Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003437A_C01 KMC003437A_c01
(665 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T51415 Carboxylesterase-like protein - Arabidopsis thaliana... 195 4e-49
ref|NP_197090.2| Carboxylesterase-like protein; protein id: At5g... 195 4e-49
ref|NP_186890.1| hypothetical protein; protein id: At3g02410.1 [... 188 6e-47
ref|NP_173937.2| hypothetical protein; protein id: At1g26120.1, ... 163 2e-39
pir||C86387 hypothetical protein F28B23.20 [imported] - Arabidop... 163 2e-39
>pir||T51415 Carboxylesterase-like protein - Arabidopsis thaliana
gi|9755631|emb|CAC01785.1| Carboxylesterase-like protein
[Arabidopsis thaliana]
Length = 419
Score = 195 bits (496), Expect = 4e-49
Identities = 90/134 (67%), Positives = 112/134 (83%)
Frame = -2
Query: 664 FLSIMEGEESLKEFSPEIKIQDPCIKDSIPLLPPIILFHGTGDYSIPSIASERFADALKK 485
FLSIMEGEES ++FSPE++++DP + + LLPPIILFHG+ DYSIP S+ F DAL+
Sbjct: 286 FLSIMEGEESFEKFSPEVRLKDPVVGKAASLLPPIILFHGSSDYSIPCDESKTFTDALQA 345
Query: 484 AGARADLILYDGKTHTDLFLQDPLRGGKDDLFDHVVAFVHANDNDALAKDATAPPRRRFV 305
GA+A+L+LY GKTHTDLFLQDPLRGGKD+LFD +V+ +HA DND L KD+ APPR+R V
Sbjct: 346 VGAKAELVLYSGKTHTDLFLQDPLRGGKDELFDDIVSVIHAEDNDGLTKDSLAPPRKRLV 405
Query: 304 PEILLKLARKISPF 263
PE+LLKLAR+ISPF
Sbjct: 406 PELLLKLAREISPF 419
>ref|NP_197090.2| Carboxylesterase-like protein; protein id: At5g15860.1, supported
by cDNA: gi_15027944, supported by cDNA: gi_20259180
[Arabidopsis thaliana] gi|15027945|gb|AAK76503.1|
putative Carboxylesterase [Arabidopsis thaliana]
gi|20259181|gb|AAM14306.1| putative carboxylesterase
[Arabidopsis thaliana]
Length = 427
Score = 195 bits (496), Expect = 4e-49
Identities = 90/134 (67%), Positives = 112/134 (83%)
Frame = -2
Query: 664 FLSIMEGEESLKEFSPEIKIQDPCIKDSIPLLPPIILFHGTGDYSIPSIASERFADALKK 485
FLSIMEGEES ++FSPE++++DP + + LLPPIILFHG+ DYSIP S+ F DAL+
Sbjct: 294 FLSIMEGEESFEKFSPEVRLKDPVVGKAASLLPPIILFHGSSDYSIPCDESKTFTDALQA 353
Query: 484 AGARADLILYDGKTHTDLFLQDPLRGGKDDLFDHVVAFVHANDNDALAKDATAPPRRRFV 305
GA+A+L+LY GKTHTDLFLQDPLRGGKD+LFD +V+ +HA DND L KD+ APPR+R V
Sbjct: 354 VGAKAELVLYSGKTHTDLFLQDPLRGGKDELFDDIVSVIHAEDNDGLTKDSLAPPRKRLV 413
Query: 304 PEILLKLARKISPF 263
PE+LLKLAR+ISPF
Sbjct: 414 PELLLKLAREISPF 427
>ref|NP_186890.1| hypothetical protein; protein id: At3g02410.1 [Arabidopsis
thaliana] gi|6957704|gb|AAF32448.1| hypothetical protein
[Arabidopsis thaliana]
Length = 373
Score = 188 bits (477), Expect = 6e-47
Identities = 87/134 (64%), Positives = 111/134 (81%)
Frame = -2
Query: 664 FLSIMEGEESLKEFSPEIKIQDPCIKDSIPLLPPIILFHGTGDYSIPSIASERFADALKK 485
FLSIMEGEES K+FSPE++++D ++ + LLP IILFHG+ DYSIP AS+ F DAL+
Sbjct: 240 FLSIMEGEESFKQFSPEVRLKDLNVRKAAALLPHIILFHGSADYSIPPEASKTFTDALQA 299
Query: 484 AGARADLILYDGKTHTDLFLQDPLRGGKDDLFDHVVAFVHANDNDALAKDATAPPRRRFV 305
A +A+L++Y GKTHTDLFLQDPLRGGKD+LFDH+V+ +HA+D+DAL DA APPR+R V
Sbjct: 300 AEVKAELVMYKGKTHTDLFLQDPLRGGKDELFDHIVSMIHADDSDALRNDAVAPPRKRLV 359
Query: 304 PEILLKLARKISPF 263
PE LLKLA ++SPF
Sbjct: 360 PEFLLKLAGRVSPF 373
>ref|NP_173937.2| hypothetical protein; protein id: At1g26120.1, supported by cDNA:
gi_17979291, supported by cDNA: gi_20259110 [Arabidopsis
thaliana] gi|17979292|gb|AAL49871.1| unknown protein
[Arabidopsis thaliana] gi|20259111|gb|AAM14271.1|
unknown protein [Arabidopsis thaliana]
Length = 476
Score = 163 bits (413), Expect = 2e-39
Identities = 80/134 (59%), Positives = 103/134 (76%)
Frame = -2
Query: 664 FLSIMEGEESLKEFSPEIKIQDPCIKDSIPLLPPIILFHGTGDYSIPSIASERFADALKK 485
FLSIMEGEESL++FSPE+ +Q+P +K I LPP ILFHGT DYSIPS AS+ FA+ L++
Sbjct: 346 FLSIMEGEESLRQFSPELVVQNPNLKHIIARLPPFILFHGTDDYSIPSDASKSFAETLQR 405
Query: 484 AGARADLILYDGKTHTDLFLQDPLRGGKDDLFDHVVAFVHANDNDALAKDATAPPRRRFV 305
GA+A +ILY+GKTHTDLFLQDP+RGG D++F+ +V V +D +A+ K RRR V
Sbjct: 406 LGAKAKVILYEGKTHTDLFLQDPMRGGIDEMFEDIVTVVLGDDQEAIGKSV---DRRRLV 462
Query: 304 PEILLKLARKISPF 263
PE +LKLA +SPF
Sbjct: 463 PEFMLKLAHWVSPF 476
>pir||C86387 hypothetical protein F28B23.20 [imported] - Arabidopsis thaliana
gi|12320750|gb|AAG50528.1|AC084221_10 hypothetical
protein [Arabidopsis thaliana]
gi|12321166|gb|AAG50668.1|AC079829_1 hypothetical
protein [Arabidopsis thaliana]
Length = 472
Score = 163 bits (413), Expect = 2e-39
Identities = 80/134 (59%), Positives = 103/134 (76%)
Frame = -2
Query: 664 FLSIMEGEESLKEFSPEIKIQDPCIKDSIPLLPPIILFHGTGDYSIPSIASERFADALKK 485
FLSIMEGEESL++FSPE+ +Q+P +K I LPP ILFHGT DYSIPS AS+ FA+ L++
Sbjct: 342 FLSIMEGEESLRQFSPELVVQNPNLKHIIARLPPFILFHGTDDYSIPSDASKSFAETLQR 401
Query: 484 AGARADLILYDGKTHTDLFLQDPLRGGKDDLFDHVVAFVHANDNDALAKDATAPPRRRFV 305
GA+A +ILY+GKTHTDLFLQDP+RGG D++F+ +V V +D +A+ K RRR V
Sbjct: 402 LGAKAKVILYEGKTHTDLFLQDPMRGGIDEMFEDIVTVVLGDDQEAIGKSV---DRRRLV 458
Query: 304 PEILLKLARKISPF 263
PE +LKLA +SPF
Sbjct: 459 PEFMLKLAHWVSPF 472
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 551,180,502
Number of Sequences: 1393205
Number of extensions: 11901136
Number of successful extensions: 34409
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 32818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34256
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28855580904
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
