Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003484A_C01 KMC003484A_c01
(467 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_568218.1| putative protein; protein id: At5g09850.1, supp... 59 2e-08
dbj|BAB09406.1| gb|AAF19567.1~gene_id:MYH9.6~similar to unknown ... 59 2e-08
gb|AAL25557.1| AT5g09850/MYH9_6 [Arabidopsis thaliana] gi|201472... 59 2e-08
dbj|BAC16486.1| contains ESTs AU092606(C52561),AU063213(C53672),... 35 0.50
gb|AAN73018.1| endothelin-converting enzyme [Locusta migratoria] 32 3.3
>ref|NP_568218.1| putative protein; protein id: At5g09850.1, supported by cDNA:
gi_16648729 [Arabidopsis thaliana]
Length = 353
Score = 59.3 bits (142), Expect = 2e-08
Identities = 28/43 (65%), Positives = 34/43 (78%)
Frame = -3
Query: 465 EAANAKKQRTIQVMDLHELPKPKNKNTFFAKNKGGAGSNGRHW 337
+A NAKKQRTIQVMD+H++PKPK K FF + KGG+ GRHW
Sbjct: 313 QAENAKKQRTIQVMDIHDIPKPK-KGGFFPR-KGGSSQGGRHW 353
>dbj|BAB09406.1| gb|AAF19567.1~gene_id:MYH9.6~similar to unknown protein
[Arabidopsis thaliana]
Length = 361
Score = 59.3 bits (142), Expect = 2e-08
Identities = 28/43 (65%), Positives = 34/43 (78%)
Frame = -3
Query: 465 EAANAKKQRTIQVMDLHELPKPKNKNTFFAKNKGGAGSNGRHW 337
+A NAKKQRTIQVMD+H++PKPK K FF + KGG+ GRHW
Sbjct: 321 QAENAKKQRTIQVMDIHDIPKPK-KGGFFPR-KGGSSQGGRHW 361
>gb|AAL25557.1| AT5g09850/MYH9_6 [Arabidopsis thaliana] gi|20147241|gb|AAM10334.1|
AT5g09850/MYH9_6 [Arabidopsis thaliana]
Length = 302
Score = 59.3 bits (142), Expect = 2e-08
Identities = 28/43 (65%), Positives = 34/43 (78%)
Frame = -3
Query: 465 EAANAKKQRTIQVMDLHELPKPKNKNTFFAKNKGGAGSNGRHW 337
+A NAKKQRTIQVMD+H++PKPK K FF + KGG+ GRHW
Sbjct: 262 QAENAKKQRTIQVMDIHDIPKPK-KGGFFPR-KGGSSQGGRHW 302
>dbj|BAC16486.1| contains ESTs
AU092606(C52561),AU063213(C53672),C27675(C52561)~unknown
protein [Oryza sativa (japonica cultivar-group)]
gi|23495719|dbj|BAC19931.1| contains ESTs
AU092606(C52561),AU063213(C53672),C27675(C52561)~unknown
protein [Oryza sativa (japonica cultivar-group)]
Length = 435
Score = 34.7 bits (78), Expect = 0.50
Identities = 16/26 (61%), Positives = 19/26 (72%)
Frame = -3
Query: 465 EAANAKKQRTIQVMDLHELPKPKNKN 388
E NAKKQRTIQ++D LPK N+N
Sbjct: 389 EFDNAKKQRTIQMVDPQNLPKQANRN 414
>gb|AAN73018.1| endothelin-converting enzyme [Locusta migratoria]
Length = 727
Score = 32.0 bits (71), Expect = 3.3
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 293 SGFIRPQYHYYYHYHQCLPLE-PAPPLFFAKKVFLFLGFGNSWRS 424
+G ++ YH Y + Q P E P P L F+ K FL F W S
Sbjct: 629 NGGLKAAYHAYLEWEQRNPRELPLPGLNFSHKQLFFLSFAQVWCS 673
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 429,030,935
Number of Sequences: 1393205
Number of extensions: 9501335
Number of successful extensions: 21485
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21431
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12232797444
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
