Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003475A_C01 KMC003475A_c01
(525 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177021.1| putative reductase; protein id: At1g68540.1 [Ar... 202 1e-51
ref|NP_173917.1| dihydroflavonol 4-reductase, putative; protein ... 189 2e-47
dbj|BAB18290.1| putative reductase [Oryza sativa (japonica culti... 172 3e-42
emb|CAC07424.1| cinnamoyl-CoA reductase [Populus balsamifera sub... 91 6e-18
emb|CAA12276.1| cinnamoyl CoA reductase [Populus balsamifera sub... 91 6e-18
>ref|NP_177021.1| putative reductase; protein id: At1g68540.1 [Arabidopsis thaliana]
gi|25404750|pir||F96709 probable reductase T26J14.11
[imported] - Arabidopsis thaliana
gi|12324882|gb|AAG52392.1|AC011915_6 putative reductase;
61412-62628 [Arabidopsis thaliana]
Length = 321
Score = 202 bits (515), Expect = 1e-51
Identities = 94/130 (72%), Positives = 113/130 (86%)
Frame = -3
Query: 523 GPLLAPQPTSTLLMILSIIKGLKGEYPNTTVGFVHIHDVVGAHLLAMEEPKASGRLVCSS 344
GPLL P+PTSTLLMIL+I KGL GEYPN TVGFVHI DVV AH+LAMEEPKASGR++CSS
Sbjct: 192 GPLLGPKPTSTLLMILAIAKGLAGEYPNFTVGFVHIDDVVAAHVLAMEEPKASGRIICSS 251
Query: 343 TVAHWSQIIEMLQSQYPFYPYEKKCGSQEGDNNTHSMDTTKITALGFPAFKSLEQMFDDC 164
+VAHWS+IIE+++++YP YP+E KC ++EGDN+ HSMDT KI LGF +FKSL +MFDDC
Sbjct: 252 SVAHWSEIIELMRNKYPNYPFENKCSNKEGDNSPHSMDTRKIHELGFGSFKSLPEMFDDC 311
Query: 163 IKSFQEKGFL 134
I SFQ+KG L
Sbjct: 312 IISFQKKGLL 321
>ref|NP_173917.1| dihydroflavonol 4-reductase, putative; protein id: At1g25460.1
[Arabidopsis thaliana] gi|25403022|pir||G86384 probable
dihydroflavonol 4-reductase [imported] - Arabidopsis
thaliana gi|12321516|gb|AAG50819.1|AC079281_21
dihydroflavonol 4-reductase, putative [Arabidopsis
thaliana]
Length = 320
Score = 189 bits (480), Expect = 2e-47
Identities = 88/130 (67%), Positives = 108/130 (82%)
Frame = -3
Query: 523 GPLLAPQPTSTLLMILSIIKGLKGEYPNTTVGFVHIHDVVGAHLLAMEEPKASGRLVCSS 344
GP+L+P+PTS+ L+ LSIIKG +G YPN GFVHI DVV A +LAMEEPKASGR++CSS
Sbjct: 191 GPILSPKPTSSPLIFLSIIKGTRGTYPNFRGGFVHIDDVVAAQILAMEEPKASGRILCSS 250
Query: 343 TVAHWSQIIEMLQSQYPFYPYEKKCGSQEGDNNTHSMDTTKITALGFPAFKSLEQMFDDC 164
+VAHWS+IIEML+ +YP YP+E KCGS+EG + HS+DTTKI LGF +FKSL +MFDDC
Sbjct: 251 SVAHWSEIIEMLRIKYPLYPFETKCGSEEGKDMPHSLDTTKIHELGFASFKSLTEMFDDC 310
Query: 163 IKSFQEKGFL 134
IK FQ+KG L
Sbjct: 311 IKCFQDKGLL 320
>dbj|BAB18290.1| putative reductase [Oryza sativa (japonica cultivar-group)]
Length = 337
Score = 172 bits (435), Expect = 3e-42
Identities = 77/130 (59%), Positives = 101/130 (77%)
Frame = -3
Query: 523 GPLLAPQPTSTLLMILSIIKGLKGEYPNTTVGFVHIHDVVGAHLLAMEEPKASGRLVCSS 344
GP+L+ PTST L++L++++G YPNTTVGFVH+ D V AH++AME+ +ASGRL+CS
Sbjct: 204 GPILSQAPTSTALIVLALLRGELPRYPNTTVGFVHVDDAVLAHVVAMEDARASGRLICSC 263
Query: 343 TVAHWSQIIEMLQSQYPFYPYEKKCGSQEGDNNTHSMDTTKITALGFPAFKSLEQMFDDC 164
VAHWS+I+ L+ +YP YP +CGS +GD+ H MDT KI ALGFP F S++QMFDDC
Sbjct: 264 HVAHWSEIVGSLRERYPGYPIPAECGSHKGDDRAHKMDTAKIRALGFPPFLSVQQMFDDC 323
Query: 163 IKSFQEKGFL 134
IKSFQ+KG L
Sbjct: 324 IKSFQDKGLL 333
>emb|CAC07424.1| cinnamoyl-CoA reductase [Populus balsamifera subsp. trichocarpa]
Length = 338
Score = 91.3 bits (225), Expect = 6e-18
Identities = 47/131 (35%), Positives = 70/131 (52%), Gaps = 1/131 (0%)
Frame = -3
Query: 523 GPLLAPQPTSTLLMILSIIKGLKGEYPNTTVGFVHIHDVVGAHLLAMEEPKASGRLVCSS 344
GPLL P +++ IL + G Y N+ +VH+ DV AH+L E P ASGR +CS
Sbjct: 195 GPLLQPTVNASITHILKYLTGSAKTYANSVQAYVHVRDVALAHILVFETPSASGRYLCSE 254
Query: 343 TVAHWSQIIEMLQSQYPFYPYEKKCGSQEGD-NNTHSMDTTKITALGFPAFKSLEQMFDD 167
+V H +++E+L +P YP KC ++ + K+ LGF F ++Q +
Sbjct: 255 SVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKQPYKFSNQKLRDLGF-EFTPVKQCLYE 313
Query: 166 CIKSFQEKGFL 134
+KS QEKG L
Sbjct: 314 TVKSLQEKGHL 324
>emb|CAA12276.1| cinnamoyl CoA reductase [Populus balsamifera subsp. trichocarpa]
Length = 338
Score = 91.3 bits (225), Expect = 6e-18
Identities = 47/131 (35%), Positives = 70/131 (52%), Gaps = 1/131 (0%)
Frame = -3
Query: 523 GPLLAPQPTSTLLMILSIIKGLKGEYPNTTVGFVHIHDVVGAHLLAMEEPKASGRLVCSS 344
GPLL P +++ IL + G Y N+ +VH+ DV AH+L E P ASGR +CS
Sbjct: 195 GPLLQPTVNASITHILKYLTGSAKTYANSVQAYVHVRDVALAHILVFETPSASGRYLCSE 254
Query: 343 TVAHWSQIIEMLQSQYPFYPYEKKCGSQEGD-NNTHSMDTTKITALGFPAFKSLEQMFDD 167
+V H +++E+L +P YP KC ++ + K+ LGF F ++Q +
Sbjct: 255 SVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKQPYKFSNQKLRDLGF-EFTPVKQCLYE 313
Query: 166 CIKSFQEKGFL 134
+KS QEKG L
Sbjct: 314 TVKSLQEKGHL 324
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 474,696,975
Number of Sequences: 1393205
Number of extensions: 10095361
Number of successful extensions: 27029
Number of sequences better than 10.0: 182
Number of HSP's better than 10.0 without gapping: 26354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26974
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17019769648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
