Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003413A_C01 KMC003413A_c01
(526 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193113.1| cytochrome p450 family; protein id: At4g13770.1... 38 0.063
gb|AAA79982.1| cytochrome p450 dependent monooxygenase 38 0.063
emb|CAB85635.1| putative ripening-related P-450 enzyme [Vitis vi... 35 0.41
pir||S35177 cytochrome P450 (clone 12) - Madagascar periwinkle ... 35 0.41
emb|CAB56741.1| cytochrome P450 monooxygenase [Cicer arietinum] 34 1.2
>ref|NP_193113.1| cytochrome p450 family; protein id: At4g13770.1, supported by cDNA:
gi_16226708, supported by cDNA: gi_18700183, supported
by cDNA: gi_20857339, supported by cDNA: gi_3164127,
supported by cDNA: gi_619744 [Arabidopsis thaliana]
gi|6166038|sp|P48421|C83A_ARATH Cytochrome P450 83A1
(CYPLXXXIII) gi|7430673|pir||T05246 cytochrome P450
monooxygenase [imported] - Arabidopsis thaliana
gi|2454176|gb|AAB71623.1| cytochrome P450 monooxygenase
[Arabidopsis thaliana] gi|3164128|dbj|BAA28532.1|
cytochrome P450 monooxygenase [Arabidopsis thaliana]
gi|4455306|emb|CAB36841.1| cytochrome P450 monooxygenase
(CYP83A1) [Arabidopsis thaliana]
gi|7268081|emb|CAB78419.1| cytochrome P450 monooxygenase
(CYP83A1) [Arabidopsis thaliana]
gi|16226709|gb|AAL16238.1|AF428469_1 AT4g13770/F18A5_160
[Arabidopsis thaliana] gi|18700184|gb|AAL77703.1|
AT4g13770/F18A5_160 [Arabidopsis thaliana]
gi|20857340|gb|AAM26713.1| AT4g13770/F18A5_160
[Arabidopsis thaliana]
Length = 502
Score = 38.1 bits (87), Expect = 0.063
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = -1
Query: 526 KLENGMKPEDMNLEDAIHGLALKKDESLRVIPIK 425
KL NGMKP+D+N+ D + GLA+ K + L+++P K
Sbjct: 466 KLPNGMKPDDINM-DVMTGLAMHKSQHLKLVPEK 498
>gb|AAA79982.1| cytochrome p450 dependent monooxygenase
Length = 502
Score = 38.1 bits (87), Expect = 0.063
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = -1
Query: 526 KLENGMKPEDMNLEDAIHGLALKKDESLRVIPIK 425
KL NGMKP+D+N+ D + GLA+ K + L+++P K
Sbjct: 466 KLPNGMKPDDINM-DVMTGLAMHKSQHLKLVPEK 498
>emb|CAB85635.1| putative ripening-related P-450 enzyme [Vitis vinifera]
Length = 499
Score = 35.4 bits (80), Expect = 0.41
Identities = 14/34 (41%), Positives = 28/34 (82%)
Frame = -1
Query: 526 KLENGMKPEDMNLEDAIHGLALKKDESLRVIPIK 425
KLE+G+ PE+MN+E+ +G++L+K + L+ +P++
Sbjct: 466 KLEDGVTPENMNMEER-YGISLQKAQPLQALPVR 498
>pir||S35177 cytochrome P450 (clone 12) - Madagascar periwinkle (fragment)
gi|395320|emb|CAA49439.1| cytochrome P450 [Catharanthus
roseus]
Length = 59
Score = 35.4 bits (80), Expect = 0.41
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = -1
Query: 526 KLENGMKPEDMNLEDAIHGLALKKDESLRVIPIK 425
KL++GMKPED+++E+ +GL L+ L VIP+K
Sbjct: 26 KLKDGMKPEDIDIEEK-YGLTLQLAVPLNVIPVK 58
>emb|CAB56741.1| cytochrome P450 monooxygenase [Cicer arietinum]
Length = 437
Score = 33.9 bits (76), Expect = 1.2
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -1
Query: 526 KLENGMKPEDMNLEDAIHGLALKKDESLRVIPIK 425
KLE+G+ ED N ED G+ L+K + +R++P K
Sbjct: 403 KLEDGLNVEDFNKEDEF-GITLEKSQPVRIVPTK 435
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 429,258,681
Number of Sequences: 1393205
Number of extensions: 8678896
Number of successful extensions: 21423
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 20061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21336
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17019769648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
