Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003417A_C01 KMC003417A_c01
(517 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T05942 cytochrome P450 82C1 - soybean gi|2739004|gb|AAB9459... 166 1e-40
ref|NP_194922.1| cytochrome p450, putative; protein id: At4g3194... 160 8e-39
ref|NP_194925.1| cytochrome p450 family; protein id: At4g31970.1... 160 1e-38
ref|NP_194923.1| cytochrome p450 family; protein id: At4g31950.1... 159 2e-38
pir||T04650 cytochrome P450 F10N7.240 - Arabidopsis thaliana 159 2e-38
>pir||T05942 cytochrome P450 82C1 - soybean gi|2739004|gb|AAB94590.1| CYP82C1p
[Glycine max]
Length = 532
Score = 166 bits (420), Expect = 1e-40
Identities = 78/112 (69%), Positives = 94/112 (83%)
Frame = -2
Query: 516 LVVNIWKIQRDPRIYEDPSAFKPERFLTSHGSLDVRGQNFELIPFGSGRRSCPGISFALQ 337
L+VN WKI RD R++ DP FKP RFLTSH +DV+GQN+EL+PFGSGRR+CPG S AL+
Sbjct: 419 LMVNAWKIHRDGRVWSDPHDFKPGRFLTSHKDVDVKGQNYELVPFGSGRRACPGASLALR 478
Query: 336 VLHLTLARLLHSFEFATPSNEVVDMTESPGLTIPKATPLEVLITPRLPAQLY 181
V+HLT+ARLLHSF A+PSN+VVDMTES GLT KATPLE+L+TPRL +LY
Sbjct: 479 VVHLTMARLLHSFNVASPSNQVVDMTESIGLTNLKATPLEILLTPRLDTKLY 530
>ref|NP_194922.1| cytochrome p450, putative; protein id: At4g31940.1 [Arabidopsis
thaliana] gi|7430661|pir||T04651 cytochrome P450
F10N7.250 - Arabidopsis thaliana
gi|2827641|emb|CAA16595.1| Cytochrome P450-like protein
[Arabidopsis thaliana] gi|7270098|emb|CAB79912.1|
Cytochrome P450-like protein [Arabidopsis thaliana]
Length = 524
Score = 160 bits (405), Expect = 8e-39
Identities = 75/113 (66%), Positives = 93/113 (81%), Gaps = 1/113 (0%)
Frame = -2
Query: 516 LVVNIWKIQRDPRIYEDPSAFKPERFLTSHGS-LDVRGQNFELIPFGSGRRSCPGISFAL 340
L+VN+WKIQRDP++Y +P+ F+PERF+T DVRGQNFEL+PFGSGRRSCPG S A+
Sbjct: 411 LIVNVWKIQRDPKVYMEPNEFRPERFITGEAKEFDVRGQNFELMPFGSGRRSCPGSSLAM 470
Query: 339 QVLHLTLARLLHSFEFATPSNEVVDMTESPGLTIPKATPLEVLITPRLPAQLY 181
QVLHL LAR LHSF+ T + VDM+E+PGLTIPKATPLEVLI+PR+ +L+
Sbjct: 471 QVLHLGLARFLHSFDVKTVMDMPVDMSENPGLTIPKATPLEVLISPRIKEELF 523
>ref|NP_194925.1| cytochrome p450 family; protein id: At4g31970.1 [Arabidopsis
thaliana] gi|7430659|pir||T04648 cytochrome P450
F10N7.220 - Arabidopsis thaliana
gi|2827638|emb|CAA16592.1| Cytochrome P450-like protein
[Arabidopsis thaliana] gi|7270101|emb|CAB79915.1|
Cytochrome P450-like protein [Arabidopsis thaliana]
Length = 523
Score = 160 bits (404), Expect = 1e-38
Identities = 77/113 (68%), Positives = 91/113 (80%), Gaps = 1/113 (0%)
Frame = -2
Query: 516 LVVNIWKIQRDPRIYEDPSAFKPERFLTSHGS-LDVRGQNFELIPFGSGRRSCPGISFAL 340
++VN+WKIQRDPR+Y +P+ F+PERF+T DVRGQNFEL+PFGSGRRSCPG S A+
Sbjct: 410 MLVNVWKIQRDPRVYMEPNEFRPERFITGEAKEFDVRGQNFELMPFGSGRRSCPGSSLAM 469
Query: 339 QVLHLTLARLLHSFEFATPSNEVVDMTESPGLTIPKATPLEVLITPRLPAQLY 181
QVLHL LAR L SF+ T + VDMTESPGLTIPKATPLE+LI+PRL LY
Sbjct: 470 QVLHLGLARFLQSFDVKTVMDMPVDMTESPGLTIPKATPLEILISPRLKEGLY 522
>ref|NP_194923.1| cytochrome p450 family; protein id: At4g31950.1 [Arabidopsis
thaliana] gi|25282583|pir||H85374 cytochrome P450-like
protein [imported] - Arabidopsis thaliana
gi|4678706|emb|CAA16594.2| cytochrome P450-like protein
[Arabidopsis thaliana] gi|7270099|emb|CAB79913.1|
cytochrome P450-like protein [Arabidopsis thaliana]
gi|23296518|gb|AAN13076.1| putative cytochrome P450
[Arabidopsis thaliana]
Length = 512
Score = 159 bits (401), Expect = 2e-38
Identities = 76/113 (67%), Positives = 91/113 (80%), Gaps = 1/113 (0%)
Frame = -2
Query: 516 LVVNIWKIQRDPRIYEDPSAFKPERFLTSHGS-LDVRGQNFELIPFGSGRRSCPGISFAL 340
L+VN+WKIQRDP++Y +P+ F+PERF+T DVRGQNFEL+PFGSGRRSCPG S A+
Sbjct: 399 LIVNVWKIQRDPKVYMEPNEFRPERFITGEAKDFDVRGQNFELMPFGSGRRSCPGPSLAM 458
Query: 339 QVLHLTLARLLHSFEFATPSNEVVDMTESPGLTIPKATPLEVLITPRLPAQLY 181
Q+LHL LAR LHSFE T + VDM+ESPGLTI KATPLEVLI PRL +L+
Sbjct: 459 QMLHLGLARFLHSFEVKTVLDRPVDMSESPGLTITKATPLEVLINPRLKRELF 511
>pir||T04650 cytochrome P450 F10N7.240 - Arabidopsis thaliana
Length = 501
Score = 159 bits (401), Expect = 2e-38
Identities = 76/113 (67%), Positives = 91/113 (80%), Gaps = 1/113 (0%)
Frame = -2
Query: 516 LVVNIWKIQRDPRIYEDPSAFKPERFLTSHGS-LDVRGQNFELIPFGSGRRSCPGISFAL 340
L+VN+WKIQRDP++Y +P+ F+PERF+T DVRGQNFEL+PFGSGRRSCPG S A+
Sbjct: 388 LIVNVWKIQRDPKVYMEPNEFRPERFITGEAKDFDVRGQNFELMPFGSGRRSCPGPSLAM 447
Query: 339 QVLHLTLARLLHSFEFATPSNEVVDMTESPGLTIPKATPLEVLITPRLPAQLY 181
Q+LHL LAR LHSFE T + VDM+ESPGLTI KATPLEVLI PRL +L+
Sbjct: 448 QMLHLGLARFLHSFEVKTVLDRPVDMSESPGLTITKATPLEVLINPRLKRELF 500
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 419,419,606
Number of Sequences: 1393205
Number of extensions: 8183090
Number of successful extensions: 22754
Number of sequences better than 10.0: 2573
Number of HSP's better than 10.0 without gapping: 20635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21052
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16154357632
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
