Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003490A_C01 KMC003490A_c01
(515 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA34854.1| hypothetical protein [Neurospora crassa] 35 0.39
ref|XP_232578.1| similar to junctophilin 1; junctophilin type 1;... 34 0.87
dbj|BAB90549.1| B1065G12.31 [Oryza sativa (japonica cultivar-gro... 29 1.1
ref|XP_234255.1| similar to insulinoma-associated 2; mlt 1 gene;... 33 1.9
ref|NP_064683.1| insulinoma-associated 2; mlt 1 gene; mlt 1 [Mus... 32 3.3
>gb|EAA34854.1| hypothetical protein [Neurospora crassa]
Length = 1106
Score = 35.4 bits (80), Expect = 0.39
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 14/91 (15%)
Frame = +1
Query: 61 DSIKFTNFSRFQQIQDF*ISSNQFKSQIPGTKTKIGWRRNNDGARTSSSSSL-------- 216
DSI++ F+ QQI NQ + +T+ G +N D +RT+S +L
Sbjct: 531 DSIRYQLFAHSQQI-------NQQQLLAHANRTRAGGSQNTDRSRTNSFDNLPTSPPVRP 583
Query: 217 ------YLLQTQNPKFVTPSCSKTQSSPLTS 291
Y QNP + P+ SSP+T+
Sbjct: 584 EQLLYGYAFPLQNPAYFHPALQTYPSSPVTA 614
>ref|XP_232578.1| similar to junctophilin 1; junctophilin type 1; mitsugumin72 [Mus
musculus] [Rattus norvegicus]
Length = 463
Score = 34.3 bits (77), Expect = 0.87
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +1
Query: 142 IPGTKTKIGWRRNNDGARTSSSSSLYLLQTQNPKFVTPSCSKTQSSPLTSLLPVPSAHLL 321
I TKT+ R +GA+ +++ + ++ N + + S T + PLT LLP PS H L
Sbjct: 370 IRNTKTREKVDRAIEGAQRAAAMARTKVEIANSRDSDKALSTTPTVPLTDLLPTPSDHSL 429
Query: 322 TS 327
++
Sbjct: 430 ST 431
>dbj|BAB90549.1| B1065G12.31 [Oryza sativa (japonica cultivar-group)]
Length = 588
Score = 28.9 bits (63), Expect(2) = 1.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 347 DAGGGGSPPTDPEPIHSNPR 406
DAGGG PEP+H+ PR
Sbjct: 118 DAGGGRGSRAGPEPMHARPR 137
Score = 23.9 bits (50), Expect(2) = 1.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 271 QSSPLTSLLPVPSAHLLTSDSDTKHRCWRRR 363
+++P+ LP + ++D + R WRRR
Sbjct: 57 RAAPMFPRLPPREYRYVVHEADDRARAWRRR 87
>ref|XP_234255.1| similar to insulinoma-associated 2; mlt 1 gene; mlt 1 [Mus
musculus] [Rattus norvegicus]
Length = 349
Score = 33.1 bits (74), Expect = 1.9
Identities = 14/43 (32%), Positives = 23/43 (52%)
Frame = +1
Query: 226 QTQNPKFVTPSCSKTQSSPLTSLLPVPSAHLLTSDSDTKHRCW 354
+T + + TP +++PLT P+ AH ++D KHR W
Sbjct: 233 ETGSARATTPGFGSERTAPLTFACPLCGAHFPSADIREKHRLW 275
>ref|NP_064683.1| insulinoma-associated 2; mlt 1 gene; mlt 1 [Mus musculus]
gi|7259321|dbj|BAA92776.1| Mlt 1 [Mus musculus]
Length = 493
Score = 32.3 bits (72), Expect = 3.3
Identities = 14/43 (32%), Positives = 23/43 (52%)
Frame = +1
Query: 226 QTQNPKFVTPSCSKTQSSPLTSLLPVPSAHLLTSDSDTKHRCW 354
+T + + TP +++PLT P+ AH ++D KHR W
Sbjct: 377 ETGSARAPTPGFGSERTAPLTFACPLCGAHFPSADIREKHRLW 419
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 462,966,934
Number of Sequences: 1393205
Number of extensions: 10702200
Number of successful extensions: 34558
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 32150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34468
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16154357632
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
