Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003480A_C01 KMC003480A_c01
(607 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FX85|PE10_ARATH Peroxidase 10 precursor (Atperox P10) (ATP5... 143 2e-33
ref|NP_175380.1| peroxidase, putative; protein id: At1g49570.1 [... 143 2e-33
emb|CAA67341.1| peroxidase; peroxidase ATP5a [Arabidopsis thaliana] 141 6e-33
gb|AAM66044.1| peroxidase [Arabidopsis thaliana] 122 4e-27
ref|NP_196291.1| peroxidase, putative; protein id: At5g06730.1, ... 122 4e-27
>sp|Q9FX85|PE10_ARATH Peroxidase 10 precursor (Atperox P10) (ATP5a)
gi|25285601|pir||C96532 peroxidase ATP5a [imported] -
Arabidopsis thaliana
gi|10120418|gb|AAG13043.1|AC011807_2 peroxidase ATP5a
[Arabidopsis thaliana] gi|26453254|dbj|BAC43700.1|
putative peroxidase [Arabidopsis thaliana]
Length = 350
Score = 143 bits (360), Expect = 2e-33
Identities = 73/128 (57%), Positives = 90/128 (70%), Gaps = 2/128 (1%)
Frame = -3
Query: 605 FAQCFTFKPRLFDFGGSGKPDP--ALGSSLLQNLQKLCPNQEASDTNLVPLDSVTTSTFD 432
FAQCF K RLF+F GSG+PDP A S+LL L+ CPN ++SD+ L LD+ ++ FD
Sbjct: 219 FAQCFVIKHRLFNFKGSGQPDPNLAASSALLSKLKDTCPNVDSSDSKLAALDAASSVKFD 278
Query: 431 NMYYRNLVNNSGLLQSDQALLGDNTTASLVANYSKWPVLFFRDFAVSIEKMGRIGVLTGQ 252
N YY NL+NN GLL SDQ L+ D T A+LV +YS+ P LF RDFAVS+ KMG IGV+TG
Sbjct: 279 NAYYVNLMNNIGLLDSDQTLMTDPTAAALVKSYSENPYLFSRDFAVSMVKMGNIGVMTGS 338
Query: 251 QGQIRKNC 228
G IR C
Sbjct: 339 DGVIRGKC 346
>ref|NP_175380.1| peroxidase, putative; protein id: At1g49570.1 [Arabidopsis
thaliana]
Length = 346
Score = 143 bits (360), Expect = 2e-33
Identities = 73/128 (57%), Positives = 90/128 (70%), Gaps = 2/128 (1%)
Frame = -3
Query: 605 FAQCFTFKPRLFDFGGSGKPDP--ALGSSLLQNLQKLCPNQEASDTNLVPLDSVTTSTFD 432
FAQCF K RLF+F GSG+PDP A S+LL L+ CPN ++SD+ L LD+ ++ FD
Sbjct: 215 FAQCFVIKHRLFNFKGSGQPDPNLAASSALLSKLKDTCPNVDSSDSKLAALDAASSVKFD 274
Query: 431 NMYYRNLVNNSGLLQSDQALLGDNTTASLVANYSKWPVLFFRDFAVSIEKMGRIGVLTGQ 252
N YY NL+NN GLL SDQ L+ D T A+LV +YS+ P LF RDFAVS+ KMG IGV+TG
Sbjct: 275 NAYYVNLMNNIGLLDSDQTLMTDPTAAALVKSYSENPYLFSRDFAVSMVKMGNIGVMTGS 334
Query: 251 QGQIRKNC 228
G IR C
Sbjct: 335 DGVIRGKC 342
>emb|CAA67341.1| peroxidase; peroxidase ATP5a [Arabidopsis thaliana]
Length = 350
Score = 141 bits (356), Expect = 6e-33
Identities = 73/128 (57%), Positives = 89/128 (69%), Gaps = 2/128 (1%)
Frame = -3
Query: 605 FAQCFTFKPRLFDFGGSGKPDP--ALGSSLLQNLQKLCPNQEASDTNLVPLDSVTTSTFD 432
FAQCF K RLF+F GSG+PDP A S+LL L+ CPN ++SD+ L LD+ ++ FD
Sbjct: 219 FAQCFVIKHRLFNFKGSGQPDPNLAASSALLSKLKDTCPNVDSSDSKLAALDAASSVKFD 278
Query: 431 NMYYRNLVNNSGLLQSDQALLGDNTTASLVANYSKWPVLFFRDFAVSIEKMGRIGVLTGQ 252
N YY NL+NN GLL SDQ L+ D T A+LV +YS+ P LF RDFAVS+ KMG IGV TG
Sbjct: 279 NAYYVNLMNNIGLLDSDQTLMTDPTAAALVKSYSENPYLFSRDFAVSMVKMGNIGVQTGS 338
Query: 251 QGQIRKNC 228
G IR C
Sbjct: 339 DGVIRGKC 346
>gb|AAM66044.1| peroxidase [Arabidopsis thaliana]
Length = 358
Score = 122 bits (306), Expect = 4e-27
Identities = 63/130 (48%), Positives = 84/130 (64%), Gaps = 2/130 (1%)
Frame = -3
Query: 599 QCFTFKPRLFDFGGSGKPDPALGSSLLQNLQKLCPNQEASDTNLVPLDSVTTSTFDNMYY 420
QC TF RLF+F G+G PDP L S+LL +LQ+LCP Q S+T + LD T FDN Y+
Sbjct: 206 QCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCP-QNGSNTGITNLDLSTPDAFDNNYF 264
Query: 419 RNLVNNSGLLQSDQALLGD--NTTASLVANYSKWPVLFFRDFAVSIEKMGRIGVLTGQQG 246
NL +N+GLLQSDQ L + + T +V +++ LFF F S+ KMG I LTG G
Sbjct: 265 TNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTLFFEAFVQSMIKMGNISPLTGSSG 324
Query: 245 QIRKNCRAVN 216
+IR++C+ VN
Sbjct: 325 EIRQDCKVVN 334
>ref|NP_196291.1| peroxidase, putative; protein id: At5g06730.1, supported by cDNA:
7360. [Arabidopsis thaliana]
gi|26397784|sp|Q9FG34|PE54_ARATH Peroxidase 54 precursor
(Atperox P54) (ATP29a) gi|9759301|dbj|BAB09807.1|
peroxidase [Arabidopsis thaliana]
gi|26452668|dbj|BAC43417.1| putative peroxidase
[Arabidopsis thaliana]
Length = 358
Score = 122 bits (306), Expect = 4e-27
Identities = 63/130 (48%), Positives = 84/130 (64%), Gaps = 2/130 (1%)
Frame = -3
Query: 599 QCFTFKPRLFDFGGSGKPDPALGSSLLQNLQKLCPNQEASDTNLVPLDSVTTSTFDNMYY 420
QC TF RLF+F G+G PDP L S+LL +LQ+LCP Q S+T + LD T FDN Y+
Sbjct: 206 QCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCP-QNGSNTGITNLDLSTPDAFDNNYF 264
Query: 419 RNLVNNSGLLQSDQALLGD--NTTASLVANYSKWPVLFFRDFAVSIEKMGRIGVLTGQQG 246
NL +N+GLLQSDQ L + + T +V +++ LFF F S+ KMG I LTG G
Sbjct: 265 TNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTLFFEAFVQSMIKMGNISPLTGSSG 324
Query: 245 QIRKNCRAVN 216
+IR++C+ VN
Sbjct: 325 EIRQDCKVVN 334
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 486,235,095
Number of Sequences: 1393205
Number of extensions: 9818330
Number of successful extensions: 27682
Number of sequences better than 10.0: 479
Number of HSP's better than 10.0 without gapping: 26512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27274
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
