Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003431A_C01 KMC003431A_c01
(589 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA22789.1| hypothetical protein [Plasmodium yoelii yoelii] 36 0.31
gb|EAA28571.1| hypothetical protein [Neurospora crassa] 34 1.6
ref|NP_705364.1| hypothetical protein [Plasmodium falciparum 3D7... 33 2.0
ref|NP_720056.1| serine protease, subtilase family [Shewanella o... 33 2.7
gb|EAA21395.1| dentin phosphoryn [Plasmodium yoelii yoelii] 32 4.5
>gb|EAA22789.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 1652
Score = 36.2 bits (82), Expect = 0.31
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = +3
Query: 99 EATIFNAIHVYGE---YEANLYIHNNNNNEITGNMGV 200
+ TI N ++YGE Y +NL HNNNNN TGN+G+
Sbjct: 197 DCTINNQNNIYGEINNYNSNL--HNNNNNINTGNIGI 231
>gb|EAA28571.1| hypothetical protein [Neurospora crassa]
Length = 1788
Score = 33.9 bits (76), Expect = 1.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 265 ETISVVDEFKARSPFSARSFWDSRTMPFWNSALGNWLDLDILHCFLHQLL 414
E ++V+ F P AR W S + N+A+ NWLD D +H +L
Sbjct: 611 ELVTVLGSFYETKPSKARRVWGSEGLYAKNAAV-NWLDFDATKSLIHSVL 659
>ref|NP_705364.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23615609|emb|CAD52601.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 1847
Score = 33.5 bits (75), Expect = 2.0
Identities = 24/67 (35%), Positives = 36/67 (52%)
Frame = +3
Query: 78 NSNNSI*EATIFNAIHVYGEYEANLYIHNNNNNEITGNMGVLCIHK*MLFRYRNLYSNSN 257
N+NN+I + T N +H EY +N +NNNNN MG I K + ++Y N N
Sbjct: 693 NNNNNIMDIT--NILHFNNEYISNKIDNNNNNNI---KMGSNIIDKNLNIE-SDIYDNKN 746
Query: 258 LI*NNLS 278
+I + +S
Sbjct: 747 IINSKIS 753
>ref|NP_720056.1| serine protease, subtilase family [Shewanella oneidensis MR-1]
gi|24351017|gb|AAN57500.1|AE015886_1 serine protease,
subtilase family [Shewanella oneidensis MR-1]
Length = 1634
Score = 33.1 bits (74), Expect = 2.7
Identities = 24/83 (28%), Positives = 38/83 (44%)
Frame = -1
Query: 589 PRVKQQLNDSTKAKIKGYKDVISKKQNXKSQAKLQPQETATNKTERDSTSKVSETDQGAK 410
P Q L D+ KA +D+ + Q L+ + A+N +R T SETD+ +
Sbjct: 1158 PEGLQLLPDTLKANSNN-QDLKAGLTVAAQQITLKAMQQASNAQKRQYTFTTSETDESCR 1216
Query: 409 AGVGSNEECQDLASYPMLNSKMA 341
+GSN DL + + S+ A
Sbjct: 1217 IPIGSNPYYLDLFTEAGIESETA 1239
>gb|EAA21395.1| dentin phosphoryn [Plasmodium yoelii yoelii]
Length = 721
Score = 32.3 bits (72), Expect = 4.5
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = -1
Query: 571 LNDSTKAKIKGYKDVISKKQNXKSQAKLQPQETATNKTERDSTSKVSETDQGAKAGVGSN 392
LND + +I+ + V+ K+N K + +Q +E+ + ++ SK S++D + S+
Sbjct: 129 LNDRKRKQIENLQKVLKIKKNDKKKEDIQLKESEEAEKKKKKNSKDSQSDSSSSDSNSSD 188
Query: 391 EECQD 377
D
Sbjct: 189 SRSSD 193
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 469,741,894
Number of Sequences: 1393205
Number of extensions: 10255550
Number of successful extensions: 31681
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 28139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31353
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
