Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003524A_C01 KMC003524A_c01
(611 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM66136.1| polyneuridine aldehyde esterase, putative [Arabid... 148 5e-35
pir||F86463 hypothetical protein F12G12.19 - Arabidopsis thalian... 148 5e-35
ref|NP_174661.1| polyneuridine aldehyde esterase, putative; prot... 148 5e-35
gb|AAK96810.1| Unknown protein [Arabidopsis thaliana] gi|2014837... 145 3e-34
ref|NP_192728.1| putative host response protein; protein id: At4... 145 3e-34
>gb|AAM66136.1| polyneuridine aldehyde esterase, putative [Arabidopsis thaliana]
Length = 347
Score = 148 bits (374), Expect = 5e-35
Identities = 69/84 (82%), Positives = 78/84 (92%)
Frame = -1
Query: 611 VSMRHSPLGPIMEKLCLSPDKYGAGRRFYIQTLDDRALSPDVQEKLVRENPPEGVYKIKG 432
+SMR PLGP+MEK+ L+ ++YG GRRFY+QTLDDRALSPDVQEKLVREN PEGV+KIKG
Sbjct: 264 ISMRPVPLGPMMEKVSLTAERYGKGRRFYVQTLDDRALSPDVQEKLVRENSPEGVFKIKG 323
Query: 431 SDHCPFFSKPQSLHKILVEIAQIP 360
SDHCPFFSKPQSLHKIL+EIAQIP
Sbjct: 324 SDHCPFFSKPQSLHKILLEIAQIP 347
>pir||F86463 hypothetical protein F12G12.19 - Arabidopsis thaliana
gi|10086476|gb|AAG12536.1|AC015446_17 Unknown protein
[Arabidopsis thaliana]
Length = 256
Score = 148 bits (374), Expect = 5e-35
Identities = 69/84 (82%), Positives = 78/84 (92%)
Frame = -1
Query: 611 VSMRHSPLGPIMEKLCLSPDKYGAGRRFYIQTLDDRALSPDVQEKLVRENPPEGVYKIKG 432
+SMR PLGP+MEK+ L+ ++YG GRRFY+QTLDDRALSPDVQEKLVREN PEGV+KIKG
Sbjct: 173 ISMRPVPLGPMMEKVSLTAERYGKGRRFYVQTLDDRALSPDVQEKLVRENSPEGVFKIKG 232
Query: 431 SDHCPFFSKPQSLHKILVEIAQIP 360
SDHCPFFSKPQSLHKIL+EIAQIP
Sbjct: 233 SDHCPFFSKPQSLHKILLEIAQIP 256
>ref|NP_174661.1| polyneuridine aldehyde esterase, putative; protein id: At1g33990.1,
supported by cDNA: 8327., supported by cDNA: gi_15983465
[Arabidopsis thaliana]
gi|10092445|gb|AAG12848.1|AC079286_5 polyneuridine
aldehyde esterase, putative; 10297-12282 [Arabidopsis
thaliana] gi|15983466|gb|AAL11601.1|AF424607_1
At1g33990/F12G12_220 [Arabidopsis thaliana]
Length = 348
Score = 148 bits (374), Expect = 5e-35
Identities = 69/84 (82%), Positives = 78/84 (92%)
Frame = -1
Query: 611 VSMRHSPLGPIMEKLCLSPDKYGAGRRFYIQTLDDRALSPDVQEKLVRENPPEGVYKIKG 432
+SMR PLGP+MEK+ L+ ++YG GRRFY+QTLDDRALSPDVQEKLVREN PEGV+KIKG
Sbjct: 265 ISMRPVPLGPMMEKVSLTAERYGKGRRFYVQTLDDRALSPDVQEKLVRENSPEGVFKIKG 324
Query: 431 SDHCPFFSKPQSLHKILVEIAQIP 360
SDHCPFFSKPQSLHKIL+EIAQIP
Sbjct: 325 SDHCPFFSKPQSLHKILLEIAQIP 348
>gb|AAK96810.1| Unknown protein [Arabidopsis thaliana] gi|20148373|gb|AAM10077.1|
unknown protein [Arabidopsis thaliana]
Length = 349
Score = 145 bits (367), Expect = 3e-34
Identities = 69/84 (82%), Positives = 76/84 (90%)
Frame = -1
Query: 611 VSMRHSPLGPIMEKLCLSPDKYGAGRRFYIQTLDDRALSPDVQEKLVRENPPEGVYKIKG 432
+SMR PLGP+MEKL LS ++YG GRRFY+QTLDD ALSPDVQEKLVREN PE V+KIKG
Sbjct: 266 ISMRPVPLGPMMEKLSLSAERYGKGRRFYVQTLDDLALSPDVQEKLVRENSPEAVFKIKG 325
Query: 431 SDHCPFFSKPQSLHKILVEIAQIP 360
SDHCPFFSKPQSLHKIL+EIAQIP
Sbjct: 326 SDHCPFFSKPQSLHKILLEIAQIP 349
>ref|NP_192728.1| putative host response protein; protein id: At4g09900.1
[Arabidopsis thaliana] gi|7485010|pir||T03994 host
response protein homolog T5L19.30 - Arabidopsis thaliana
gi|4538993|emb|CAB39614.1| putative host response
protein [Arabidopsis thaliana]
gi|7267686|emb|CAB78113.1| putative host response
protein [Arabidopsis thaliana]
Length = 256
Score = 145 bits (367), Expect = 3e-34
Identities = 69/84 (82%), Positives = 76/84 (90%)
Frame = -1
Query: 611 VSMRHSPLGPIMEKLCLSPDKYGAGRRFYIQTLDDRALSPDVQEKLVRENPPEGVYKIKG 432
+SMR PLGP+MEKL LS ++YG GRRFY+QTLDD ALSPDVQEKLVREN PE V+KIKG
Sbjct: 173 ISMRPVPLGPMMEKLSLSAERYGKGRRFYVQTLDDLALSPDVQEKLVRENSPEAVFKIKG 232
Query: 431 SDHCPFFSKPQSLHKILVEIAQIP 360
SDHCPFFSKPQSLHKIL+EIAQIP
Sbjct: 233 SDHCPFFSKPQSLHKILLEIAQIP 256
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 537,111,890
Number of Sequences: 1393205
Number of extensions: 11913589
Number of successful extensions: 26720
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 25313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26554
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24568846532
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
