPGTTTPS-MGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP-SGVGTN 493
TGT GT T S GT TGT TGT T TG+ T + G G GTG G SG G+
Sbjct: 457 TGTGTGTGTGSGSGTAKVTGTDTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTGSGSGSG 516
Query: 492 SDDSHG 475
S G
Sbjct: 517 SGSGSG 522
Score = 42.7 bits (99), Expect = 0.005
Identities = 30/75 (40%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Frame = -3
Query: 666 TGTTPGTTTPS-----------MGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTG 520
TGT GT T S GTGTGTG G+G+ S T + T + G G GTG
Sbjct: 501 TGTGTGTGTGSGSGSGSGSGSGSGTGTGTGLGSGSGSGTAKVTGTGTAKVTGTGTGTGTG 560
Query: 519 MGPSGVGTNSDDSHG 475
G SG G+ S G
Sbjct: 561 TG-SGSGSGSGSGSG 574
Score = 42.4 bits (98), Expect = 0.006
Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = -3
Query: 666 TGTTPGTTTPSM-GTGTGT----GTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP-SG 505
TGT G+ T + GT TGT GTGTGT + T TG+ T + G G G+G G SG
Sbjct: 463 TGTGSGSGTAKVTGTDTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTGSGSGSGSGSGSG 522
Query: 504 VGTNSDDSHG 475
GT + G
Sbjct: 523 SGTGTGTGLG 532
Score = 42.0 bits (97), Expect = 0.008
Identities = 31/84 (36%), Positives = 38/84 (44%), Gaps = 20/84 (23%)
Frame = -3
Query: 666 TGTTPGTTTPS---------------MGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGG 532
TGT GT T S G+G+GTGTGTG S + +GS T + G G
Sbjct: 553 TGTGTGTGTGSGSGSGSGSGSGSGSGSGSGSGTGTGTGLGSGSGSGSGTGTGTGTGTGTG 612
Query: 531 IGTGMGPS-----GVGTNSDDSHG 475
GTG G S G GT + + G
Sbjct: 613 TGTGTGTSTVTVRGTGTGTATATG 636
Score = 41.2 bits (95), Expect = 0.013
Identities = 27/64 (42%), Positives = 32/64 (49%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNSD 487
T TT T T + GT TGT TGT T TG+ T + G G GTG G +G GT +
Sbjct: 397 TATTTATVTET-GTAKVTGTDTGTAKVTGTGTGTGTGTGTGTGTGTGTGTG-TGTGTGTG 454
Query: 486 DSHG 475
G
Sbjct: 455 TGTG 458
Score = 40.0 bits (92), Expect = 0.029
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNSD 487
+G+ GT T GTG G+G+G+GT T TG+ + G G G+G G SG G+ S
Sbjct: 519 SGSGSGTGT---GTGLGSGSGSGTAKVTGTGTAKVTGTGTGTGTGTGSGSG-SGSGSGSG 574
Query: 486 DSHG 475
G
Sbjct: 575 SGSG 578
Score = 38.9 bits (89), Expect = 0.065
Identities = 27/68 (39%), Positives = 37/68 (53%), Gaps = 4/68 (5%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTG----TGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVG 499
+G+ GT T +G+G+G+G TGTGT T TG+ T + G G G+G G SG G
Sbjct: 521 SGSGTGTGT-GLGSGSGSGTAKVTGTGTAKVTGTGTGTGTGTGSGSGSGSGSGSG-SGSG 578
Query: 498 TNSDDSHG 475
+ S G
Sbjct: 579 SGSGSGTG 586
Score = 38.9 bits (89), Expect = 0.065
Identities = 27/72 (37%), Positives = 36/72 (49%), Gaps = 1/72 (1%)
Frame = -3
Query: 666 TGTTPGTTTPS-MGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNS 490
TGT GT T + GT T TGTGT ++ TG+ + G G GTG G +G GT +
Sbjct: 103 TGTGTGTATVTETGTAKVTDTGTGTGTAKVTGT----AKVTGTGTGTGTGTG-TGTGTGT 157
Query: 489 DDSHGGLRLADT 454
G ++ T
Sbjct: 158 GTGTGTAKVTGT 169
Score = 37.7 bits (86), Expect = 0.15
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = -3
Query: 666 TGTTPGTTTPSM-----GTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGV 502
TGT T + GTGT T T TGT T TG+ T + G GTG G +G
Sbjct: 89 TGTVTARATVTARVTGTGTGTATVTETGTAKVTDTGTGTGTAKVTGTAKVTGTGTG-TGT 147
Query: 501 GTNSDDSHG 475
GT + G
Sbjct: 148 GTGTGTGTG 156
Score = 37.7 bits (86), Expect = 0.15
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -3
Query: 675 AVSTGTTPGTTTPS-MGTGTGTGTGTGTPSSTTTGSTT 565
A TGT GT T + GTGTGT T TGT T TG+ T
Sbjct: 634 ATGTGTGTGTGTGTGTGTGTGTDTSTGTDRGTGTGTGT 671
Score = 36.6 bits (83), Expect = 0.32
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = -3
Query: 669 STGTTPGTTTPSMGTGTGTG----TGTGTPSSTTTGSTTPFSSTPGVLGGIGTG 520
+TGT G T GT TGTG TG GT + T TG+ T ++ + G GTG
Sbjct: 58 TTGTATGIAT---GTCTGTGRVKATGRGTGTDTDTGTVTARATVTARVTGTGTG 108
>pir||UMMS period clock protein - mouse (fragment) gi|1334150|emb|CAA26710.1|
unidentified reading frame (first ATG at pos. 210) [Mus
musculus] gi|224719|prf||1111288A gene cp2.2
Length = 713
Score = 57.4 bits (137), Expect = 2e-07
Identities = 35/76 (46%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = -3
Query: 666 TGTTPGT---TTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGT 496
TGT GT T GTGTGTGTGTGT + T TG+ T S G G GTG G SG GT
Sbjct: 332 TGTGTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGSGSGTGTGTGTGSG-SGTGT 390
Query: 495 NSDDSHGGLRLADTTS 448
+ G ++ T +
Sbjct: 391 GTGSGSGTAKVTGTAT 406
Score = 54.7 bits (130), Expect = 1e-06
Identities = 32/65 (49%), Positives = 39/65 (59%), Gaps = 1/65 (1%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP-SGVGTNS 490
+GT GT T GTGTGTGTGTGT + T G+ T ++ G G GTG G +G GT +
Sbjct: 640 SGTGTGTGT---GTGTGTGTGTGTSTVTVRGTGTGTATATGTGTGTGTGTGTGTGTGTGT 696
Query: 489 DDSHG 475
D S G
Sbjct: 697 DTSTG 701
Score = 53.9 bits (128), Expect = 2e-06
Identities = 33/64 (51%), Positives = 36/64 (55%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNSD 487
TGT GT T GTGTGTGTGTGT T TG+ T + G G GTG G +G GT S
Sbjct: 318 TGTGTGTGT---GTGTGTGTGTGTAKVTGTGTGTGTGTGTGTGTGTGTGTG-TGTGTGSG 373
Query: 486 DSHG 475
G
Sbjct: 374 SGTG 377
Score = 53.9 bits (128), Expect = 2e-06
Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = -3
Query: 666 TGTTPGTTTPSM---GTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP-SGVG 499
TGT GT T + GTGTGTGTGTGT + T TG+ T + G G GTG G +G G
Sbjct: 270 TGTDTGTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTAKVTGTGTDRGTGTGTGTGTGTG 329
Query: 498 TNSDDSHGGLRLADT 454
T + G ++ T
Sbjct: 330 TGTGTGTGTAKVTGT 344
Score = 52.4 bits (124), Expect = 6e-06
Identities = 34/76 (44%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = -3
Query: 666 TGTTPGTTTPS-MGTGTGTGTGTGTPSST----TTGSTTPFSSTPGVLGGIGTGMGPSGV 502
TGT GT T + GTGTGTGTGTGT T TG+ T + G G GTG G +G
Sbjct: 210 TGTDRGTGTGTGTGTGTGTGTGTGTAKVTGTAKVTGTGTGTAKVTGTGTGTGTGTG-TGT 268
Query: 501 GTNSDDSHGGLRLADT 454
GT +D G ++ T
Sbjct: 269 GTGTDTGTGTAKVTGT 284
Score = 52.0 bits (123), Expect = 7e-06
Identities = 32/60 (53%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = -3
Query: 666 TGTTPGT---TTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGT 496
TGT GT T GTGTGTGTGTGT + T TG+ T + G G GTG G SG GT
Sbjct: 454 TGTDTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG-SGSGT 512
Score = 51.2 bits (121), Expect = 1e-05
Identities = 35/79 (44%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Frame = -3
Query: 666 TGTTPGT-----TTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMG---P 511
TGT GT T GTGTGTGTGTGT + T TGS + S G G GTG G
Sbjct: 516 TGTDTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTGSGSGSGSGSGSGSGTGTGTGLGSG 575
Query: 510 SGVGTNSDDSHGGLRLADT 454
SG GT G ++ T
Sbjct: 576 SGSGTAKVTGTGTAKVTGT 594
Score = 51.2 bits (121), Expect = 1e-05
Identities = 32/72 (44%), Positives = 39/72 (53%), Gaps = 1/72 (1%)
Frame = -3
Query: 666 TGTTPGTT-TPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNS 490
TGT GT GTGTGTGTGTGT + T TG+ T + G G GTG G +G GT +
Sbjct: 244 TGTGTGTAKVTGTGTGTGTGTGTGTGTGTDTGTGT--AKVTGTGTGTGTGTG-TGTGTGT 300
Query: 489 DDSHGGLRLADT 454
G ++ T
Sbjct: 301 GTGTGTAKVTGT 312
Score = 51.2 bits (121), Expect = 1e-05
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = -3
Query: 666 TGTTPGTTTPS-MGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP-----SG 505
TGT GT T S GTGTGTGTG+G+ + T TGS + + G G GTG +G
Sbjct: 362 TGTGTGTGTGSGSGTGTGTGTGSGSGTGTGTGSGSGTAKVTGTATGTGTGTDTGTGTGTG 421
Query: 504 VGTNSDDSHGGLRLADTTSLFLT 436
GT + G ++ T + T
Sbjct: 422 TGTGTGSGSGTAKVTGTATTTAT 444
Score = 51.2 bits (121), Expect = 1e-05
Identities = 30/57 (52%), Positives = 36/57 (62%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGT 496
TGT GT T + GTGTGTGTGTGT ++ TG+ T + G G GTG G +G GT
Sbjct: 180 TGTGTGTGTGT-GTGTGTGTGTGTGTAKVTGTGTDRGTGTGTGTGTGTGTG-TGTGT 234
Score = 50.8 bits (120), Expect = 2e-05
Identities = 32/69 (46%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = -3
Query: 666 TGTTPGT-----TTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGV 502
TGT GT T GTGTGTGTGTGT + T TG+ T + G G GTG G +G
Sbjct: 300 TGTGTGTAKVTGTGTDRGTGTGTGTGTGTGTGTGTGTGTAKVTGTGTGTGTGTGTG-TGT 358
Query: 501 GTNSDDSHG 475
GT + G
Sbjct: 359 GTGTGTGTG 367
Score = 50.4 bits (119), Expect = 2e-05
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = -3
Query: 666 TGTTPGT-----TTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP-SG 505
TGT GT T GTGTGTGTGTGT + T TG+ T + G GTG G +G
Sbjct: 164 TGTGTGTAKVTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTAKVTGTGTDRGTGTGTGTG 223
Query: 504 VGTNSDDSHGGLRLADTTSL 445
GT + G ++ T +
Sbjct: 224 TGTGTGTGTGTAKVTGTAKV 243
Score = 50.4 bits (119), Expect = 2e-05
Identities = 32/65 (49%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGV-GTNS 490
TGT GT T + GTGTGT TGTGT T TG+ T + G G GTG G + V GT +
Sbjct: 256 TGTGTGTGTGT-GTGTGTDTGTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTAKVTGTGT 314
Query: 489 DDSHG 475
D G
Sbjct: 315 DRGTG 319
Score = 48.5 bits (114), Expect = 8e-05
Identities = 31/67 (46%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP---SGVGT 496
TGT GT T + GTGTGTGTGTGT + T TG+ T S G GT G +G GT
Sbjct: 472 TGTGTGTGTGT-GTGTGTGTGTGTGTGTGTGTGTGTGSGSGTAKVTGTDTGTAKVTGTGT 530
Query: 495 NSDDSHG 475
+ G
Sbjct: 531 GTGTGTG 537
Score = 46.6 bits (109), Expect = 3e-04
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = -3
Query: 666 TGTTPGTTTPSM-GTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMG-PSGVGTN 493
T GT T + GTGTGTGTGTG+ S + +GS + S G G GTG G SG G+
Sbjct: 580 TAKVTGTGTAKVTGTGTGTGTGTGSGSGSGSGSGSGSGSGSGSGSGTGTGTGLGSGSGSG 639
Query: 492 SDDSHG 475
S G
Sbjct: 640 SGTGTG 645
Score = 46.2 bits (108), Expect = 4e-04
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 7/58 (12%)
Frame = -3
Query: 666 TGTTPGTTTPSM-GTGTGT------GTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMG 514
TGT GT+T ++ GTGTGT GTGTGT + T TG+ T ++ G G GTG G
Sbjct: 654 TGTGTGTSTVTVRGTGTGTATATGTGTGTGTGTGTGTGTGTGTDTSTGTDRGTGTGTG 711
Score = 46.2 bits (108), Expect = 4e-04
Identities = 29/64 (45%), Positives = 36/64 (55%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNSD 487
TGT GT T + GTGTGTG+G+GT T T + T + G G GTG G +G GT +
Sbjct: 490 TGTGTGTGTGT-GTGTGTGSGSGTAKVTGTDTGTAKVTGTGTGTGTGTGTG-TGTGTGTG 547
Query: 486 DSHG 475
G
Sbjct: 548 TGTG 551
Score = 45.1 bits (105), Expect = 0.001
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP-SGVGTNS 490
TGT T T + GT TGTGTGT + T TG+ T + G G GTG G +G GT +
Sbjct: 448 TGTAKVTGTDT-GTAKVTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 506
Query: 489 DDSHGGLRLADT 454
G ++ T
Sbjct: 507 GSGSGTAKVTGT 518
Score = 43.9 bits (102), Expect = 0.002
Identities = 34/83 (40%), Positives = 40/83 (47%), Gaps = 19/83 (22%)
Frame = -3
Query: 666 TGTTPGTTTPS-MGTGTGTGTGTGTPS---------STTTGSTTPFSSTPGVLG------ 535
TGT GT T + GTGTGTGTGTGT S + TT +T + T V G
Sbjct: 402 TGTATGTGTGTDTGTGTGTGTGTGTGSGSGTAKVTGTATTTATVTETGTAKVTGTDTGTA 461
Query: 534 ---GIGTGMGPSGVGTNSDDSHG 475
G GTG G +G GT + G
Sbjct: 462 KVTGTGTGTG-TGTGTGTGTGTG 483
Score = 43.5 bits (101), Expect = 0.003
Identities = 31/73 (42%), Positives = 36/73 (48%), Gaps = 9/73 (12%)
Frame = -3
Query: 666 TGTTPGT-----TTPSMGTGTGT----GTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMG 514
TGT GT T GTGTGT GTGTGT + T TG+ T + G GTG G
Sbjct: 228 TGTGTGTAKVTGTAKVTGTGTGTAKVTGTGTGTGTGTGTGTGTGTDTGTGTAKVTGTGTG 287
Query: 513 PSGVGTNSDDSHG 475
+G GT + G
Sbjct: 288 -TGTGTGTGTGTG 299
Score = 43.1 bits (100), Expect = 0.003
Identities = 30/66 (45%), Positives = 33/66 (49%), Gaps = 2/66 (3%)
Frame = -3
Query: 666 TGTTPGTTTPS-MGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP-SGVGTN 493
TGT GT T S GT TGT TGT T TG+ T + G G GTG G SG G+
Sbjct: 498 TGTGTGTGTGSGSGTAKVTGTDTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTGSGSGSG 557
Query: 492 SDDSHG 475
S G
Sbjct: 558 SGSGSG 563
Score = 42.7 bits (99), Expect = 0.005
Identities = 30/75 (40%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Frame = -3
Query: 666 TGTTPGTTTPS-----------MGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTG 520
TGT GT T S GTGTGTG G+G+ S T + T + G G GTG
Sbjct: 542 TGTGTGTGTGSGSGSGSGSGSGSGTGTGTGLGSGSGSGTAKVTGTGTAKVTGTGTGTGTG 601
Query: 519 MGPSGVGTNSDDSHG 475
G SG G+ S G
Sbjct: 602 TG-SGSGSGSGSGSG 615
Score = 42.4 bits (98), Expect = 0.006
Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Frame = -3
Query: 666 TGTTPGTTTPSM-GTGTGT----GTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP-SG 505
TGT G+ T + GT TGT GTGTGT + T TG+ T + G G G+G G SG
Sbjct: 504 TGTGSGSGTAKVTGTDTGTAKVTGTGTGTGTGTGTGTGTGTGTGTGTGSGSGSGSGSGSG 563
Query: 504 VGTNSDDSHG 475
GT + G
Sbjct: 564 SGTGTGTGLG 573
Score = 42.0 bits (97), Expect = 0.008
Identities = 31/84 (36%), Positives = 38/84 (44%), Gaps = 20/84 (23%)
Frame = -3
Query: 666 TGTTPGTTTPS---------------MGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGG 532
TGT GT T S G+G+GTGTGTG S + +GS T + G G
Sbjct: 594 TGTGTGTGTGSGSGSGSGSGSGSGSGSGSGSGTGTGTGLGSGSGSGSGTGTGTGTGTGTG 653
Query: 531 IGTGMGPS-----GVGTNSDDSHG 475
GTG G S G GT + + G
Sbjct: 654 TGTGTGTSTVTVRGTGTGTATATG 677
Score = 41.2 bits (95), Expect = 0.013
Identities = 27/64 (42%), Positives = 32/64 (49%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNSD 487
T TT T T + GT TGT TGT T TG+ T + G G GTG G +G GT +
Sbjct: 438 TATTTATVTET-GTAKVTGTDTGTAKVTGTGTGTGTGTGTGTGTGTGTGTG-TGTGTGTG 495
Query: 486 DSHG 475
G
Sbjct: 496 TGTG 499
Score = 40.0 bits (92), Expect = 0.029
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNSD 487
+G+ GT T GTG G+G+G+GT T TG+ + G G G+G G SG G+ S
Sbjct: 560 SGSGSGTGT---GTGLGSGSGSGTAKVTGTGTAKVTGTGTGTGTGTGSGSG-SGSGSGSG 615
Query: 486 DSHG 475
G
Sbjct: 616 SGSG 619
Score = 38.9 bits (89), Expect = 0.065
Identities = 27/68 (39%), Positives = 37/68 (53%), Gaps = 4/68 (5%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTG----TGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVG 499
+G+ GT T +G+G+G+G TGTGT T TG+ T + G G G+G G SG G
Sbjct: 562 SGSGTGTGT-GLGSGSGSGTAKVTGTGTAKVTGTGTGTGTGTGSGSGSGSGSGSG-SGSG 619
Query: 498 TNSDDSHG 475
+ S G
Sbjct: 620 SGSGSGTG 627
Score = 38.9 bits (89), Expect = 0.065
Identities = 27/72 (37%), Positives = 36/72 (49%), Gaps = 1/72 (1%)
Frame = -3
Query: 666 TGTTPGTTTPS-MGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNS 490
TGT GT T + GT T TGTGT ++ TG+ + G G GTG G +G GT +
Sbjct: 144 TGTGTGTATVTETGTAKVTDTGTGTGTAKVTGT----AKVTGTGTGTGTGTG-TGTGTGT 198
Query: 489 DDSHGGLRLADT 454
G ++ T
Sbjct: 199 GTGTGTAKVTGT 210
Score = 37.7 bits (86), Expect = 0.15
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = -3
Query: 666 TGTTPGTTTPSM-----GTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGV 502
TGT T + GTGT T T TGT T TG+ T + G GTG G +G
Sbjct: 130 TGTVTARATVTARVTGTGTGTATVTETGTAKVTDTGTGTGTAKVTGTAKVTGTGTG-TGT 188
Query: 501 GTNSDDSHG 475
GT + G
Sbjct: 189 GTGTGTGTG 197
Score = 37.7 bits (86), Expect = 0.15
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -3
Query: 675 AVSTGTTPGTTTPS-MGTGTGTGTGTGTPSSTTTGSTT 565
A TGT GT T + GTGTGT T TGT T TG+ T
Sbjct: 675 ATGTGTGTGTGTGTGTGTGTGTDTSTGTDRGTGTGTGT 712
Score = 36.6 bits (83), Expect = 0.32
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = -3
Query: 669 STGTTPGTTTPSMGTGTGTG----TGTGTPSSTTTGSTTPFSSTPGVLGGIGTG 520
+TGT G T GT TGTG TG GT + T TG+ T ++ + G GTG
Sbjct: 99 TTGTATGIAT---GTCTGTGRVKATGRGTGTDTDTGTVTARATVTARVTGTGTG 149
>ref|NP_188267.1| putative lectin; protein id: At3g16460.1 [Arabidopsis thaliana]
gi|22330081|ref|NP_683404.1| similar to putative lectin;
protein id: At1g45258.1, supported by cDNA: gi_14334869
[Arabidopsis thaliana] gi|2062157|gb|AAB63631.1|
jasmonate inducible protein isolog [Arabidopsis
thaliana] gi|9279645|dbj|BAB01145.1| jasmonate inducible
protein; myrosinase binding protein-like [Arabidopsis
thaliana] gi|14334870|gb|AAK59613.1| putative lectin
protein [Arabidopsis thaliana]
gi|24030509|gb|AAN41400.1| putative lectin protein
[Arabidopsis thaliana]
Length = 705
Score = 57.0 bits (136), Expect = 2e-07
Identities = 32/64 (50%), Positives = 37/64 (57%)
Frame = -3
Query: 663 GTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNSDD 484
GT GT T GTGTGTGTGTGT + T TG+ T + T GG GTG +G GT +
Sbjct: 179 GTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGGTGTG---TGTGTGTGT 235
Query: 483 SHGG 472
GG
Sbjct: 236 GTGG 239
Score = 56.6 bits (135), Expect = 3e-07
Identities = 32/64 (50%), Positives = 36/64 (56%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNSD 487
TGT GT T GTGTGTGTGTGT + T TG+ + T GG GTG G G GT +
Sbjct: 138 TGTGTGTGT---GTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGGTGTGTGTGGTGTGTG 194
Query: 486 DSHG 475
G
Sbjct: 195 TGTG 198
Score = 56.6 bits (135), Expect = 3e-07
Identities = 33/74 (44%), Positives = 38/74 (50%), Gaps = 6/74 (8%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSST------PGVLGGIGTGMGPSG 505
TGT G T GTGTGTGTGTGT + T TG T + T G G GTG G +G
Sbjct: 182 TGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGGTGTGTGTGTGTGTGTGGTG 241
Query: 504 VGTNSDDSHGGLRL 463
GT + G +L
Sbjct: 242 TGTGTGTGSGAQKL 255
Score = 55.5 bits (132), Expect = 7e-07
Identities = 31/63 (49%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = -3
Query: 657 TPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLG-GIGTGMGPSGVGTNSDDS 481
T GT T GTGTGTGTGTGT + T TG+ T + G G G GTG G +G GT + +
Sbjct: 130 TGGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGGTGTGTGTGGT 189
Query: 480 HGG 472
G
Sbjct: 190 GTG 192
Score = 52.8 bits (125), Expect = 4e-06
Identities = 33/75 (44%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGT----------GTGTPSSTTTGSTTPFSSTPGV-LGGIGTG 520
TGT GT T GTGTGTGT GTGT + T TG+ T + G GG GTG
Sbjct: 158 TGTGTGTGTGGTGTGTGTGTGGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGGTGTG 217
Query: 519 MGPSGVGTNSDDSHG 475
G G GT + G
Sbjct: 218 TGTGGTGTGTGTGTG 232
Score = 52.4 bits (124), Expect = 6e-06
Identities = 32/63 (50%), Positives = 36/63 (56%), Gaps = 4/63 (6%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGT-GTPSSTTTGST---TPFSSTPGVLGGIGTGMGPSGVG 499
TGT GT T + GTGTGTGTGT GT + T TG T T + G G GTG G G G
Sbjct: 156 TGTGTGTGTGTGGTGTGTGTGTGGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGGTG 215
Query: 498 TNS 490
T +
Sbjct: 216 TGT 218
Score = 50.8 bits (120), Expect = 2e-05
Identities = 29/61 (47%), Positives = 34/61 (55%)
Frame = -3
Query: 654 PGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNSDDSHG 475
P T + GTGTGTGTGTGT + T TG+ T + G GG GTG G GT + G
Sbjct: 129 PTGGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT-GGTGTGTGTGTGGTGTGTGTG 187
Query: 474 G 472
G
Sbjct: 188 G 188
Score = 50.4 bits (119), Expect = 2e-05
Identities = 34/73 (46%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGT---PSSTTTGSTTPFSSTPGVLGGIGTGMGP----- 511
TGT GT T + GTGTGTGTGTGT + T TG+ T + T GG GTG G
Sbjct: 142 TGTGTGTGTGT-GTGTGTGTGTGTGTGGTGTGTGTGTGGTGTGTGTGGTGTGTGTGTGTG 200
Query: 510 SGVGTNSDDSHGG 472
+G GT + GG
Sbjct: 201 TGTGTGTGTGTGG 213
Score = 38.9 bits (89), Expect = 0.065
Identities = 18/34 (52%), Positives = 21/34 (60%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTT 565
TGT GT T GTGTGTGTG+G G++T
Sbjct: 229 TGTGTGTGTGGTGTGTGTGTGSGAQKLEAQGNST 262
>gb|AAA77676.1| period protein
Length = 97
Score = 55.5 bits (132), Expect = 7e-07
Identities = 36/68 (52%), Positives = 40/68 (57%), Gaps = 3/68 (4%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVGTNS- 490
TGT GT T GTGTGTGTGTGT + T TG+ T + G G GTG G +G GTNS
Sbjct: 29 TGTGTGTGT---GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG-TGNGTNSG 84
Query: 489 --DDSHGG 472
S GG
Sbjct: 85 TTSSSRGG 92
Score = 51.6 bits (122), Expect = 1e-05
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -3
Query: 675 AVSTGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP-SGVG 499
+V+ + GT GTGTGTGTGTGT + T TG+ T + G G GTG G +G G
Sbjct: 17 SVTNTSIAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 76
Query: 498 TNSDDSHG 475
T + + G
Sbjct: 77 TGNGTNSG 84
Score = 40.8 bits (94), Expect = 0.017
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = -3
Query: 666 TGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTP 547
TGT GT T + GTGTGTGTG GT S TT+ S ++ P
Sbjct: 59 TGTGTGTGTGT-GTGTGTGTGNGTNSGTTSSSRGGSAAVP 97
>dbj|BAA00007.1| proteoglycan [Drosophila melanogaster]
Length = 570
Score = 55.1 bits (131), Expect = 9e-07
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = -3
Query: 675 AVSTGTTPGTTTPSMGTGTGTGTGTGTPSSTTTGSTTPFSSTPGVLGGIGTGMGP-SGVG 499
+V+ + GT GTGTGTGTGTGT + T TG+ T + G G GTG G SG G
Sbjct: 188 SVTNTSIAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGNGTNSGTG 247
Query: 498 T-NSDDSHGGLRLADTT 451
T + S GG R+ T
Sbjct: 248 TGTASSSKGGRRIPPVT 264
Score = 32.3 bits (72), Expect = 6.1
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -3
Query: 675 AVSTGTTPGTTTPSMGTGTGTGTG-TGTPSSTTTGSTTPFSSTPGVLGGIGTGMGPSGVG 499
AV TG G+ + G G+GTG GTP T TT + TPG GG G + G
Sbjct: 352 AVGTGGV-GSGGAGVAGGGGSGTGVAGTPEGRAT--TTSGTGTPGGAGGGGGAGAAAAAG 408
Query: 498 TNS 490
+S
Sbjct: 409 ASS 411
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 627,124,887
Number of Sequences: 1393205
Number of extensions: 15898082
Number of successful extensions: 142140
Number of sequences better than 10.0: 1768
Number of HSP's better than 10.0 without gapping: 70782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115064
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29987172312
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
