Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003482A_C01 KMC003482A_c01
(546 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P46519|LE14_SOYBN Desiccation protectant protein Lea14 homolo... 208 4e-53
gb|AAD25354.1|AF115314_1 seed maturation protein PM22; late embr... 187 7e-47
sp|P46518|LE14_GOSHI Late embryogenesis abundant protein Lea14-A... 182 3e-45
gb|AAL66195.1|AF386513_1 putative desiccation protectant protein... 171 5e-42
gb|AAD53078.1|AF168168_1 water stress-induced ER5 protein [Capsi... 167 8e-41
>sp|P46519|LE14_SOYBN Desiccation protectant protein Lea14 homolog gi|7488659|pir||T06356
desiccation protectant protein homolog - soybean
gi|472850|gb|AAA61564.1| putative desiccation protectant
protein, homolog of Lea14, GenBank Accession Number
M88321
Length = 152
Score = 208 bits (529), Expect = 4e-53
Identities = 100/112 (89%), Positives = 109/112 (97%)
Frame = -3
Query: 544 YLAKISVSNPYSTPIPICEINYTLKSAGREIASGTIPDPGSLKASDTTLLEVPVKVAHSI 365
YLAK+SVSNPYSTPIPICEI Y+LKSAG+EIASGTIPDPGSLKASDTT+L+VPVKV HSI
Sbjct: 41 YLAKVSVSNPYSTPIPICEIKYSLKSAGKEIASGTIPDPGSLKASDTTMLDVPVKVPHSI 100
Query: 364 LLSIAKDIGADWDIDYHLDIGLVIDLPVIGNFTIPLSQKGEIKLPTITDMFA 209
LLS+AKDIGADWDIDY LD+GLVIDLPVIGNFTIPLSQKGEIKLPT++DMFA
Sbjct: 101 LLSLAKDIGADWDIDYQLDLGLVIDLPVIGNFTIPLSQKGEIKLPTLSDMFA 152
>gb|AAD25354.1|AF115314_1 seed maturation protein PM22; late embryogenesis abundant protein;
LEA protein [Glycine max]
Length = 152
Score = 187 bits (475), Expect = 7e-47
Identities = 90/112 (80%), Positives = 102/112 (90%)
Frame = -3
Query: 544 YLAKISVSNPYSTPIPICEINYTLKSAGREIASGTIPDPGSLKASDTTLLEVPVKVAHSI 365
YLAK+SV NPYST IPICEINY+ KSA REIASG IPDPGSLKA DTT+++VPVKV +SI
Sbjct: 41 YLAKVSVRNPYSTSIPICEINYSFKSASREIASGKIPDPGSLKAKDTTMVDVPVKVPYSI 100
Query: 364 LLSIAKDIGADWDIDYHLDIGLVIDLPVIGNFTIPLSQKGEIKLPTITDMFA 209
L+S+AKDIGADWDIDY LD+GLVID+PVIG FTIPLSQKGEIKLPT++ MFA
Sbjct: 101 LMSLAKDIGADWDIDYQLDLGLVIDVPVIGIFTIPLSQKGEIKLPTLSTMFA 152
>sp|P46518|LE14_GOSHI Late embryogenesis abundant protein Lea14-A gi|7484727|pir||T09875
late embryogenesis-abundant protein Lea14-A - upland
cotton gi|167326|gb|AAA18542.1| Group 4 late
embryogenesis-abundant protein gi|167328|gb|AAA18543.1|
Group 4 late embryogenesis-abundant protein
Length = 151
Score = 182 bits (461), Expect = 3e-45
Identities = 85/111 (76%), Positives = 101/111 (90%)
Frame = -3
Query: 544 YLAKISVSNPYSTPIPICEINYTLKSAGREIASGTIPDPGSLKASDTTLLEVPVKVAHSI 365
Y AK+SVSNPYS IPICEI+Y +SAGR IASGTIPDPGSLKASDTT+L+VPVKV ++I
Sbjct: 41 YGAKVSVSNPYSHSIPICEISYNFRSAGRGIASGTIPDPGSLKASDTTMLDVPVKVPYNI 100
Query: 364 LLSIAKDIGADWDIDYHLDIGLVIDLPVIGNFTIPLSQKGEIKLPTITDMF 212
L+S+ KDIGADWDIDY L++GL IDLP++GNFTIPLSQKGEIKLPT++D+F
Sbjct: 101 LVSLVKDIGADWDIDYELELGLTIDLPIVGNFTIPLSQKGEIKLPTLSDIF 151
>gb|AAL66195.1|AF386513_1 putative desiccation protectant protein [Pyrus communis]
Length = 150
Score = 171 bits (433), Expect = 5e-42
Identities = 81/107 (75%), Positives = 94/107 (87%)
Frame = -3
Query: 544 YLAKISVSNPYSTPIPICEINYTLKSAGREIASGTIPDPGSLKASDTTLLEVPVKVAHSI 365
YL+K+SV+NPYS IPIC+I YTLKS REIASGTIPDPGSLKASD T+LEV +KV HSI
Sbjct: 43 YLSKVSVTNPYSHSIPICDIKYTLKSVNREIASGTIPDPGSLKASDITVLEVLLKVPHSI 102
Query: 364 LLSIAKDIGADWDIDYHLDIGLVIDLPVIGNFTIPLSQKGEIKLPTI 224
L+++AKD+GADWD DY LDIGL IDLPVIGNFT PL++KGE KLPT+
Sbjct: 103 LVTLAKDLGADWDFDYELDIGLTIDLPVIGNFTTPLNKKGEFKLPTL 149
>gb|AAD53078.1|AF168168_1 water stress-induced ER5 protein [Capsicum annuum]
Length = 164
Score = 167 bits (423), Expect = 8e-41
Identities = 76/111 (68%), Positives = 96/111 (86%)
Frame = -3
Query: 544 YLAKISVSNPYSTPIPICEINYTLKSAGREIASGTIPDPGSLKASDTTLLEVPVKVAHSI 365
Y A ++V NPYS P+PI +I+Y LK +GR I SGTIPDPG++KA+DTT+L+VPVKV HS+
Sbjct: 41 YHANVAVKNPYSVPVPIMQISYALKCSGRIIVSGTIPDPGNIKANDTTMLDVPVKVPHSV 100
Query: 364 LLSIAKDIGADWDIDYHLDIGLVIDLPVIGNFTIPLSQKGEIKLPTITDMF 212
L+S+AKDIG DWDIDY L++GL IDLPVIGNFTIPLS GEIKLP+I+D++
Sbjct: 101 LVSLAKDIGKDWDIDYTLELGLTIDLPVIGNFTIPLSHSGEIKLPSISDLW 151
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 456,878,917
Number of Sequences: 1393205
Number of extensions: 9796389
Number of successful extensions: 40446
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40417
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18660035355
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
