Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003493A_C01 KMC003493A_c01
(605 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T50645 glucan endo-1,3-beta-D-glucosidase (EC 3.2.1.39) [im... 115 6e-25
sp|P52409|E13B_WHEAT GLUCAN ENDO-1,3-BETA-GLUCOSIDASE PRECURSOR ... 112 4e-24
gb|AAK58515.1|AF249675_1 beta-1,3-glucanase-like protein [Olea e... 110 2e-23
ref|NP_564059.1| glycosyl hydrolase family 17; protein id: At1g1... 107 2e-22
dbj|BAB55504.1| P0638D12.12 [Oryza sativa (japonica cultivar-gro... 103 2e-21
>pir||T50645 glucan endo-1,3-beta-D-glucosidase (EC 3.2.1.39) [imported] -
garden pea gi|7414433|emb|CAB85903.1| beta-1,3 glucanase
[Pisum sativum]
Length = 453
Score = 115 bits (287), Expect = 6e-25
Identities = 49/84 (58%), Positives = 65/84 (77%)
Frame = -2
Query: 601 KWCTAKQGASEAALQANIDFACSTKGVDCGPIKQGGPCFKPNTVRAHASFAMNAYYQASG 422
KWC K AS ALQANI++ CS +G+DC PI+ GG C+ N V+A A++AMNAYYQA+G
Sbjct: 369 KWCVPKADASPGALQANINYVCS-QGIDCRPIQPGGVCYAANNVKAIATYAMNAYYQANG 427
Query: 421 RHDTDCDFGHTGVVTSINPSYETC 350
+HD +CDF H+GV TS+NPS++ C
Sbjct: 428 KHDYNCDFSHSGVTTSVNPSHDNC 451
>sp|P52409|E13B_WHEAT GLUCAN ENDO-1,3-BETA-GLUCOSIDASE PRECURSOR ((1->3)-BETA-GLUCAN
ENDOHYDROLASE) ((1->3)-BETA-GLUCANASE)
(BETA-1,3-ENDOGLUCANASE) gi|7489680|pir||T06268 probable
beta-1,3-glucanase (EC 3.2.1.-) - wheat
gi|924953|gb|AAA90953.1| beta 1,3-glucanase
Length = 461
Score = 112 bits (280), Expect = 4e-24
Identities = 52/88 (59%), Positives = 63/88 (71%)
Frame = -2
Query: 601 KWCTAKQGASEAALQANIDFACSTKGVDCGPIKQGGPCFKPNTVRAHASFAMNAYYQASG 422
KWC AK GA+ LQ NI++AC VDC PI+ GG CF PN+++AHAS+ MNAYYQA+G
Sbjct: 376 KWCVAKDGANGTDLQNNINYACGF--VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANG 433
Query: 421 RHDTDCDFGHTGVVTSINPSYETCTYVS 338
D CDF TG+VTS +PSY C YVS
Sbjct: 434 HTDLACDFKGTGIVTSSDPSYGGCKYVS 461
>gb|AAK58515.1|AF249675_1 beta-1,3-glucanase-like protein [Olea europaea]
Length = 460
Score = 110 bits (274), Expect = 2e-23
Identities = 45/89 (50%), Positives = 63/89 (70%)
Frame = -2
Query: 598 WCTAKQGASEAALQANIDFACSTKGVDCGPIKQGGPCFKPNTVRAHASFAMNAYYQASGR 419
WC K G S+ L NI++AC +G+DCGPI+ GG CF+PNTV+AHA++ MN YYQ++GR
Sbjct: 372 WCVPKPGVSDDQLTGNINYACG-QGIDCGPIQPGGACFEPNTVKAHAAYVMNLYYQSAGR 430
Query: 418 HDTDCDFGHTGVVTSINPSYETCTYVSSA 332
+ +CDF T +T+ NPSY C + S +
Sbjct: 431 NSWNCDFSQTATLTNTNPSYGACNFPSGS 459
>ref|NP_564059.1| glycosyl hydrolase family 17; protein id: At1g18650.1, supported by
cDNA: 32195. [Arabidopsis thaliana]
gi|25518423|pir||C86320 hypothetical protein F25I16.1 -
Arabidopsis thaliana gi|9795591|gb|AAF98409.1|AC026238_1
Hypothetical protein [Arabidopsis thaliana]
gi|21592752|gb|AAM64701.1| unknown [Arabidopsis
thaliana]
Length = 184
Score = 107 bits (266), Expect = 2e-22
Identities = 52/128 (40%), Positives = 70/128 (54%), Gaps = 15/128 (11%)
Frame = -2
Query: 598 WCTAKQGASEAALQANIDFACSTKGVDCGPIKQGGPCFKPNTVRAHASFAMNAYYQASGR 419
WC K+G SEA LQ +D+AC G DCGPI Q GPCF PNTV++H S+A+N+++Q G+
Sbjct: 21 WCVCKEGLSEAMLQKTLDYACGA-GADCGPIHQTGPCFNPNTVKSHCSYAVNSFFQKKGQ 79
Query: 418 HDTDCDFGHTGVVTSINPSYETCTYVSSAEG---------------PKQKVKNPDTVGSP 284
CDF T ++ +PSY TC + +SA G P P T+
Sbjct: 80 SLGTCDFAGTATFSASDPSYTTCPFPASASGSGTTTPVTTTPSTRVPTTTNTRPYTITPS 139
Query: 283 TGSPVGSP 260
TG +G P
Sbjct: 140 TGGGLGIP 147
>dbj|BAB55504.1| P0638D12.12 [Oryza sativa (japonica cultivar-group)]
Length = 764
Score = 103 bits (257), Expect = 2e-21
Identities = 44/93 (47%), Positives = 63/93 (67%)
Frame = -2
Query: 598 WCTAKQGASEAALQANIDFACSTKGVDCGPIKQGGPCFKPNTVRAHASFAMNAYYQASGR 419
WC A ASE LQ +++AC VDC I+ PC++P+T+ +HAS+A N+YYQ +G
Sbjct: 363 WCVASANASETDLQNGLNWACGPGNVDCSAIQPSQPCYQPDTLASHASYAFNSYYQQNGA 422
Query: 418 HDTDCDFGHTGVVTSINPSYETCTYVSSAEGPK 320
+D CDFG TGV T+ +PSY+TC Y+++ E K
Sbjct: 423 NDVACDFGGTGVRTTKDPSYDTCVYMAADEHNK 455
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 532,496,094
Number of Sequences: 1393205
Number of extensions: 12017035
Number of successful extensions: 36704
Number of sequences better than 10.0: 158
Number of HSP's better than 10.0 without gapping: 34070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36496
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
