Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003463A_C01 KMC003463A_c01
(658 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC16575.1| p23 co-chaperone [Arabidopsis thaliana] 92 8e-18
gb|AAM83226.1| AT4g02450/T14P8_5 [Arabidopsis thaliana] gi|23308... 89 5e-17
gb|EAA18516.1| 34 kDa phosphoprotein [Plasmodium yoelii yoelii] 88 9e-17
gb|AAC14463.2| 34 kDa phosphoprotein [Plasmodium berghei] 85 1e-15
gb|AAB60233.1| GGM tandem repeat protein [Plasmodium falciparum] 82 6e-15
>emb|CAC16575.1| p23 co-chaperone [Arabidopsis thaliana]
Length = 241
Score = 91.7 bits (226), Expect = 8e-18
Identities = 61/127 (48%), Positives = 70/127 (55%), Gaps = 23/127 (18%)
Frame = -2
Query: 654 GGMDFSKFGGMGMGGDGGLGGLGGMGGMGGMGGMGGLGGMEGLGGMDFSK-FGGMGD--- 487
G D G GMGG GG+GG+GGMGGMGGMGGMGG+GGME GMDFSK GGMG
Sbjct: 117 GAADMDMAGMEGMGGMGGMGGMGGMGGMGGMGGMGGMGGME---GMDFSKLMGGMGGMGG 173
Query: 486 -------------------DAMDDFEGSDDEEQEVSKPGEASKPAEQEAVKSASEATTEK 364
M++FE SDDEE E +K G+ + +AVK A TEK
Sbjct: 174 LEGLGGMGGMGGMGGMGGMGGMEEFEDSDDEE-ETAKSGD----KKDDAVKEEGPA-TEK 227
Query: 363 AEAAPST 343
A AA T
Sbjct: 228 APAAEET 234
>gb|AAM83226.1| AT4g02450/T14P8_5 [Arabidopsis thaliana] gi|23308253|gb|AAN18096.1|
At4g02450/T14P8_5 [Arabidopsis thaliana]
Length = 241
Score = 89.0 bits (219), Expect = 5e-17
Identities = 59/124 (47%), Positives = 69/124 (55%), Gaps = 20/124 (16%)
Frame = -2
Query: 654 GGMDFSKFGGMGMGGDGGLGGLGGMGGM------------------GGMGGMGGLGGMEG 529
G D G GMGG GG+GG+GGMGGM GGMGGMGG+GG+EG
Sbjct: 117 GAADMDMAGMEGMGGMGGMGGMGGMGGMGGMGGMGGMEGMDFSKLMGGMGGMGGMGGLEG 176
Query: 528 LGGM-DFSKFGGMGD-DAMDDFEGSDDEEQEVSKPGEASKPAEQEAVKSASEATTEKAEA 355
LGGM GGMG M++FE SDDEE E +K G+ + +AVK A TEKA A
Sbjct: 177 LGGMGGMGGMGGMGGMGGMEEFEDSDDEE-ETAKSGD----KKDDAVKEEGLA-TEKAPA 230
Query: 354 APST 343
A T
Sbjct: 231 AEET 234
>gb|EAA18516.1| 34 kDa phosphoprotein [Plasmodium yoelii yoelii]
Length = 256
Score = 88.2 bits (217), Expect = 9e-17
Identities = 48/106 (45%), Positives = 67/106 (62%), Gaps = 5/106 (4%)
Frame = -2
Query: 657 MGGM-DFSKFGGMGMGGDGGLGGLGGMGGMGGMGGMGGLGGMEGLGGMDFSKFGGMGDDA 481
MGG+ D S+FGGMG G GG+GG+GG+GGMGGMGG+GG+GGM G+G +DFSK G MG D
Sbjct: 123 MGGLPDMSQFGGMG--GMGGMGGMGGLGGMGGMGGLGGMGGMGGMGDIDFSKLGNMGGD- 179
Query: 480 MDDFEGSDDEEQEVSKPG----EASKPAEQEAVKSASEATTEKAEA 355
M + G +Q + P ++S + + + T K++A
Sbjct: 180 MSNLAGLGGMDQFKNMPNMNDDDSSSYGDDSSDDDDEDDDTNKSDA 225
>gb|AAC14463.2| 34 kDa phosphoprotein [Plasmodium berghei]
Length = 145
Score = 84.7 bits (208), Expect = 1e-15
Identities = 47/106 (44%), Positives = 65/106 (60%), Gaps = 5/106 (4%)
Frame = -2
Query: 657 MGGM-DFSKFGGMGMGGDGGLGGLGGMGGMGGMGGMGGLGGMEGLGGMDFSKFGGMGDDA 481
MGG+ D S+FGGMG G+GG+GGMGGMGG+GGMGG+GGM G+G +DFSK G MG D
Sbjct: 15 MGGLPDMSQFGGMG-----GMGGMGGMGGMGGLGGMGGMGGMGGMGDIDFSKLGNMGGD- 68
Query: 480 MDDFEGSDDEEQEVSKPG----EASKPAEQEAVKSASEATTEKAEA 355
M + G +Q + P ++S + + + T K++A
Sbjct: 69 MSNLAGLGGMDQFKNMPNMNDDDSSSYGDDSSDDDDEDDDTNKSDA 114
>gb|AAB60233.1| GGM tandem repeat protein [Plasmodium falciparum]
Length = 195
Score = 82.0 bits (201), Expect = 6e-15
Identities = 43/78 (55%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Frame = -2
Query: 657 MGGM-DFSKFGGMG-MGGDGGLGGLGGMGGMGGMGGMGGLGGMEGLGGMDFSKFGGMGDD 484
MGGM D S+FG MG +G GGLG +GG+G MGG+G MGGLG M G+G +DFSK G MG D
Sbjct: 57 MGGMPDMSQFGNMGGLGNMGGLGNMGGLGNMGGLGNMGGLGNMGGMGDLDFSKLGNMGGD 116
Query: 483 AMDDFEGSDDEEQEVSKP 430
M +F G +Q + P
Sbjct: 117 -MPNFAGLGGMDQFKNMP 133
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 644,697,378
Number of Sequences: 1393205
Number of extensions: 17829582
Number of successful extensions: 507649
Number of sequences better than 10.0: 10095
Number of HSP's better than 10.0 without gapping: 115770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279950
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28006887348
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
