Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003532A_C01 KMC003532A_c01
(1091 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_567466.1| Expressed protein; protein id: At4g15470.1, sup... 315 6e-85
gb|AAL07001.1| AT4g15470/dl3775w [Arabidopsis thaliana] 254 1e-66
ref|NP_171806.1| putative glutamate/aspartate-binding peptide; p... 244 2e-63
gb|AAK71568.1|AC087852_28 putative receptor-associated protein [... 243 5e-63
ref|NP_192178.1| putative glutamate-/aspartate-binding peptide; ... 229 4e-59
>ref|NP_567466.1| Expressed protein; protein id: At4g15470.1, supported by cDNA:
gi_15215826, supported by cDNA: gi_15810200, supported by
cDNA: gi_20453266 [Arabidopsis thaliana]
gi|15215827|gb|AAK91458.1| AT4g15470/dl3775w [Arabidopsis
thaliana] gi|20453267|gb|AAM19872.1| AT4g15470/dl3775w
[Arabidopsis thaliana]
Length = 256
Score = 315 bits (808), Expect = 6e-85
Identities = 160/240 (66%), Positives = 191/240 (78%), Gaps = 3/240 (1%)
Frame = -2
Query: 1012 KSDDHELDIESG---ETLYPGLSLGENQLRWGFIRKVYGILSAQIVLTTLVSVLTVFYAP 842
+S ++D+E G TLYPGLS GENQLRWGFIRKVYGILSAQ++LTTL+S + V P
Sbjct: 17 RSAGKDIDLEMGVGEATLYPGLSYGENQLRWGFIRKVYGILSAQLLLTTLISAVVVLNPP 76
Query: 841 LNLLLRGNSPLLLFLVFLPFIFLIPLLRYQQKHPHNYILLGLFTVSISMTVGVTCANTDG 662
+N LL G+ +LLFL +PFI + PL Y QKHP N ILL LFTVS+S TVGV+CA T+G
Sbjct: 77 VNDLLTGSPGILLFLCIVPFILIWPLHIYHQKHPVNLILLALFTVSLSFTVGVSCAMTEG 136
Query: 661 KIVLEALILTSAVVSSLTGYAFWASKKGKDFSYLGPILFTCLFTLFLVGMMQMFFPLGPA 482
+IVL+ALILT +VV SLT Y FWA+KKGKDFS+LGPILFT L L + +QMFFPLGP
Sbjct: 137 RIVLQALILTLSVVGSLTAYTFWAAKKGKDFSFLGPILFTSLIILVVTSFIQMFFPLGPT 196
Query: 481 SHALYGGIGAMIFSGYIVYDTDHLIKRFTYDEYIGASVTLYLDILNLFLSILRILREANH 302
S A+YGG A++F GYIVYDTD+LIKRFTYDEYI ASV LYLDILNLFL+ILRILR+ ++
Sbjct: 197 SVAVYGGFSALVFCGYIVYDTDNLIKRFTYDEYILASVALYLDILNLFLTILRILRQGDN 256
>gb|AAL07001.1| AT4g15470/dl3775w [Arabidopsis thaliana]
Length = 226
Score = 254 bits (650), Expect = 1e-66
Identities = 128/200 (64%), Positives = 154/200 (77%), Gaps = 3/200 (1%)
Frame = -2
Query: 1012 KSDDHELDIESG---ETLYPGLSLGENQLRWGFIRKVYGILSAQIVLTTLVSVLTVFYAP 842
+S ++D+E G TLYPGLS GENQLRWGFIRKVYGILSAQ++LTTL+S + V P
Sbjct: 17 RSAGKDIDLEMGVGEATLYPGLSYGENQLRWGFIRKVYGILSAQLLLTTLISAVVVLNPP 76
Query: 841 LNLLLRGNSPLLLFLVFLPFIFLIPLLRYQQKHPHNYILLGLFTVSISMTVGVTCANTDG 662
+N LL G+ +LLFL +PFI + PL Y QKHP N ILL LFTVS+S TVGV+CA T+G
Sbjct: 77 VNDLLTGSPGILLFLCIVPFILIWPLHIYHQKHPVNLILLALFTVSLSFTVGVSCAMTEG 136
Query: 661 KIVLEALILTSAVVSSLTGYAFWASKKGKDFSYLGPILFTCLFTLFLVGMMQMFFPLGPA 482
+IVL+ALILT +VV SLT Y FWA+KKGKDFS+LGPILFT L L + +QMFFPLGP
Sbjct: 137 RIVLQALILTLSVVGSLTAYTFWAAKKGKDFSFLGPILFTSLIILVVTSFIQMFFPLGPT 196
Query: 481 SHALYGGIGAMIFSGYIVYD 422
S A+YGG A++F GYIVYD
Sbjct: 197 SVAVYGGFSALVFCGYIVYD 216
>ref|NP_171806.1| putative glutamate/aspartate-binding peptide; protein id: At1g03070.1
[Arabidopsis thaliana] gi|25304934|pir||E86161 F10O3.11
protein - Arabidopsis thaliana
gi|4587571|gb|AAD25802.1|AC006550_10 Belongs to the
PF|01027 Uncharacterized protein family UPF0005 with 7
transmembrane domains. [Arabidopsis thaliana]
Length = 247
Score = 244 bits (622), Expect = 2e-63
Identities = 126/239 (52%), Positives = 167/239 (69%), Gaps = 4/239 (1%)
Frame = -2
Query: 1012 KSDDHELDIESGE-TLYPGLSLGENQLRWGFIRKVYGILSAQIVLTTLVSVLTVFYAPLN 836
+ DD E E GE +LYP + L +LRWGFIRKVY I++ Q++ T V+ VF P+
Sbjct: 9 RKDDVETGREGGERSLYPTM-LESPELRWGFIRKVYSIIAFQLLATIAVASTVVFVRPIA 67
Query: 835 LLLRGNSP---LLLFLVFLPFIFLIPLLRYQQKHPHNYILLGLFTVSISMTVGVTCANTD 665
+ S L + L+ P I + PL Y QKHP NY+LLG+FTV+++ VG+TCA T
Sbjct: 68 VFFATTSAGLALWIVLIITPLIVMCPLYYYHQKHPVNYLLLGIFTVALAFAVGLTCAFTS 127
Query: 664 GKIVLEALILTSAVVSSLTGYAFWASKKGKDFSYLGPILFTCLFTLFLVGMMQMFFPLGP 485
GK++LEA ILT+ VV SLT Y FWA+KKG DF++LGP LF L L + ++Q+FFPLG
Sbjct: 128 GKVILEAAILTTVVVLSLTVYTFWAAKKGYDFNFLGPFLFGALIVLMVFALIQIFFPLGR 187
Query: 484 ASHALYGGIGAMIFSGYIVYDTDHLIKRFTYDEYIGASVTLYLDILNLFLSILRILREA 308
S +YG + A+IF GYIVYDTD+LIKR++YDEYI A+V+LYLDI+NLFL++L I R A
Sbjct: 188 ISVMIYGCLAAIIFCGYIVYDTDNLIKRYSYDEYIWAAVSLYLDIINLFLALLTIFRAA 246
>gb|AAK71568.1|AC087852_28 putative receptor-associated protein [Oryza sativa (japonica
cultivar-group)]
Length = 229
Score = 243 bits (619), Expect = 5e-63
Identities = 119/225 (52%), Positives = 161/225 (70%), Gaps = 3/225 (1%)
Frame = -2
Query: 970 LYPGLSLGENQLRWGFIRKVYGILSAQIVLTTLVSVLTVFYAPLNLLLRGNSP---LLLF 800
LYP + L QLRW F+RKVY ILS Q++LT V+ + VF P+ L L +F
Sbjct: 5 LYP-MMLESPQLRWAFVRKVYAILSIQMLLTIAVASVVVFVRPVALFFVSTPAGFALYIF 63
Query: 799 LVFLPFIFLIPLLRYQQKHPHNYILLGLFTVSISMTVGVTCANTDGKIVLEALILTSAVV 620
L+ LPFI L PL Y Q+HP N +LL LFT +IS VG+TCA T G+++LE+ ILT+AVV
Sbjct: 64 LIILPFIVLCPLYYYYQRHPVNLLLLALFTAAISFAVGLTCAFTKGEVILESAILTAAVV 123
Query: 619 SSLTGYAFWASKKGKDFSYLGPILFTCLFTLFLVGMMQMFFPLGPASHALYGGIGAMIFS 440
SLT Y FWA+++G DFS+LGP LF + L + ++Q+FFPLG S +YGG+ A++F
Sbjct: 124 VSLTAYTFWAARRGHDFSFLGPFLFAAVMILMVFALIQVFFPLGRVSLMIYGGLAALVFC 183
Query: 439 GYIVYDTDHLIKRFTYDEYIGASVTLYLDILNLFLSILRILREAN 305
GYIVYDTD+LIKR++YDEY+ A+V LYLD++NLFLS+L + R ++
Sbjct: 184 GYIVYDTDNLIKRYSYDEYVWAAVALYLDVINLFLSLLTLFRASD 228
>ref|NP_192178.1| putative glutamate-/aspartate-binding peptide; protein id:
At4g02690.1 [Arabidopsis thaliana] gi|7486855|pir||T01080
hypothetical protein T10P11.3.1 - Arabidopsis thaliana
gi|3892058|gb|AAC78271.1|AAC78271 putative
glutamate-/aspartate-binding peptide [Arabidopsis
thaliana] gi|7269754|emb|CAB77754.1| putative
glutamate-/aspartate-binding peptide [Arabidopsis
thaliana]
Length = 248
Score = 229 bits (585), Expect = 4e-59
Identities = 120/238 (50%), Positives = 162/238 (67%), Gaps = 5/238 (2%)
Frame = -2
Query: 1012 KSDDHELDIESGETL-YPGLSLGEN-QLRWGFIRKVYGILSAQIVLTTLVSVLTVFYAPL 839
+ DD E + S L YP + EN +LRWGFIRKVY I++ Q++ T V+ V P+
Sbjct: 9 RKDDVETGVSSRRPLLYPAMH--ENPELRWGFIRKVYSIIAFQLLATVAVAATVVTVRPI 66
Query: 838 NLLLRGNS---PLLLFLVFLPFIFLIPLLRYQQKHPHNYILLGLFTVSISMTVGVTCANT 668
L L + ++ P I L PL Y QKHP NY+LLG+FT++++ VG+TCA T
Sbjct: 67 ALFFATTGLGLALYIVIIITPLIVLCPLYYYHQKHPVNYLLLGIFTLALAFVVGLTCAFT 126
Query: 667 DGKIVLEALILTSAVVSSLTGYAFWASKKGKDFSYLGPILFTCLFTLFLVGMMQMFFPLG 488
+GK++LE++ILTS VV SLT Y FWA++KG DF++LGP LF L L ++Q+ FPLG
Sbjct: 127 NGKVILESVILTSVVVLSLTLYTFWAARKGYDFNFLGPFLFGALTVLIFFALIQILFPLG 186
Query: 487 PASHALYGGIGAMIFSGYIVYDTDHLIKRFTYDEYIGASVTLYLDILNLFLSILRILR 314
S +YG + ++IF GYIVYDTD+LIKR TYDEYI A+V+LYLDI+NLFL +L +LR
Sbjct: 187 RVSVMIYGCLVSIIFCGYIVYDTDNLIKRHTYDEYIWAAVSLYLDIINLFLYLLTVLR 244
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 943,891,745
Number of Sequences: 1393205
Number of extensions: 22891499
Number of successful extensions: 151553
Number of sequences better than 10.0: 1276
Number of HSP's better than 10.0 without gapping: 90125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127351
length of database: 448,689,247
effective HSP length: 125
effective length of database: 274,538,622
effective search space used: 65340192036
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
