Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003551A_C02 KMC003551A_c02
(679 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_564507.1| expressed protein; protein id: At1g47480.1, sup... 115 7e-25
gb|AAM61103.1| unknown [Arabidopsis thaliana] 114 2e-24
gb|AAL57633.1| AT3g48690/T8P19_200 [Arabidopsis thaliana] 93 3e-18
ref|NP_190438.1| putative protein; protein id: At3g48690.1, supp... 93 3e-18
ref|NP_175389.1| unknown protein; protein id: At1g49660.1 [Arabi... 82 7e-15
>ref|NP_564507.1| expressed protein; protein id: At1g47480.1, supported by cDNA:
111056. [Arabidopsis thaliana] gi|25405208|pir||A96515
hypothetical protein F16N3.25 [imported] - Arabidopsis
thaliana gi|5668813|gb|AAD46039.1|AC007519_24 Similar to
gb|X77136 HSR203J protein from Nicotiana tabacum and is
a member of the PF|00135 Carboxylesterase family. ESTs
gb|Z25688 and gb|F14025 come from this gene.
[Arabidopsis thaliana]
Length = 314
Score = 115 bits (287), Expect = 7e-25
Identities = 49/90 (54%), Positives = 66/90 (72%)
Frame = -3
Query: 677 GSDDPLINPFVEEAPGFEGVGCNKVLVIVAEKDILKERGKLYHKKLVNSSWQGTAEFYEI 498
GSDDP INPF + +P G+GC +V++ VAEKDIL ERGK+Y+++LV S W+G E E
Sbjct: 222 GSDDPWINPFADGSPDLGGLGCERVMITVAEKDILNERGKMYYERLVKSEWKGKVEIMET 281
Query: 497 QGEDHVFHIFNPDCDNAKSLFKRIAAFINE 408
+ +DHVFHIF PDCD A + + +A FIN+
Sbjct: 282 KEKDHVFHIFEPDCDEAMEMVRCLALFINQ 311
>gb|AAM61103.1| unknown [Arabidopsis thaliana]
Length = 314
Score = 114 bits (284), Expect = 2e-24
Identities = 49/90 (54%), Positives = 65/90 (71%)
Frame = -3
Query: 677 GSDDPLINPFVEEAPGFEGVGCNKVLVIVAEKDILKERGKLYHKKLVNSSWQGTAEFYEI 498
GSDDP INPF + +P G+GC +V++ VAEKDIL ERGK+Y ++LV S W+G E E
Sbjct: 222 GSDDPWINPFADGSPDLGGLGCERVMITVAEKDILNERGKMYFERLVKSEWKGKVEIMET 281
Query: 497 QGEDHVFHIFNPDCDNAKSLFKRIAAFINE 408
+ +DHVFHIF PDCD A + + +A FIN+
Sbjct: 282 KEKDHVFHIFEPDCDEAMEMVRCLALFINQ 311
>gb|AAL57633.1| AT3g48690/T8P19_200 [Arabidopsis thaliana]
Length = 324
Score = 93.2 bits (230), Expect = 3e-18
Identities = 43/88 (48%), Positives = 56/88 (62%)
Frame = -3
Query: 677 GSDDPLINPFVEEAPGFEGVGCNKVLVIVAEKDILKERGKLYHKKLVNSSWQGTAEFYEI 498
G+DDPL+N E+ G+GC KVLV+VAEKD L +G Y KL S W+G E E
Sbjct: 233 GTDDPLLNVVQSESVDLSGLGCGKVLVMVAEKDALVRQGWGYAAKLEKSGWKGEVEVVES 292
Query: 497 QGEDHVFHIFNPDCDNAKSLFKRIAAFI 414
+GEDHVFH+ P+CDNA + + + FI
Sbjct: 293 EGEDHVFHLLKPECDNAIEVMHKFSGFI 320
>ref|NP_190438.1| putative protein; protein id: At3g48690.1, supported by cDNA:
gi_18086340 [Arabidopsis thaliana]
gi|11279652|pir||T46213 hypothetical protein T8P19.200 -
Arabidopsis thaliana gi|6523100|emb|CAB62358.1| putative
protein [Arabidopsis thaliana]
Length = 324
Score = 93.2 bits (230), Expect = 3e-18
Identities = 43/88 (48%), Positives = 56/88 (62%)
Frame = -3
Query: 677 GSDDPLINPFVEEAPGFEGVGCNKVLVIVAEKDILKERGKLYHKKLVNSSWQGTAEFYEI 498
G+DDPL+N E+ G+GC KVLV+VAEKD L +G Y KL S W+G E E
Sbjct: 233 GTDDPLLNVVQSESVDLSGLGCGKVLVMVAEKDALVRQGWGYAAKLEKSGWKGEVEVVES 292
Query: 497 QGEDHVFHIFNPDCDNAKSLFKRIAAFI 414
+GEDHVFH+ P+CDNA + + + FI
Sbjct: 293 EGEDHVFHLLKPECDNAIEVMHKFSGFI 320
>ref|NP_175389.1| unknown protein; protein id: At1g49660.1 [Arabidopsis thaliana]
gi|25405326|pir||C96533 hypothetical protein F14J22.11
[imported] - Arabidopsis thaliana
gi|10120427|gb|AAG13052.1|AC011807_11 Unknown protein
[Arabidopsis thaliana]
Length = 319
Score = 82.0 bits (201), Expect = 7e-15
Identities = 41/88 (46%), Positives = 50/88 (56%)
Frame = -3
Query: 677 GSDDPLINPFVEEAPGFEGVGCNKVLVIVAEKDILKERGKLYHKKLVNSSWQGTAEFYEI 498
G+DDPL N F G+GC+KVLV VA KD+ +G Y KL W+GT E E
Sbjct: 231 GTDDPLFN-VNGSGSDFSGLGCDKVLVAVAGKDVFVRQGLAYAAKLEKCEWEGTVEVVEE 289
Query: 497 QGEDHVFHIFNPDCDNAKSLFKRIAAFI 414
+GEDHVFH+ NP D A K+ FI
Sbjct: 290 EGEDHVFHLQNPKSDKALKFLKKFVEFI 317
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 547,116,697
Number of Sequences: 1393205
Number of extensions: 10906681
Number of successful extensions: 28848
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 27933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28818
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29987172312
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
