Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003503A_C01 KMC003503A_c01
(617 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_568822.1| glycosyl hydrolase family 17; protein id: At5g5... 164 7e-40
gb|AAM66024.1| beta-1,3-glucanase-like protein [Arabidopsis thal... 164 7e-40
gb|AAL77689.1| AT5g55180/MCO15_13 [Arabidopsis thaliana] 164 7e-40
dbj|BAB17320.1| elicitor inducible beta-1,3-glucanase Nt-SubE76 ... 163 2e-39
dbj|BAB08587.1| beta-1,3-glucanase-like protein [Arabidopsis tha... 142 3e-33
>ref|NP_568822.1| glycosyl hydrolase family 17; protein id: At5g55180.1, supported by
cDNA: 7119., supported by cDNA: gi_18700154 [Arabidopsis
thaliana]
Length = 460
Score = 164 bits (416), Expect = 7e-40
Identities = 72/92 (78%), Positives = 81/92 (87%)
Frame = -1
Query: 569 GRTWCVANGGYSEEKLQAALDYACGEGGADCSAIQPGATCYDPNTLEAHASFAFNSYYQK 390
G+TWCVANG ++EKLQ LDYACGEGGADC IQPGATCY+P +LEAHAS+AFNSYYQK
Sbjct: 369 GQTWCVANGKTTKEKLQEGLDYACGEGGADCRPIQPGATCYNPESLEAHASYAFNSYYQK 428
Query: 389 KARGTGTCDFGGAAYVVTQAPKYGTCEFPTGY 294
ARG GTC+FGGAAYVV+Q PKYG CEFPTG+
Sbjct: 429 NARGVGTCNFGGAAYVVSQPPKYGKCEFPTGH 460
>gb|AAM66024.1| beta-1,3-glucanase-like protein [Arabidopsis thaliana]
Length = 460
Score = 164 bits (416), Expect = 7e-40
Identities = 72/92 (78%), Positives = 81/92 (87%)
Frame = -1
Query: 569 GRTWCVANGGYSEEKLQAALDYACGEGGADCSAIQPGATCYDPNTLEAHASFAFNSYYQK 390
G+TWCVANG ++EKLQ LDYACGEGGADC IQPGATCY+P +LEAHAS+AFNSYYQK
Sbjct: 369 GQTWCVANGKTTKEKLQEGLDYACGEGGADCRPIQPGATCYNPESLEAHASYAFNSYYQK 428
Query: 389 KARGTGTCDFGGAAYVVTQAPKYGTCEFPTGY 294
ARG GTC+FGGAAYVV+Q PKYG CEFPTG+
Sbjct: 429 NARGVGTCNFGGAAYVVSQPPKYGKCEFPTGH 460
>gb|AAL77689.1| AT5g55180/MCO15_13 [Arabidopsis thaliana]
Length = 460
Score = 164 bits (416), Expect = 7e-40
Identities = 72/92 (78%), Positives = 81/92 (87%)
Frame = -1
Query: 569 GRTWCVANGGYSEEKLQAALDYACGEGGADCSAIQPGATCYDPNTLEAHASFAFNSYYQK 390
G+TWCVANG ++EKLQ LDYACGEGGADC IQPGATCY+P +LEAHAS+AFNSYYQK
Sbjct: 369 GQTWCVANGKTTKEKLQEGLDYACGEGGADCRPIQPGATCYNPESLEAHASYAFNSYYQK 428
Query: 389 KARGTGTCDFGGAAYVVTQAPKYGTCEFPTGY 294
ARG GTC+FGGAAYVV+Q PKYG CEFPTG+
Sbjct: 429 NARGVGTCNFGGAAYVVSQPPKYGKCEFPTGH 460
>dbj|BAB17320.1| elicitor inducible beta-1,3-glucanase Nt-SubE76 [Nicotiana tabacum]
Length = 467
Score = 163 bits (412), Expect = 2e-39
Identities = 73/92 (79%), Positives = 78/92 (84%)
Frame = -1
Query: 569 GRTWCVANGGYSEEKLQAALDYACGEGGADCSAIQPGATCYDPNTLEAHASFAFNSYYQK 390
G TWCVAN + EKLQAALDYACGEGGADC IQ GATCYDP+TLEAHAS+AFNSYYQK
Sbjct: 376 GNTWCVANEKAAREKLQAALDYACGEGGADCRPIQQGATCYDPDTLEAHASYAFNSYYQK 435
Query: 389 KARGTGTCDFGGAAYVVTQAPKYGTCEFPTGY 294
RG TCDF GAAYVVTQ PKYG+C+FPTGY
Sbjct: 436 NTRGVSTCDFSGAAYVVTQHPKYGSCKFPTGY 467
>dbj|BAB08587.1| beta-1,3-glucanase-like protein [Arabidopsis thaliana]
Length = 471
Score = 142 bits (359), Expect = 3e-33
Identities = 63/81 (77%), Positives = 71/81 (86%)
Frame = -1
Query: 569 GRTWCVANGGYSEEKLQAALDYACGEGGADCSAIQPGATCYDPNTLEAHASFAFNSYYQK 390
G+TWCVANG ++EKLQ LDYACGEGGADC IQPGATCY+P +LEAHAS+AFNSYYQK
Sbjct: 369 GQTWCVANGKTTKEKLQEGLDYACGEGGADCRPIQPGATCYNPESLEAHASYAFNSYYQK 428
Query: 389 KARGTGTCDFGGAAYVVTQAP 327
ARG GTC+FGGAAYVV+Q P
Sbjct: 429 NARGVGTCNFGGAAYVVSQPP 449
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 577,803,177
Number of Sequences: 1393205
Number of extensions: 13936462
Number of successful extensions: 68841
Number of sequences better than 10.0: 390
Number of HSP's better than 10.0 without gapping: 53948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65800
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 24733321959
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
