>KMC003478A_C01 KMC003478A_c01
aacaaaacttacttctacatacattagaaataaaTATCAATTATTAATAATTACAAGGAA
AGGGGAAAAGAAAGAAGGGAAAAACCTGAACACGCCTGCCTATCGTACATACAGATCAAT
GAATAACCATGGCTGTGTTGGTTCCTGTACCATGATTTATTCTATCCAGGTTCATGTTCA
TGTTGATCCATCTCTAGGGTCTAGCAAAAACACCCCAAATCTTACCACGACCAAGGCTTT
CCAAGAGTTTCTGGGACCCGGGGACATCCATTTCCACAAGCTTCTGCATATGTACACCAG
CCCCCGCTGCAACCATTGGCTTCCTGCAACTCTGGGAGTGCACGAGCGAGAGTAGCAGCG
AAACAGGGTACTTCTTATCCAGATTCTGCAACGACGGGTCCAAGAGATGTACCGCACTC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC003478A_C01 KMC003478A_c01
         (419 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_199903.1| putative protein; protein id: At5g50900.1, supp...    93  9e-19
gb|AAK64166.1| unknown protein [Arabidopsis thaliana]                  93  9e-19
gb|AAM92297.1| putative arm repeat containing protein [Oryza sat...    72  2e-12
ref|NP_182096.1| unknown protein; protein id: At2g45720.1 [Arabi...    67  5e-11
ref|NP_563637.1| expressed protein; protein id: At1g01830.1, sup...    56  9e-08

>ref|NP_199903.1| putative protein; protein id: At5g50900.1, supported by cDNA:
           gi_14532769 [Arabidopsis thaliana]
           gi|9758237|dbj|BAB08736.1|
           gene_id:K3K7.4~pir||T02475~similar to unknown protein
           [Arabidopsis thaliana]
          Length = 555

 Score = 92.8 bits (229), Expect = 9e-19
 Identities = 45/74 (60%), Positives = 56/74 (74%)
 Frame = -2

Query: 418 SAVHLLDPSLQNLDKKYPVSLLLSLVHSQSCRKPMVAAGAGVHMQKLVEMDVPGSQKLLE 239
           S V LLDP ++ LDK+Y VS L  LV S+ CRK +VAAGA +H+QKLV+MD  G++KL E
Sbjct: 482 SLVQLLDPKIKKLDKRYTVSALELLVTSKKCRKQVVAAGACLHLQKLVDMDTEGAKKLAE 541

Query: 238 SLGRGKIWGVFARP 197
           +L R KIWGVF RP
Sbjct: 542 NLSRSKIWGVFTRP 555

>gb|AAK64166.1| unknown protein [Arabidopsis thaliana]
          Length = 555

 Score = 92.8 bits (229), Expect = 9e-19
 Identities = 45/74 (60%), Positives = 56/74 (74%)
 Frame = -2

Query: 418 SAVHLLDPSLQNLDKKYPVSLLLSLVHSQSCRKPMVAAGAGVHMQKLVEMDVPGSQKLLE 239
           S V LLDP ++ LDK+Y VS L  LV S+ CRK +VAAGA +H+QKLV+MD  G++KL E
Sbjct: 482 SLVQLLDPKIKKLDKRYTVSALELLVTSKKCRKQVVAAGACLHLQKLVDMDTEGAKKLAE 541

Query: 238 SLGRGKIWGVFARP 197
           +L R KIWGVF RP
Sbjct: 542 NLSRSKIWGVFTRP 555

>gb|AAM92297.1| putative arm repeat containing protein [Oryza sativa (japonica
           cultivar-group)] gi|27311271|gb|AAO00697.1| putative
           armadillo repeat containing protein [Oryza sativa
           (japonica cultivar-group)]
          Length = 575

 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 37/71 (52%), Positives = 52/71 (73%)
 Frame = -2

Query: 412 VHLLDPSLQNLDKKYPVSLLLSLVHSQSCRKPMVAAGAGVHMQKLVEMDVPGSQKLLESL 233
           V LL+PS QN  KKY +S LL+L  S+ C+K M++ GA  +++KL EMDV G++KLLE L
Sbjct: 504 VQLLEPSPQNTAKKYAISCLLTLSASKRCKKLMISHGAIGYLKKLSEMDVAGAKKLLEKL 563

Query: 232 GRGKIWGVFAR 200
            RGK+  +F+R
Sbjct: 564 ERGKLRNLFSR 574

>ref|NP_182096.1| unknown protein; protein id: At2g45720.1 [Arabidopsis thaliana]
           gi|7485635|pir||T02475 hypothetical protein At2g45720
           [imported] - Arabidopsis thaliana
           gi|3386623|gb|AAC28553.1| unknown protein [Arabidopsis
           thaliana] gi|20197052|gb|AAM14897.1| unknown protein
           [Arabidopsis thaliana]
          Length = 553

 Score = 67.0 bits (162), Expect = 5e-11
 Identities = 36/73 (49%), Positives = 51/73 (69%)
 Frame = -2

Query: 418 SAVHLLDPSLQNLDKKYPVSLLLSLVHSQSCRKPMVAAGAGVHMQKLVEMDVPGSQKLLE 239
           S V LL+PS  N  KKY VS L +L  S+ C+K MV+ GA  +++KL E++VPGS+KLLE
Sbjct: 480 SLVMLLEPSPGNSAKKYAVSGLAALCSSRKCKKLMVSHGAVGYLKKLSELEVPGSKKLLE 539

Query: 238 SLGRGKIWGVFAR 200
            + +GK+   F+R
Sbjct: 540 RIEKGKLKSFFSR 552

>ref|NP_563637.1| expressed protein; protein id: At1g01830.1, supported by cDNA:
           gi_16604588, supported by cDNA: gi_20258992 [Arabidopsis
           thaliana] gi|16604589|gb|AAL24151.1| unknown protein
           [Arabidopsis thaliana] gi|20258993|gb|AAM14212.1|
           unknown protein [Arabidopsis thaliana]
          Length = 574

 Score = 56.2 bits (134), Expect = 9e-08
 Identities = 33/71 (46%), Positives = 45/71 (62%)
 Frame = -2

Query: 412 VHLLDPSLQNLDKKYPVSLLLSLVHSQSCRKPMVAAGAGVHMQKLVEMDVPGSQKLLESL 233
           V LLD +  N  KKY V+ LL +  S+  +K MV+ GA  +++KL EM+V G+ KLLE L
Sbjct: 504 VMLLDSNPGNTAKKYAVAGLLGMSGSEKSKKMMVSYGAIGYLKKLSEMEVMGADKLLEKL 563

Query: 232 GRGKIWGVFAR 200
            RGK+   F R
Sbjct: 564 ERGKLRSFFHR 574

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 416,445,990
Number of Sequences: 1393205
Number of extensions: 9976750
Number of successful extensions: 27708
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 26688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27696
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 6923296128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 GNf044b09 BP070586 1 403 2 GNf080e10 BP073280 35 419

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