Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003589A_C01 KMC003589A_c01
(713 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_179913.1| WRKY family transcription factor; protein id: A... 206 3e-52
dbj|BAB16432.1| WRKY transcription factor Nt-SubD48 [Nicotiana t... 204 8e-52
pir||S72445 DNA-binding protein WRKY3 - parsley gi|1432056|gb|AA... 196 3e-49
ref|NP_194155.1| WRKY family transcription factor; protein id: A... 191 1e-47
ref|NP_680752.1| WRKY family transcription factor; protein id: A... 181 7e-45
>ref|NP_179913.1| WRKY family transcription factor; protein id: At2g23320.1,
supported by cDNA: gi_13877862, supported by cDNA:
gi_17065603 [Arabidopsis thaliana]
gi|20978770|sp|O22176|WR15_ARATH Probable WRKY
transcription factor 15 (WRKY DNA-binding protein 15)
gi|7488099|pir||T00500 probable elicitor response
element-binding protein WRKY3 - Arabidopsis thaliana
gi|2642432|gb|AAB87100.1| putative WRKY-type DNA-binding
protein [Arabidopsis thaliana]
gi|13506743|gb|AAK28314.1|AF224704_1 WRKY DNA-binding
protein 15 [Arabidopsis thaliana]
gi|13877863|gb|AAK44009.1|AF370194_1 putative WRKY-type
DNA-binding protein [Arabidopsis thaliana]
gi|17065604|gb|AAL33782.1| putative WRKY-type
DNA-binding protein [Arabidopsis thaliana]
Length = 317
Score = 206 bits (523), Expect = 3e-52
Identities = 99/133 (74%), Positives = 115/133 (86%), Gaps = 7/133 (5%)
Frame = -2
Query: 697 SSSLKRKCSSETLGSGKCGS--SSGRCHCSQKSRKMRLKRVVRVPAISLKMADIPPDDYS 524
S S KRKC+SE L +GKC S SSGRCHCS+K RK++ +R++RVPAIS KM+D+PPDDYS
Sbjct: 186 SKSTKRKCNSENLLTGKCASASSSGRCHCSKK-RKIKQRRIIRVPAISAKMSDVPPDDYS 244
Query: 523 WRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDAAMLVVTYEGEHNHALSAAD- 347
WRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERA DD++ML+VTYEG+HNH+LSAAD
Sbjct: 245 WRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAADDSSMLIVTYEGDHNHSLSAADL 304
Query: 346 ----ATNLILESS 320
+LILESS
Sbjct: 305 AGAAVADLILESS 317
>dbj|BAB16432.1| WRKY transcription factor Nt-SubD48 [Nicotiana tabacum]
Length = 350
Score = 204 bits (520), Expect = 8e-52
Identities = 102/135 (75%), Positives = 113/135 (83%), Gaps = 4/135 (2%)
Frame = -2
Query: 712 KPPLSSSSLKRKCSSETLGSGKC---GSSSGRCHCSQKSRKMRLKRVVRVPAISLKMADI 542
+PPLS+SS KRKCSS + KC G SSGRCHC +K RK R+KRVVRVPAIS+KMADI
Sbjct: 217 RPPLSTSSFKRKCSSMDDTALKCNSAGGSSGRCHCPKK-RKSRVKRVVRVPAISMKMADI 275
Query: 541 PPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDAAMLVVTYEGEHNHA 362
PPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDD ML+VTYEGEHNH+
Sbjct: 276 PPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPTMLIVTYEGEHNHS 335
Query: 361 LSAADATNL-ILESS 320
S ++ +LESS
Sbjct: 336 HSITESPAAHVLESS 350
>pir||S72445 DNA-binding protein WRKY3 - parsley gi|1432056|gb|AAC49528.1| WRKY3
[Petroselinum crispum]
Length = 341
Score = 196 bits (498), Expect = 3e-49
Identities = 96/127 (75%), Positives = 110/127 (86%), Gaps = 3/127 (2%)
Frame = -2
Query: 694 SSLKRKCSSETLGSGKC-GSSSGRCHCSQKSRKMRLKRVVRVPAISLKMADIPPDDYSWR 518
SSLKRKCSS S KC GSSSGRCHC +K +K+R+K+VVR+PAIS+K +DIPPDD+SWR
Sbjct: 210 SSLKRKCSSMNDVSAKCSGSSSGRCHCPKK-KKLRVKKVVRMPAISMKTSDIPPDDFSWR 268
Query: 517 KYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDAAMLVVTYEGEHNHALSAADATN 338
KYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERA+DD ML+VTYEGEHNH+ S+ + TN
Sbjct: 269 KYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAVDDPTMLIVTYEGEHNHSQSSNENTN 328
Query: 337 L--ILES 323
ILES
Sbjct: 329 TSHILES 335
>ref|NP_194155.1| WRKY family transcription factor; protein id: At4g24240.1,
supported by cDNA: 112528., supported by cDNA:
gi_13507096, supported by cDNA: gi_20465410 [Arabidopsis
thaliana] gi|20978794|sp|Q9STX0|WRK7_ARATH Probable WRKY
transcription factor 7 (WRKY DNA-binding protein 7)
gi|7484933|pir||T09887 DNA-binding protein homolog
T22A6.70 - Arabidopsis thaliana
gi|5051766|emb|CAB45059.1| putative DNA-binding protein
[Arabidopsis thaliana] gi|7269274|emb|CAB79334.1|
putative DNA-binding protein [Arabidopsis thaliana]
gi|13507097|gb|AAK28440.1|AF272746_1 WRKY DNA-binding
protein 7 [Arabidopsis thaliana]
gi|18176041|gb|AAL59973.1| putative DNA-binding protein
[Arabidopsis thaliana] gi|20465411|gb|AAM20130.1|
putative DNA-binding protein [Arabidopsis thaliana]
gi|21536816|gb|AAM61148.1| putative DNA-binding protein
[Arabidopsis thaliana]
Length = 353
Score = 191 bits (484), Expect = 1e-47
Identities = 91/118 (77%), Positives = 102/118 (86%)
Frame = -2
Query: 712 KPPLSSSSLKRKCSSETLGSGKCGSSSGRCHCSQKSRKMRLKRVVRVPAISLKMADIPPD 533
KPPLSS+SLKR+C+S S S RCHCS+K RK R+KRV+RVPA+S KMADIP D
Sbjct: 233 KPPLSSASLKRRCNS---------SPSSRCHCSKK-RKSRVKRVIRVPAVSSKMADIPSD 282
Query: 532 DYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDAAMLVVTYEGEHNHAL 359
++SWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDA ML+VTYEG+HNHAL
Sbjct: 283 EFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDAMMLIVTYEGDHNHAL 340
>ref|NP_680752.1| WRKY family transcription factor; protein id: At4g31550.1,
supported by cDNA: 11953., supported by cDNA:
gi_16604572 [Arabidopsis thaliana]
gi|23297314|gb|AAN12939.1| putative DNA-binding protein
[Arabidopsis thaliana]
Length = 325
Score = 181 bits (460), Expect = 7e-45
Identities = 86/124 (69%), Positives = 99/124 (79%), Gaps = 4/124 (3%)
Frame = -2
Query: 712 KPPLSSSSLKRKC----SSETLGSGKCGSSSGRCHCSQKSRKMRLKRVVRVPAISLKMAD 545
KPPL+ +++C SE+ GS+ G+CHC +KSRK R+KR VRVPAIS K+AD
Sbjct: 185 KPPLAGHPYRKRCLEHEHSESFSGKVSGSAYGKCHC-KKSRKNRMKRTVRVPAISAKIAD 243
Query: 544 IPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDAAMLVVTYEGEHNH 365
IPPD+YSWRKYGQKPIKGSPHPRGYYKCS+ RGCPARKHVERALDD AML+VTYEGEH H
Sbjct: 244 IPPDEYSWRKYGQKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDPAMLIVTYEGEHRH 303
Query: 364 ALSA 353
SA
Sbjct: 304 NQSA 307
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 619,155,647
Number of Sequences: 1393205
Number of extensions: 13832825
Number of successful extensions: 41694
Number of sequences better than 10.0: 234
Number of HSP's better than 10.0 without gapping: 38968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41417
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 32936043699
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
