Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003381A_C01 KMC003381A_c01
(410 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC20768.1| putative cell death associated protein [Oryza sa... 33 0.84
dbj|BAB44069.1| P0030H07.39 [Oryza sativa (japonica cultivar-gro... 33 1.1
ref|NP_011854.1| bZIP protein; transcription factor; Yap3p [Sacc... 32 1.9
gb|AAO24912.1| putative esterase [Oryza sativa (japonica cultiva... 32 1.9
dbj|BAB44059.1| P0030H07.24 [Oryza sativa (japonica cultivar-gro... 30 5.4
>dbj|BAC20768.1| putative cell death associated protein [Oryza sativa (japonica
cultivar-group)]
Length = 330
Score = 33.1 bits (74), Expect = 0.84
Identities = 16/29 (55%), Positives = 18/29 (61%)
Frame = -1
Query: 410 RAKDYTMRLKNWGKDIEYVEFEGQQTWVF 324
RA DY RL GK +E +EFEGQQ F
Sbjct: 270 RALDYAARLAAMGKPVEALEFEGQQHGFF 298
>dbj|BAB44069.1| P0030H07.39 [Oryza sativa (japonica cultivar-group)]
gi|15528617|dbj|BAB64638.1| P0011G08.9 [Oryza sativa
(japonica cultivar-group)]
Length = 322
Score = 32.7 bits (73), Expect = 1.1
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1
Query: 410 RAKDYTMRLKNWGKDIEYVEFEGQQ 336
R DY RLK GK +E EFEG+Q
Sbjct: 283 RVVDYAARLKEMGKAVELAEFEGEQ 307
>ref|NP_011854.1| bZIP protein; transcription factor; Yap3p [Saccharomyces
cerevisiae] gi|731593|sp|P38749|YHA9_YEAST Hypothetical
38.0 kDa protein in PRPS4-STE20 intergenic region
gi|626566|pir||S46819 hypothetical protein YHL009c -
yeast (Saccharomyces cerevisiae)
gi|508677|gb|AAB69745.1| Yhl009cp [Saccharomyces
cerevisiae]
Length = 330
Score = 32.0 bits (71), Expect = 1.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2
Query: 352 NLKDNKPGFFTYLNPQFGTLKEVECCSSNTIHRE 251
N+ DN GF ++NPQ +E +CC N++ +E
Sbjct: 5 NMDDNTSGFMKFINPQ---CQEEDCCIRNSLFQE 35
>gb|AAO24912.1| putative esterase [Oryza sativa (japonica cultivar-group)]
Length = 342
Score = 32.0 bits (71), Expect = 1.9
Identities = 15/29 (51%), Positives = 17/29 (57%)
Frame = -1
Query: 410 RAKDYTMRLKNWGKDIEYVEFEGQQTWVF 324
R DY RL+ GK +E VEFEGQ F
Sbjct: 278 RDVDYAARLRAMGKQVEMVEFEGQHHGFF 306
>dbj|BAB44059.1| P0030H07.24 [Oryza sativa (japonica cultivar-group)]
Length = 361
Score = 30.4 bits (67), Expect = 5.4
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -1
Query: 410 RAKDYTMRLKNWGKDIEYVEFEGQQ 336
R Y RLK GK +E VEFEG Q
Sbjct: 304 RVVGYAARLKEMGKAVELVEFEGAQ 328
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 334,725,509
Number of Sequences: 1393205
Number of extensions: 6268275
Number of successful extensions: 11748
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11747
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 7023606888
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
