Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003360A_C01 KMC003360A_c01
(614 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA67554.1| protein kinase [Trifolium repens] 221 6e-57
sp|P51137|MSK1_MEDSA Glycogen synthase kinase-3 homolog MsK-1 gi... 216 2e-55
gb|AAM62970.1| shaggy related protein kinase ASK-GAMMA [Arabidop... 211 8e-54
ref|NP_187235.1| shaggy related protein kinase, ASK-GAMMA; prote... 211 8e-54
ref|NP_568486.1| shaggy-like kinase alpha; protein id: At5g26751... 208 4e-53
>emb|CAA67554.1| protein kinase [Trifolium repens]
Length = 341
Score = 221 bits (563), Expect = 6e-57
Identities = 101/109 (92%), Positives = 104/109 (94%)
Frame = -1
Query: 614 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALDALTHPFFDEL 435
MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC ALDALTHPFFDEL
Sbjct: 233 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCQALDALTHPFFDEL 292
Query: 434 REPSTRLPTGRFLPPLFNFKSHELKGVPAEILVKLVPEHARKQCPFLGL 288
R+P+ RLPTGRFLPPLFNFK HELKG+P E LVKLVPEHARKQCPFLGL
Sbjct: 293 RDPNARLPTGRFLPPLFNFKPHELKGIPVETLVKLVPEHARKQCPFLGL 341
>sp|P51137|MSK1_MEDSA Glycogen synthase kinase-3 homolog MsK-1 gi|481020|pir||S37644
protein kinase MSK-1 (EC 2.7.1.-) [similarity] - alfalfa
gi|313144|emb|CAA48474.1| protein kinase [Medicago
sativa]
Length = 411
Score = 216 bits (549), Expect = 2e-55
Identities = 99/109 (90%), Positives = 102/109 (92%)
Frame = -1
Query: 614 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALDALTHPFFDEL 435
MNPNYTEFKFPQIKAHPWHKIFHKRMP EAVDLVSRLLQYSPNLRC ALD LTHPFFDEL
Sbjct: 303 MNPNYTEFKFPQIKAHPWHKIFHKRMPAEAVDLVSRLLQYSPNLRCQALDCLTHPFFDEL 362
Query: 434 REPSTRLPTGRFLPPLFNFKSHELKGVPAEILVKLVPEHARKQCPFLGL 288
R+P+ RLPTGRFLPPLFNFK HELKGVP E L+KLVPEHARKQCPFLGL
Sbjct: 363 RDPNARLPTGRFLPPLFNFKPHELKGVPVETLMKLVPEHARKQCPFLGL 411
>gb|AAM62970.1| shaggy related protein kinase ASK-GAMMA [Arabidopsis thaliana]
Length = 409
Score = 211 bits (536), Expect = 8e-54
Identities = 95/109 (87%), Positives = 101/109 (92%)
Frame = -1
Query: 614 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALDALTHPFFDEL 435
MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC ALD+L HPFFDEL
Sbjct: 301 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCAALDSLVHPFFDEL 360
Query: 434 REPSTRLPTGRFLPPLFNFKSHELKGVPAEILVKLVPEHARKQCPFLGL 288
R+P+ RLP GRFLPPLFNFK HELKGVP E++ KLVPEHARKQCP+L L
Sbjct: 361 RDPNARLPNGRFLPPLFNFKPHELKGVPVEMVAKLVPEHARKQCPWLSL 409
>ref|NP_187235.1| shaggy related protein kinase, ASK-GAMMA; protein id: At3g05840.1,
supported by cDNA: 17739., supported by cDNA:
gi_17065273, supported by cDNA: gi_20259997 [Arabidopsis
thaliana] gi|1170714|sp|P43289|KSGG_ARATH Shaggy-related
protein kinase gamma (ASK-gamma) gi|541850|pir||S41597
protein kinase ASK-gamma (EC 2.7.1.-) [similarity] -
Arabidopsis thaliana gi|456509|emb|CAA53180.1| ASK-gamma
(Arabidopsis shaggy-related kinase) [Arabidopsis
thaliana] gi|2059329|emb|CAA73247.1| shaggy-like kinase
gamma [Arabidopsis thaliana]
gi|6714397|gb|AAF26086.1|AC012393_12 shaggy related
protein kinase, ASK-GAMMA [Arabidopsis thaliana]
gi|17065274|gb|AAL32791.1| shaggy related protein
kinase, ASK-GAMMA [Arabidopsis thaliana]
gi|20259998|gb|AAM13346.1| shaggy related protein
kinase, ASK-GAMMA [Arabidopsis thaliana]
Length = 409
Score = 211 bits (536), Expect = 8e-54
Identities = 95/109 (87%), Positives = 101/109 (92%)
Frame = -1
Query: 614 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALDALTHPFFDEL 435
MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC ALD+L HPFFDEL
Sbjct: 301 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCAALDSLVHPFFDEL 360
Query: 434 REPSTRLPTGRFLPPLFNFKSHELKGVPAEILVKLVPEHARKQCPFLGL 288
R+P+ RLP GRFLPPLFNFK HELKGVP E++ KLVPEHARKQCP+L L
Sbjct: 361 RDPNARLPNGRFLPPLFNFKPHELKGVPVEMVAKLVPEHARKQCPWLSL 409
>ref|NP_568486.1| shaggy-like kinase alpha; protein id: At5g26751.1, supported by
cDNA: gi_15028148, supported by cDNA: gi_16226767
[Arabidopsis thaliana] gi|27735207|sp|P43288|KSGA_ARATH
Shaggy-related protein kinase alpha (ASK-alpha)
gi|15028149|gb|AAK76698.1| putative shaggy kinase alpha
[Arabidopsis thaliana]
gi|16226768|gb|AAL16257.1|AF428327_1 AT5g26750/F2P16_10
[Arabidopsis thaliana] gi|23296760|gb|AAN13164.1|
putative shaggy kinase alpha [Arabidopsis thaliana]
Length = 405
Score = 208 bits (530), Expect = 4e-53
Identities = 95/109 (87%), Positives = 100/109 (91%)
Frame = -1
Query: 614 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALDALTHPFFDEL 435
MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR ALD L HPFFDEL
Sbjct: 297 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRSAALDTLVHPFFDEL 356
Query: 434 REPSTRLPTGRFLPPLFNFKSHELKGVPAEILVKLVPEHARKQCPFLGL 288
R+P+ RLP GRFLPPLFNFK HELKGVP E++ KLVPEHARKQCP+LGL
Sbjct: 357 RDPNARLPNGRFLPPLFNFKPHELKGVPLEMVAKLVPEHARKQCPWLGL 405
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 556,423,389
Number of Sequences: 1393205
Number of extensions: 12247215
Number of successful extensions: 33568
Number of sequences better than 10.0: 947
Number of HSP's better than 10.0 without gapping: 32411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33509
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24854530794
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
